Variant report

Variant	nsv529219
Chromosome Location	chr3:117735-270708
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:460)
CpG islands
(count:1222)
Chromatin interactive
region (count:10)
LncRNA
region (count:27)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:460 , 50 per page) page: 1 2 3 4 5 6 7 ... 10

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF1	chr3:128118-128267	K562	blood:	n/a	n/a
2	ATF2	chr3:254017-254518	GM12878	blood:	n/a	n/a
3	ATF2	chr3:254098-254530	GM12878	blood:	n/a	n/a
4	BACH1	chr3:238826-240389	H1-hESC	embryonic stem cell:	n/a	n/a
5	BACH1	chr3:165624-165661	H1-hESC	embryonic stem cell:	n/a	n/a
6	BACH1	chr3:238302-238499	H1-hESC	embryonic stem cell:	n/a	n/a
7	BATF	chr3:166548-166773	GM12878	blood:	n/a	chr3:166679-166690 chr3:166653-166662
8	BATF	chr3:259675-259847	GM12878	blood:	n/a	n/a
9	BATF	chr3:166561-166841	GM12878	blood:	n/a	chr3:166679-166690 chr3:166653-166662
10	BATF	chr3:254085-254416	GM12878	blood:	n/a	n/a
11	BHLHE40	chr3:260829-261058	GM12878	blood:	n/a	n/a
12	BHLHE40	chr3:260263-260618	GM12878	blood:	n/a	n/a
13	BHLHE40	chr3:152996-153196	A549	lung:	n/a	n/a
14	BHLHE40	chr3:150637-150664	A549	lung:	n/a	n/a
15	CCNT2	chr3:210502-210583	K562	blood:	n/a	n/a
16	CCNT2	chr3:238979-239034	K562	blood:	n/a	n/a
17	CEBPB	chr3:137940-138307	HepG2	liver:	n/a	chr3:138113-138124 chr3:138111-138128
18	CEBPB	chr3:219216-219513	HepG2	liver:	n/a	n/a
19	CEBPB	chr3:215234-215549	HepG2	liver:	n/a	chr3:215398-215409 chr3:215397-215410
20	CEBPB	chr3:216138-216415	Hela-S3	cervix:	n/a	chr3:216322-216333 chr3:216301-216314 chr3:216321-216334 chr3:216302-216313
21	CEBPB	chr3:244050-244226	H1-hESC	embryonic stem cell:	n/a	chr3:244109-244120
22	CEBPB	chr3:242454-242771	H1-hESC	embryonic stem cell:	n/a	n/a
23	CEBPB	chr3:242488-242808	A549	lung:	n/a	n/a
24	CEBPB	chr3:215306-215533	K562	blood:	n/a	chr3:215398-215409 chr3:215397-215410
25	CEBPB	chr3:162469-162671	A549	lung:	n/a	n/a
26	CEBPB	chr3:157527-157838	HepG2	liver:	n/a	chr3:157561-157572 chr3:157692-157703
27	CEBPB	chr3:219203-219482	A549	lung:	n/a	n/a
28	CEBPB	chr3:243976-244300	IMR90	lung:	n/a	chr3:244109-244120
29	CEBPB	chr3:130437-130508	A549	lung:	n/a	n/a
30	CEBPB	chr3:242447-242817	IMR90	lung:	n/a	n/a
31	CEBPB	chr3:211035-211283	HepG2	liver:	n/a	n/a
32	CEBPB	chr3:169853-170053	A549	lung:	n/a	n/a
33	CEBPB	chr3:243974-244307	A549	lung:	n/a	chr3:244109-244120
34	CEBPB	chr3:242440-242811	HepG2	liver:	n/a	n/a
35	CEBPB	chr3:157534-157826	IMR90	lung:	n/a	chr3:157561-157572 chr3:157692-157703
36	CEBPB	chr3:215340-215517	A549	lung:	n/a	chr3:215398-215409 chr3:215397-215410
37	CEBPB	chr3:243949-244303	HepG2	liver:	n/a	chr3:244109-244120
38	CEBPB	chr3:242500-242742	K562	blood:	n/a	n/a
39	CEBPB	chr3:216135-216492	A549	lung:	n/a	chr3:216322-216333 chr3:216301-216314 chr3:216321-216334 chr3:216302-216313
40	CEBPB	chr3:216151-216444	HepG2	liver:	n/a	chr3:216322-216333 chr3:216301-216314 chr3:216321-216334 chr3:216302-216313
41	CHD1	chr3:239582-239589	GM12878	blood:	n/a	n/a
42	CHD1	chr3:238324-238476	H1-hESC	embryonic stem cell:	n/a	n/a
43	CHD1	chr3:239219-239240	H1-hESC	embryonic stem cell:	n/a	n/a
44	CHD1	chr3:195466-195490	GM12878	blood:	n/a	n/a
45	CHD2	chr3:166635-166663	GM12878	blood:	n/a	n/a
46	CHD2	chr3:238225-238590	GM12878	blood:	n/a	n/a
47	CREB1	chr3:254049-254528	GM12878	blood:	n/a	n/a
48	CTBP2	chr3:238125-240202	H1-hESC	embryonic stem cell:	n/a	n/a
49	CTCF	chr3:249740-249890	GM06990	blood:	n/a	n/a
50	CTCF	chr3:239520-239670	GM12873	blood:	n/a	n/a

(count:1222 , 50 per page) page: 1 2 3 4 5 6 7 ... 25

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr3:238161-238211	BJ	skin:	n/a
2	chr3:236078-236128	A549	lung:	n/a
3	chr3:238161-238211	BJ	skin:	n/a
4	chr3:236078-236128	A549	lung:	n/a
5	chr3:238611-238661	GM12892	blood:	n/a
6	chr3:241182-241232	ovcar-3	ovarian:	n/a
7	chr3:238048-238098	ECC-1	luminal epithelium:	n/a
8	chr3:238496-238546	AoSMC	blood vessel:	n/a
9	chr3:243996-244046	NHBE	bronchial:	n/a
10	chr3:238048-238098	Caco-2	colon:	n/a
11	chr3:238618-238668	AG04449	skin:	fetal
12	chr3:243996-244046	SAEC	small airway:	n/a
13	chr3:238611-238661	SAEC	small airway:	n/a
14	chr3:239229-239279	SK-N-MC	brain:	n/a
15	chr3:239188-239238	HCF	heart:	n/a
16	chr3:239207-239257	GM12892	blood:	n/a
17	chr3:239733-239783	NT2-D1	testis:	n/a
18	chr3:238611-238661	PFSK-1	brain:	n/a
19	chr3:241182-241232	A549	lung:	n/a
20	chr3:238161-238211	MCF10A-Er-Src	breast:	n/a
21	chr3:153242-153292	AoSMC	blood vessel:	n/a
22	chr3:243996-244046	HepG2	liver:	n/a
23	chr3:238161-238211	HMEC	breast:	n/a
24	chr3:238931-238981	PFSK-1	brain:	n/a
25	chr3:238392-238442	HCT-116	colon:	n/a
26	chr3:238318-238368	NB4	blood:	n/a
27	chr3:238161-238211	HepG2	liver:	n/a
28	chr3:241182-241232	HRE	kidney:	n/a
29	chr3:238392-238442	T-47D	breast:	n/a
30	chr3:240139-240189	AG10803	skin:	n/a
31	chr3:239506-239556	GM12878	blood:	n/a
32	chr3:239229-239279	MCF10A-Er-Src	breast:	n/a
33	chr3:243996-244046	LNCaP	prostate:	n/a
34	chr3:238931-238981	HCPEpiC	choroid plexus:	n/a
35	chr3:238161-238211	HCPEpiC	choroid plexus:	n/a
36	chr3:238611-238661	HCPEpiC	choroid plexus:	n/a
37	chr3:243996-244046	Hela-S3	cervix:	n/a
38	chr3:238318-238368	Hepatocyte	liver:	n/a
39	chr3:238618-238668	U87	brain:	n/a
40	chr3:238931-238981	MCF10A-Er-Src	breast:	n/a
41	chr3:238048-238098	BE2_C	brain:	n/a
42	chr3:238161-238211	AG09309	skin:	n/a
43	chr3:239665-239715	NHBE	bronchial:	n/a
44	chr3:153242-153292	LNCaP	prostate:	n/a
45	chr3:240139-240189	PANC-1	pancreas:	n/a
46	chr3:238618-238668	NHBE	bronchial:	n/a
47	chr3:153242-153292	Hela-S3	cervix:	n/a
48	chr3:240139-240189	BJ	skin:	n/a
49	chr3:153242-153292	HCF	heart:	n/a
50	chr3:238496-238546	BJ	skin:	n/a

(count:10 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr3:131415..134151-chr3:136022..137906,2	MCF-7	breast:
2	chr3:217250..219144-chr3:222760..225297,2	MCF-7	breast:
3	chr3:169328..170327-chr3:184848..185564,2	MCF-7	breast:
4	chr3:169328..170327-chr3:184848..185564,2	MCF-7	breast:
5	chr3:188824..190368-chr3:386265..388997,2	MCF-7	breast:
6	chr11:73160067..73160822-chr3:118894..119482,2	MCF-7	breast:
7	chr3:217250..219144-chr3:222760..225297,2	MCF-7	breast:
8	chr3:131415..134151-chr3:136022..137906,2	MCF-7	breast:
9	chr3:163984..165661-chr3:172610..174560,2	K562	blood:
10	chr3:163984..165661-chr3:172610..174560,2	K562	blood:

(count:27 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-IL5RA-6	chr3:237540-237597	NONHSAT087559
2	lnc-IL5RA-16	chr3:157540-157624	NONHSAT087555
3	lnc-IL5RA-16	chr3:172879-173007	NONHSAT087554
4	lnc-IL5RA-6	chr3:237679-237723	ENSG00000224318.1
5	lnc-CNTN6-7	chr3:239697-239775	NONHSAT087562
6	lnc-IL5RA-6	chr3:238139-238191	ENSG00000224318.1
7	lnc-IL5RA-17	chr3:147879-148034	l_2301_chr3:147013-148034_heart
8	lnc-IL5RA-6	chr3:237679-237723	ENSG00000224318.1
9	lnc-IL5RA-6	chr3:238650-238882	ENSG00000224318.1
10	lnc-IL5RA-6	chr3:237441-237597	ENSG00000224318.1
11	lnc-IL5RA-6	chr3:238139-238191	ENSG00000224318.1
12	lnc-IL5RA-6	chr3:237679-237723	NONHSAT087559
13	lnc-IL5RA-6	chr3:238290-238385	ENSG00000224318.1
14	lnc-IL5RA-6	chr3:238650-239024	ENSG00000224318.1
15	lnc-CNTN6-7	chr3:238454-238746	NONHSAT087560
16	lnc-IL5RA-6	chr3:237679-237723	ENSG00000224318.1
17	lnc-IL5RA-16	chr3:153927-154143	NONHSAT087555
18	lnc-CNTN6-7	chr3:254887-255362	NONHSAT087562
19	lnc-IL5RA-6	chr3:238139-238191	ENSG00000224318.1
20	lnc-CNTN6-7	chr3:239326-239775	NONHSAT087561
21	lnc-IL5RA-16	chr3:157540-157620	NONHSAT087554
22	lnc-IL5RA-6	chr3:237441-237597	ENSG00000224318.1
23	lnc-IL5RA-6	chr3:238139-238386	NONHSAT087559
24	lnc-IL5RA-16	chr3:153782-154143	NONHSAT087554
25	lnc-IL5RA-6	chr3:237441-237597	ENSG00000224318.1
26	lnc-IL5RA-6	chr3:238290-238542	ENSG00000224318.1
27	lnc-IL5RA-17	chr3:147014-147245	l_2301_chr3:147013-148034_heart

No data

Variant related genes	Relation type
CHL1-AS2	TF binding region
CHL1	TF binding region
CHL1-AS2	CpG island
CHL1	CpG island

Extended variants
information (count: 5047 )
Associated
traits (count: 90 )

Variant overlapped rSNPs/rCNVs (count:5047 , 50 per page) page: 1 2 3 4 5 6 7 ... 101

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs534344334	chr3:117741-117742	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs552564891	chr3:117797-117798	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs574055131	chr3:117841-117842	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs190732900	chr3:117844-117845	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs556974020	chr3:117849-117850	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs199835224	chr3:117858-117859	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs9968126	chr3:117882-117883	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
8	rs73013020	chr3:117929-117930	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs112835943	chr3:117970-117971	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs569907701	chr3:117980-117981	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs530823834	chr3:118013-118014	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs377198987	chr3:118015-118016	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs541500241	chr3:118027-118028	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs74994539	chr3:118035-118036	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs530068284	chr3:118046-118047	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs187939059	chr3:118057-118058	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs141250593	chr3:118083-118084	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs552474002	chr3:118089-118090	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs34512897	chr3:118107-118108	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
20	rs12633924	chr3:118118-118119	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
21	rs552603510	chr3:118147-118148	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs73094889	chr3:118198-118199	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs553004159	chr3:118207-118208	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs535097024	chr3:118213-118214	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs142004082	chr3:118219-118220	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs575429686	chr3:118255-118256	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs568040308	chr3:118279-118280	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs192678215	chr3:118286-118287	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs557686426	chr3:118306-118307	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs573031316	chr3:118328-118329	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs182787596	chr3:118349-118350	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs535569942	chr3:118352-118353	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs557121818	chr3:118354-118355	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs77836432	chr3:118364-118365	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs575478254	chr3:118390-118391	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs17045236	chr3:118421-118422	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
37	rs558036000	chr3:118427-118428	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs541842240	chr3:118442-118443	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs564036547	chr3:118447-118448	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs531131401	chr3:118489-118490	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs74734990	chr3:118497-118498	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs564344073	chr3:118554-118555	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs73094890	chr3:118567-118568	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs138882602	chr3:118568-118569	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs373448871	chr3:118575-118576	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs540245436	chr3:118582-118583	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs116717771	chr3:118604-118605	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs376244528	chr3:118611-118612	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs149413769	chr3:118635-118636	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs564036846	chr3:118640-118641	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:90)

Disease	PMID	Source
Cancer	20164920	CNVD
Lung cancer	16618734	CNVD
Autism	18349135	CNVD
Breast cancer	20409316	CNVD
Myelofibrosis	22110671	CNVD
Autism	22241247	CNVD
Intellectual disability	22045946	CNVD
Squamous cell cancer	19607727	CNVD
Gastric adenocarcinoma	19115996	CNVD
sporadic birth defects	19047251	CNVD
Mental retardation	17124404	CNVD
abnormal development	18461090	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Sudden cardiac death	19188705	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Ovarian cancer	21720365	CNVD
Neuroblastoma	18923191	CNVD
Papillary thyroid carcinoma	21436994	CNVD
Biliary cancer	19435499	CNVD
Medulloblastoma	21979893	CNVD
Esophageal squamous carcinoma	18405350	CNVD
Breast cancer	17603634	CNVD
Neuroblastoma	17327916	CNVD
Glioblastoma multiforme	21080181	CNVD
Colorectal cancer	21297112	CNVD
Lynch syndrome	18415027	CNVD
Renal cell carcinoma	18592004	CNVD
Acute myeloid leukemia	20729466	CNVD
Urothelial carcinoma	18382360	CNVD
Melanoma	18172304	CNVD
Cervical cancer	21062161	CNVD
Hirschsprung''s Disease	21712996	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Insulin resistance	16721378	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Ewing''s sarcoma	21437220	CNVD
Neuroblastoma	21484798	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Oral cancer	19627613	CNVD
Renal cell carcinoma	19461508	CNVD
Epithelial cancer	22065749	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Acute myeloid leukemia	16864856	CNVD
Liposarcoma	21253554	CNVD
Basal cell lymphoma	21115979	CNVD
Endometrial cancer	22040021	CNVD
Pancreatic endocrine tumor	20981439	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	17387387	CNVD
Oral cancer	21386901	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Basal cell lymphoma	17053054	CNVD
Esophageal cancer	21851588	CNVD
Uveal melanoma	21693616	CNVD
Retinoblastoma	21504564	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	21364760	CNVD
Schizophrenia	20967226	CNVD
Autism	22543975	CNVD
Attention deficit hyperactivity disorder	19546859	CNVD
Ependymoma	20639864	CNVD
lymphocytic leukemia	21291569	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Non-syndromic sensorineural hearing loss	17289997	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Renal cell carcinoma	21668985	CNVD
Tetralogy of Fallot	22912587	CNVD
early-passage human iPS cells	21368824	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Autism	22495311	CNVD
Autism	20685689	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Non-syndromic sensorineural hearing loss	19587683	CNVD
Melanoma	20877625	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Multiple myeloma	17550852	CNVD
Prostate cancer	18632612	CNVD
Thoracic aortic aneurysm	21092924	CNVD

Chromatin state (count:611 , 50 per page) page: 1 2 3 4 5 6 7 ... 13

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:113000-118000	Enhancers	Brain Germinal Matrix	brain
2	chr3:113400-118000	Enhancers	Fetal Lung	lung
3	chr3:113800-118200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr3:115600-123600	Weak transcription	Fetal Brain Male	brain
5	chr3:117000-118000	Weak transcription	Rectal Smooth Muscle	rectum
6	chr3:117200-117800	Enhancers	Fetal Brain Female	brain
7	chr3:117200-118000	Weak transcription	Colon Smooth Muscle	Colon
8	chr3:117200-124600	Weak transcription	Ovary	ovary
9	chr3:117600-118000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
10	chr3:118000-118200	Enhancers	Colon Smooth Muscle	Colon
11	chr3:118000-118400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
12	chr3:118200-118400	Enhancers	Rectal Smooth Muscle	rectum
13	chr3:123600-123800	Enhancers	Fetal Brain Male	brain
14	chr3:123600-125800	Enhancers	Brain Germinal Matrix	brain
15	chr3:125000-125200	Enhancers	Small Intestine	intestine
16	chr3:129600-130600	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
17	chr3:135400-136000	Enhancers	Cortex derived primary cultured neurospheres	brain
18	chr3:136000-139000	Weak transcription	Cortex derived primary cultured neurospheres	brain
19	chr3:137600-138200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
20	chr3:138000-138200	Enhancers	HUES6 Cell Line	embryonic stem cell
21	chr3:138000-138400	Enhancers	HepG2	liver
22	chr3:138000-138600	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
23	chr3:138200-141000	Enhancers	Brain Germinal Matrix	brain
24	chr3:138200-144200	Weak transcription	HUES6 Cell Line	embryonic stem cell
25	chr3:138600-144800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
26	chr3:139000-140000	Enhancers	HUES48 Cell Line	embryonic stem cell
27	chr3:139000-140000	ZNF genes & repeats	HUES64 Cell Line	embryonic stem cell
28	chr3:139000-140000	Enhancers	iPS-18 Cell Line	embryonic stem cell
29	chr3:139000-140800	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
30	chr3:139000-143000	Enhancers	Cortex derived primary cultured neurospheres	brain
31	chr3:139200-139600	Enhancers	ES-I3 Cell Line	embryonic stem cell
32	chr3:139200-139600	Enhancers	iPS-20b Cell Line	embryonic stem cell
33	chr3:139200-139800	Enhancers	iPS-15b Cell Line	embryonic stem cell
34	chr3:139200-140200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
35	chr3:139200-140200	Enhancers	Fetal Brain Female	brain
36	chr3:139200-140400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
37	chr3:139200-141800	Enhancers	Fetal Brain Male	brain
38	chr3:139200-142800	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
39	chr3:139200-143800	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
40	chr3:139400-141400	Enhancers	Brain Anterior Caudate	brain
41	chr3:139600-139800	Enhancers	Brain Hippocampus Middle	brain
42	chr3:139600-140400	Enhancers	Adipose Nuclei	Adipose
43	chr3:139600-142000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
44	chr3:139600-144000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
45	chr3:139800-142200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
46	chr3:140000-140400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
47	chr3:140000-141000	Weak transcription	Brain Hippocampus Middle	brain
48	chr3:140000-141200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
49	chr3:140000-143000	Weak transcription	HUES48 Cell Line	embryonic stem cell
50	chr3:140200-141000	Weak transcription	Fetal Brain Female	brain

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