Variant report

Variant nsv528447
Chromosome Location chr17:50323521-51118173
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:365 , 50 per page) page: 1 2 3 4 5 6 7 8
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:50325800-50328200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr17:50332200-50333400 Enhancers HUES48 Cell Line embryonic stem cell
3 chr17:50332400-50333400 Enhancers H9 Cell Line embryonic stem cell
4 chr17:50332800-50333600 Enhancers iPS-18 Cell Line embryonic stem cell
5 chr17:50333000-50333600 Enhancers iPS-15b Cell Line embryonic stem cell
6 chr17:50333200-50333600 Enhancers ES-I3 Cell Line embryonic stem cell
7 chr17:50354200-50354800 Enhancers Fetal Brain Male brain
8 chr17:50356600-50356800 Enhancers Fetal Brain Male brain
9 chr17:50369600-50370400 Enhancers Adipose Nuclei Adipose
10 chr17:50402200-50402400 Bivalent Enhancer Liver Liver
11 chr17:50403000-50403200 Enhancers Right Atrium heart
12 chr17:50414800-50415400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
13 chr17:50415400-50415600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
14 chr17:50415600-50416800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
15 chr17:50416600-50417000 Enhancers Breast Myoepithelial Primary Cells Breast
16 chr17:50416800-50417000 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
17 chr17:50448600-50449000 Enhancers ES-I3 Cell Line embryonic stem cell
18 chr17:50448600-50449000 Enhancers iPS-15b Cell Line embryonic stem cell
19 chr17:50448600-50449000 Enhancers Rectal Mucosa Donor 29 rectum
20 chr17:50453600-50454000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
21 chr17:50454800-50456000 Enhancers Stomach Mucosa stomach
22 chr17:50455800-50456000 Enhancers Gastric stomach
23 chr17:50455800-50456600 Enhancers Rectal Mucosa Donor 31 rectum
24 chr17:50456000-50456800 Weak transcription Stomach Mucosa stomach
25 chr17:50456000-50457000 Weak transcription Gastric stomach
26 chr17:50456200-50457600 Enhancers HepG2 liver
27 chr17:50456600-50461400 Weak transcription Rectal Mucosa Donor 31 rectum
28 chr17:50456800-50457600 Enhancers Stomach Mucosa stomach
29 chr17:50457000-50457600 Enhancers Gastric stomach
30 chr17:50457000-50457800 Enhancers Pancreas Pancrea
31 chr17:50457600-50466600 Weak transcription Stomach Mucosa stomach
32 chr17:50460800-50461400 Enhancers ES-I3 Cell Line embryonic stem cell
33 chr17:50460800-50461400 Enhancers Brain Hippocampus Middle brain
34 chr17:50461000-50461400 Enhancers Psoas Muscle Psoas
35 chr17:50461400-50462000 Enhancers Rectal Mucosa Donor 31 rectum
36 chr17:50463000-50463400 Enhancers Cortex derived primary cultured neurospheres brain
37 chr17:50466000-50466800 Enhancers Duodenum Mucosa Duodenum
38 chr17:50466200-50466800 Enhancers Rectal Mucosa Donor 31 rectum
39 chr17:50466400-50467200 Enhancers Aorta Aorta
40 chr17:50466600-50467000 Enhancers Stomach Mucosa stomach
41 chr17:50466800-50467000 Flanking Active TSS Duodenum Mucosa Duodenum
42 chr17:50466800-50467000 Enhancers Ovary ovary
43 chr17:50466800-50467000 Flanking Active TSS Rectal Mucosa Donor 31 rectum
44 chr17:50466800-50467200 Active TSS Rectal Mucosa Donor 29 rectum
45 chr17:50467000-50467400 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
46 chr17:50467000-50467400 Active TSS Duodenum Smooth Muscle Duodenum
47 chr17:50467000-50467600 Active TSS Duodenum Mucosa Duodenum
48 chr17:50467000-50467600 Active TSS Ovary ovary
49 chr17:50467000-50467600 Active TSS Rectal Mucosa Donor 31 rectum
50 chr17:50467000-50467800 Active TSS Stomach Mucosa stomach

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