Variant report
Variant | nsv529602 |
---|---|
Chromosome Location | chr3:60088353-60830769 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:3543)
- CpG islands (count:1223)
- Chromatin interactive region (count:182)
- LncRNA region (count:4)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | ARID3A | chr3:60262560-60263903 | K562 | blood: | n/a | n/a |
2 | ARID3A | chr3:60279912-60280134 | K562 | blood: | n/a | n/a |
3 | ARID3A | chr3:60089333-60089791 | K562 | blood: | n/a | n/a |
4 | ARID3A | chr3:60267195-60267326 | K562 | blood: | n/a | n/a |
5 | ARID3A | chr3:60293583-60293982 | K562 | blood: | n/a | n/a |
6 | ARID3A | chr3:60236266-60236623 | K562 | blood: | n/a | n/a |
7 | ARID3A | chr3:60283834-60284419 | K562 | blood: | n/a | n/a |
8 | ARID3A | chr3:60275766-60275781 | K562 | blood: | n/a | n/a |
9 | ARID3A | chr3:60416988-60417601 | K562 | blood: | n/a | n/a |
10 | ARID3A | chr3:60251876-60252792 | K562 | blood: | n/a | n/a |
11 | ARID3A | chr3:60438400-60438401 | K562 | blood: | n/a | n/a |
12 | ARID3A | chr3:60682959-60683275 | HepG2 | liver: | n/a | n/a |
13 | ARID3A | chr3:60241988-60242170 | K562 | blood: | n/a | n/a |
14 | ARID3A | chr3:60311515-60311838 | K562 | blood: | n/a | n/a |
15 | ARID3A | chr3:60399818-60400018 | K562 | blood: | n/a | n/a |
16 | ARID3A | chr3:60228798-60230202 | K562 | blood: | n/a | n/a |
17 | ARID3A | chr3:60254542-60255635 | K562 | blood: | n/a | n/a |
18 | ARID3A | chr3:60826899-60827442 | HepG2 | liver: | n/a | n/a |
19 | ARID3A | chr3:60438633-60438818 | HepG2 | liver: | n/a | n/a |
20 | ATF1 | chr3:60175649-60176121 | K562 | blood: | n/a | n/a |
21 | ATF1 | chr3:60262559-60263531 | K562 | blood: | n/a | n/a |
22 | ATF1 | chr3:60255066-60255423 | K562 | blood: | n/a | n/a |
23 | ATF2 | chr3:60490547-60490897 | GM12878 | blood: | n/a | n/a |
24 | ATF2 | chr3:60351003-60351460 | GM12878 | blood: | n/a | n/a |
25 | ATF2 | chr3:60351012-60351394 | GM12878 | blood: | n/a | n/a |
26 | ATF2 | chr3:60349588-60349948 | GM12878 | blood: | n/a | n/a |
27 | ATF2 | chr3:60643624-60644120 | GM12878 | blood: | n/a | n/a |
28 | ATF2 | chr3:60175754-60176100 | GM12878 | blood: | n/a | n/a |
29 | ATF2 | chr3:60349558-60349876 | GM12878 | blood: | n/a | n/a |
30 | ATF2 | chr3:60638663-60639024 | GM12878 | blood: | n/a | n/a |
31 | ATF2 | chr3:60643614-60644165 | GM12878 | blood: | n/a | n/a |
32 | ATF3 | chr3:60399893-60400153 | K562 | blood: | n/a | n/a |
33 | ATF3 | chr3:60541358-60541754 | H1-hESC | embryonic stem cell: | n/a | n/a |
34 | BACH1 | chr3:60357076-60357087 | K562 | blood: | n/a | n/a |
35 | BACH1 | chr3:60506210-60506414 | K562 | blood: | n/a | n/a |
36 | BACH1 | chr3:60247867-60247880 | K562 | blood: | n/a | n/a |
37 | BACH1 | chr3:60238886-60239061 | K562 | blood: | n/a | n/a |
38 | BACH1 | chr3:60241691-60241802 | K562 | blood: | n/a | n/a |
39 | BACH1 | chr3:60477738-60477770 | K562 | blood: | n/a | n/a |
40 | BACH1 | chr3:60359786-60359879 | K562 | blood: | n/a | n/a |
41 | BATF | chr3:60490607-60490758 | GM12878 | blood: | n/a | n/a |
42 | BATF | chr3:60211442-60211893 | GM12878 | blood: | n/a | chr3:60211654-60211663 |
43 | BATF | chr3:60178290-60178695 | GM12878 | blood: | n/a | n/a |
44 | BATF | chr3:60178356-60178622 | GM12878 | blood: | n/a | n/a |
45 | BATF | chr3:60351158-60351397 | GM12878 | blood: | n/a | chr3:60351243-60351253 chr3:60351212-60351222 chr3:60351242-60351253 |
46 | BATF | chr3:60349510-60349904 | GM12878 | blood: | n/a | chr3:60349735-60349746 |
47 | BATF | chr3:60125935-60126267 | GM12878 | blood: | n/a | n/a |
48 | BATF | chr3:60538939-60539154 | GM12878 | blood: | n/a | n/a |
49 | BATF | chr3:60211557-60211749 | GM12878 | blood: | n/a | chr3:60211654-60211663 |
50 | BATF | chr3:60643628-60644136 | GM12878 | blood: | n/a | n/a |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr3:60534659-60534709 | MCF10A-Er-Src | breast: | n/a |
2 | chr3:60752789-60752839 | GM06990 | blood: | n/a |
3 | chr3:60388836-60388886 | K562 | blood: | n/a |
4 | chr3:60534659-60534709 | MCF10A-Er-Src | breast: | n/a |
5 | chr3:60752789-60752839 | GM06990 | blood: | n/a |
6 | chr3:60388836-60388886 | K562 | blood: | n/a |
7 | chr3:60288717-60288767 | MCF10A-Er-Src | breast: | n/a |
8 | chr3:60226328-60226378 | Jurkat | blood: | n/a |
9 | chr3:60559834-60559884 | BJ | skin: | n/a |
10 | chr3:60574436-60574486 | AoSMC | blood vessel: | n/a |
11 | chr3:60388836-60388886 | HPAEpiC | pulmonary alveolar: | n/a |
12 | chr3:60541935-60541985 | MCF-7 | breast: | n/a |
13 | chr3:60309590-60309640 | A549 | lung: | n/a |
14 | chr3:60728530-60728580 | NHBE | bronchial: | n/a |
15 | chr3:60420416-60420466 | PFSK-1 | brain: | n/a |
16 | chr3:60656177-60656227 | HNPCEpiC | eye: | n/a |
17 | chr3:60534659-60534709 | HIPEpiC | eye: | n/a |
18 | chr3:60818194-60818244 | NHBE | bronchial: | n/a |
19 | chr3:60541935-60541985 | SK-N-SH_RA | brain: | n/a |
20 | chr3:60818194-60818244 | HCM | heart: | n/a |
21 | chr3:60622526-60622576 | HEK293 | kidney: | embryo |
22 | chr3:60226328-60226378 | IMR90 | lung: | fetal |
23 | chr3:60740074-60740124 | GM19239 | blood: | n/a |
24 | chr3:60728530-60728580 | ProgFib | skin: | n/a |
25 | chr3:60288717-60288767 | NHBE | bronchial: | n/a |
26 | chr3:60309590-60309640 | HCPEpiC | choroid plexus: | n/a |
27 | chr3:60226328-60226378 | MCF-7 | breast: | n/a |
28 | chr3:60617504-60617554 | PrEC | prostate: | n/a |
29 | chr3:60740074-60740124 | IMR90 | lung: | fetal |
30 | chr3:60363505-60363555 | CMK | blood: | n/a |
31 | chr3:60818194-60818244 | NH-A | brain: | n/a |
32 | chr3:60574436-60574486 | NT2-D1 | testis: | n/a |
33 | chr3:60656177-60656227 | HRCEpiC | kidney: | n/a |
34 | chr3:60574436-60574486 | K562 | blood: | n/a |
35 | chr3:60363505-60363555 | GM06990 | blood: | n/a |
36 | chr3:60747416-60747466 | HL-60 | blood: | n/a |
37 | chr3:60747416-60747466 | HRE | kidney: | n/a |
38 | chr3:60656177-60656227 | AG10803 | skin: | n/a |
39 | chr3:60388836-60388886 | SAEC | small airway: | n/a |
40 | chr3:60740074-60740124 | HAEpiC | amniotic membrane: | n/a |
41 | chr3:60574436-60574486 | HRE | kidney: | n/a |
42 | chr3:60574436-60574486 | AG09319 | gingival: | n/a |
43 | chr3:60534659-60534709 | NB4 | blood: | n/a |
44 | chr3:60574436-60574486 | HRPEpiC | eye: | n/a |
45 | chr3:60740074-60740124 | HMEC | breast: | n/a |
46 | chr3:60622526-60622576 | NHBE | bronchial: | n/a |
47 | chr3:60388836-60388886 | HNPCEpiC | eye: | n/a |
48 | chr3:60587837-60587887 | GM19239 | blood: | n/a |
49 | chr3:60587837-60587887 | SK-N-MC | brain: | n/a |
50 | chr3:60288717-60288767 | NB4 | blood: | n/a |
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr3:60314052..60317809-chr3:60320135..60322733,3 | K562 | blood: | |
2 | chr3:60261650..60264808-chr3:60273372..60278082,5 | K562 | blood: | |
3 | chr3:60216976..60218581-chr3:60221614..60223794,2 | K562 | blood: | |
4 | chr3:60335312..60337513-chr3:60384353..60386284,2 | K562 | blood: | |
5 | chr3:60248856..60251161-chr3:60252178..60254260,3 | K562 | blood: | |
6 | chr3:60234763..60239313-chr3:60259101..60264028,5 | K562 | blood: | |
7 | chr3:60788618..60790358-chr3:60795094..60797575,2 | K562 | blood: | |
8 | chr3:60261204..60265514-chr3:60273828..60277768,4 | K562 | blood: | |
9 | chr3:60200174..60203052-chr3:60295659..60297420,2 | K562 | blood: | |
10 | chr3:60233213..60236039-chr3:60237445..60240033,2 | K562 | blood: | |
11 | chr3:60746660..60748176-chr3:60753528..60755409,2 | MCF-7 | breast: | |
12 | chr3:60232635..60234409-chr3:60265559..60267834,2 | K562 | blood: | |
13 | chr3:60509060..60510930-chr3:60511428..60512938,2 | K562 | blood: | |
14 | chr3:60250531..60257484-chr3:60260695..60265801,11 | K562 | blood: | |
15 | chr3:60628440..60630425-chr3:60631451..60633891,2 | K562 | blood: | |
16 | chr3:60475674..60478079-chr3:60479619..60482202,2 | K562 | blood: | |
17 | chr3:60227860..60230033-chr3:60233057..60236236,5 | K562 | blood: | |
18 | chr3:60269337..60271765-chr3:60281168..60285461,3 | K562 | blood: | |
19 | chr3:60605481..60608081-chr3:60751441..60753004,2 | K562 | blood: | |
20 | chr3:60201561..60203293-chr3:60258409..60260445,2 | K562 | blood: | |
21 | chr3:60486499..60489215-chr3:60499142..60502130,2 | K562 | blood: | |
22 | chr3:60468425..60470651-chr3:60470930..60473335,2 | K562 | blood: | |
23 | chr3:60251900..60257769-chr3:60262692..60266340,5 | K562 | blood: | |
24 | chr3:60233213..60236039-chr3:60237445..60240033,2 | K562 | blood: | |
25 | chr3:60418409..60420748-chr3:60421749..60423425,2 | MCF-7 | breast: | |
26 | chr3:60284006..60286419-chr3:60293595..60296204,2 | K562 | blood: | |
27 | chr3:60320744..60322657-chr3:60325498..60327603,2 | K562 | blood: | |
28 | chr3:60260853..60263177-chr3:60264748..60269648,5 | K562 | blood: | |
29 | chr3:60329453..60332321-chr3:60334364..60336807,3 | K562 | blood: | |
30 | chr3:60302553..60304671-chr3:60309983..60311740,2 | K562 | blood: | |
31 | chr3:60766983..60769190-chr3:60776208..60778636,2 | K562 | blood: | |
32 | chr3:60263321..60265309-chr3:60503721..60505576,2 | K562 | blood: | |
33 | chr3:60483853..60486464-chr3:60489187..60492049,2 | K562 | blood: | |
34 | chr3:60265834..60270132-chr3:60272142..60277781,4 | K562 | blood: | |
35 | chr3:60628440..60630425-chr3:60631451..60633891,2 | K562 | blood: | |
36 | chr3:60467604..60470651-chr3:60470930..60473335,3 | K562 | blood: | |
37 | chr3:60271832..60274094-chr3:60278099..60280290,3 | K562 | blood: | |
38 | chr3:60282564..60285388-chr3:60286384..60290912,4 | K562 | blood: | |
39 | chr3:60264136..60267761-chr3:60268146..60273300,4 | K562 | blood: | |
40 | chr3:60404994..60406496-chr3:60413046..60414548,2 | K562 | blood: | |
41 | chr3:60259045..60261438-chr3:60261640..60264472,4 | K562 | blood: | |
42 | chr3:60269337..60271765-chr3:60281168..60285461,3 | K562 | blood: | |
43 | chr3:60183906..60185619-chr3:60186648..60189161,2 | K562 | blood: | |
44 | chr3:60766983..60769190-chr3:60776208..60778636,2 | K562 | blood: | |
45 | chr3:60244130..60245681-chr3:60258765..60261150,2 | K562 | blood: | |
46 | chr3:60248856..60251063-chr3:60252178..60253698,2 | K562 | blood: | |
47 | chr3:60187999..60188742-chr3:60417102..60417817,2 | MCF-7 | breast: | |
48 | chr3:60101310..60104205-chr3:60104357..60107292,2 | K562 | blood: | |
49 | chr1:173793901..173794609-chr3:60743818..60744771,2 | MCF-7 | breast: | |
50 | chr3:60244807..60248517-chr3:60249578..60252504,4 | K562 | blood: |
(count:4 , 50 per page) page:
1
No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-FEZF2-9 | chr3:60521543-60522712 | NONHSAT090160 |
2 | lnc-FEZF2-8 | chr3:60717877-60718369 | NONHSAT090162 |
3 | lnc-PTPRG-5 | chr3:60602555-60603812 | NONHSAT090161 |
4 | lnc-FEZF2-9 | chr3:60807613-60807705 | NONHSAT090160 |
No data |
No data |
Variant related genes | Relation type |
---|---|
FHIT | TF binding region |
ENSG00000240097 | TF binding region |
ENSG00000244183 | TF binding region |
ENSG00000225673 | TF binding region |
ENSG00000232407 | TF binding region |
FHIT | CpG island |
ENSG00000240097 | CpG island |
ENSG00000244183 | CpG island |
ENSG00000225673 | CpG island |
ENSG00000232407 | CpG island |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs368662819 | chr3:60088360-60088361 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
2 | rs535738200 | chr3:60088407-60088408 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
3 | rs141347406 | chr3:60088435-60088436 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
4 | rs969562 | chr3:60088482-60088483 | Weak transcription Enhancers | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | mRNA abundance |
5 | rs531055776 | chr3:60088529-60088530 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
6 | rs542802917 | chr3:60088534-60088535 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
7 | rs376523366 | chr3:60088571-60088572 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
8 | rs561662719 | chr3:60088578-60088579 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
9 | rs370091522 | chr3:60088583-60088584 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
10 | rs528959059 | chr3:60088625-60088626 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
11 | rs547145774 | chr3:60088631-60088632 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
12 | rs565683050 | chr3:60088663-60088664 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
13 | rs554102844 | chr3:60088670-60088671 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
14 | rs115833133 | chr3:60088681-60088682 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
15 | rs143310072 | chr3:60088700-60088701 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
16 | rs11926900 | chr3:60088713-60088714 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
17 | rs569958362 | chr3:60088725-60088726 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
18 | rs377399211 | chr3:60088732-60088733 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
19 | rs555581496 | chr3:60088751-60088752 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
20 | rs567321515 | chr3:60088752-60088753 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
21 | rs535135204 | chr3:60088774-60088775 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
22 | rs553152317 | chr3:60088800-60088801 | Enhancers Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
23 | rs577972343 | chr3:60088803-60088804 | Enhancers Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
24 | rs77217412 | chr3:60088812-60088813 | Enhancers Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
25 | rs560795828 | chr3:60088828-60088829 | Enhancers Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
26 | rs572372651 | chr3:60088847-60088848 | Enhancers Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
27 | rs371234689 | chr3:60088860-60088861 | Enhancers Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
28 | rs370356544 | chr3:60088863-60088864 | Enhancers Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
29 | rs557271069 | chr3:60088875-60088876 | Enhancers Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
30 | rs575514867 | chr3:60088877-60088878 | Enhancers Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
31 | rs182012281 | chr3:60088884-60088885 | Enhancers Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
32 | rs561551089 | chr3:60088917-60088918 | Enhancers Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
33 | rs377496479 | chr3:60088923-60088924 | Enhancers Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
34 | rs151277222 | chr3:60088930-60088931 | Enhancers Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
35 | rs111570393 | chr3:60088940-60088941 | Enhancers Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
36 | rs559183580 | chr3:60088965-60088966 | Enhancers Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
37 | rs186233452 | chr3:60088969-60088970 | Enhancers Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
38 | rs140475339 | chr3:60089022-60089023 | Enhancers Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
39 | rs563604035 | chr3:60089067-60089068 | Enhancers Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
40 | rs190507815 | chr3:60089096-60089097 | Enhancers Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
41 | rs548973733 | chr3:60089134-60089135 | Enhancers Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
42 | rs567464235 | chr3:60089135-60089136 | Enhancers Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
43 | rs534471721 | chr3:60089143-60089144 | Enhancers Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
44 | rs558321444 | chr3:60089175-60089176 | Enhancers Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
45 | rs116813761 | chr3:60089184-60089185 | Enhancers Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
46 | rs571397895 | chr3:60089191-60089192 | Enhancers Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
47 | rs538680367 | chr3:60089235-60089236 | Enhancers Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
48 | rs556913415 | chr3:60089239-60089240 | Enhancers Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
49 | rs575205049 | chr3:60089262-60089263 | Enhancers Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
50 | rs9871368 | chr3:60089286-60089287 | Enhancers Weak transcription | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | mRNA abundance |
Disease | PMID | Source |
---|---|---|
Melanoma | 18172304 | CNVD |
Cervical cancer | 21062161 | CNVD |
Hirschsprung''s Disease | 21712996 | CNVD |
Acute myeloid leukemia | 20729466 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
head and neck squamous cell carcinoma | 17671120 | CNVD |
Insulin resistance | 16721378 | CNVD |
Neuroblastoma | 18664255 | CNVD |
Monoclonal gammopathy of undetermined significance | 17077331 | CNVD |
Multiple myeloma | 17077331 | CNVD |
Oral squamous cell carcinoma | 17134496 | CNVD |
Ewing''s sarcoma | 21437220 | CNVD |
Neuroblastoma | 21484798 | CNVD |
Non-small cell lung cancer | 21044232 | CNVD |
Non-syndromic sensorineural hearing loss | 18471307 | CNVD |
Oral cancer | 19627613 | CNVD |
Renal cell carcinoma | 19461508 | CNVD |
Epithelial cancer | 22065749 | CNVD |
Acute lymphoblastic leukemia | 21390130 | CNVD |
Acute myeloid leukemia | 16864856 | CNVD |
Liposarcoma | 21253554 | CNVD |
Basal cell lymphoma | 21115979 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Pancreatic endocrine tumor | 20981439 | CNVD |
Astrocytoma | 17387387 | CNVD |
Breast cancer | 21264507 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Glioblastoma multiforme | 17387387 | CNVD |
Oral cancer | 21386901 | CNVD |
Cutaneous squamous cell carcinomas | 19131950 | CNVD |
Medulloblastoma | 21979893 | CNVD |
Basal cell lymphoma | 17053054 | CNVD |
Esophageal cancer | 21851588 | CNVD |
Uveal melanoma | 21693616 | CNVD |
Retinoblastoma | 21504564 | CNVD |
T-cell prolymphocytic leukemia | 17713554 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Renal cell carcinoma | 21668985 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
Thoracic aortic aneurysm | 21092924 | CNVD |
Lung cancer | 18438408 | CNVD |
Intellectual disability | 22102821 | CNVD |
Breast cancer | 17603634 | CNVD |
Esophageal cancer | 20955586 | CNVD |
Breast cancer | 17133270 | CNVD |
Uveal melanoma | 20484589 | CNVD |
Autism | 22495311 | CNVD |
Acute myeloid leukemia | 21251322 | CNVD |
Hepatocellular carcinoma | 16750200 | CNVD |
Cancer | 21183584 | CNVD |
Acute lymphoblastic leukemia | 20067559 | CNVD |
Bipolar disorder | 20877625 | CNVD |
Bipolar disorder | 21956041 | CNVD |
Bipolar disorder | 22241247 | CNVD |
Biliary cancer | 18923514 | CNVD |
Malignant mesothelioma | 18160781 | CNVD |
Pleural malignant mesothelioma | 18160781 | CNVD |
Breast cancer | 21785460 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Squamous cell cancer | 20885788 | CNVD |
Breast cancer | 16608533 | CNVD |
Prostate cancer | 21965145 | CNVD |
Cancer | 21129771 | CNVD |
Congenital diaphragmatic hernia | 21085971 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Prostate cancer | 18632612 | CNVD |
Breast cancer | 19490591 | CNVD |
Autism | 18414403 | CNVD |
Myeloproliferative neoplasm | 20015882 | CNVD |
Non-small cell lung cancer | 20864512 | CNVD |
Metastatic melanoma | 17975146 | CNVD |
Cancer | 18162546 | CNVD |
Acute lymphoblastic leukemia | 18458336 | CNVD |
Breast cancer | 21509527 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Barrett''s adenocarcinoma | 18663352 | CNVD |
Myxofibrosarcoma | 16751306 | CNVD |
Non-small cell lung cancer | 21829676 | CNVD |
Urothelial cell carcinoma | 18451213 | CNVD |
Esophageal squamous carcinoma | 17470683 | CNVD |
Colorectal cancer | 16272173 | CNVD |
Mental retardation | 17847001 | CNVD |
Neuroticism | 17667963 | CNVD |
Squamous cell cancer | 19047905 | CNVD |
Esophageal squamous carcinoma | 18405350 | CNVD |
Cancer | 20164920 | CNVD |
Schizophrenia | 23813976 | CNVD |
Autism | 22102821 | CNVD |
Prostate cancer | 19363497 | CNVD |
Malaria | 21533027 | CNVD |
Pancreatic cancer | 17952125 | CNVD |
Breast cancer | 22522925 | CNVD |
Colorectal cancer | 21518781 | CNVD |
Esophageal cancer | 21518781 | CNVD |
Acute lymphoblastic leukemia | 21248843 | CNVD |
Glioblastoma multiforme | 21569311 | CNVD |
Acute lymphoblastic leukemia | 19100363 | CNVD |
Cancer | 20164919 | CNVD |
Schizophrenia | 20967226 | CNVD |
Glioma | 20126413 | CNVD |
Burkitt''s lymphoma | 20823134 | CNVD |
Burkitt''s lymphoma | 19759907 | CNVD |
Gastric cancer | 22315472 | CNVD |
Ependymoma | 20639864 | CNVD |
Non-syndromic sensorineural hearing loss | 21293372 | CNVD |
Non-syndromic sensorineural hearing loss | 17122850 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr3:60081400-60089600 | Weak transcription | Stomach Mucosa | stomach |
2 | chr3:60082400-60088800 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
3 | chr3:60086200-60089600 | Enhancers | Sigmoid Colon | Sigmoid Colon |
4 | chr3:60086200-60091000 | Enhancers | Fetal Intestine Large | intestine |
5 | chr3:60086200-60091600 | Enhancers | Fetal Intestine Small | intestine |
6 | chr3:60087000-60090200 | Enhancers | Fetal Heart | heart |
7 | chr3:60087800-60089000 | Weak transcription | Fetal Lung | lung |
8 | chr3:60088000-60088800 | Weak transcription | Duodenum Mucosa | Duodenum |
9 | chr3:60088800-60089000 | Enhancers | Duodenum Mucosa | Duodenum |
10 | chr3:60088800-60089600 | Enhancers | Fetal Thymus | thymus |
11 | chr3:60088800-60090800 | Enhancers | Primary T helper naive cells fromperipheralblood | blood |
12 | chr3:60088800-60091200 | Enhancers | Dnd41 | blood |
13 | chr3:60088800-60091400 | Enhancers | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
14 | chr3:60089000-60089800 | Enhancers | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
15 | chr3:60089000-60089800 | Enhancers | Primary hematopoietic stem cells | blood |
16 | chr3:60089000-60090000 | Enhancers | Fetal Lung | lung |
17 | chr3:60089200-60089400 | Enhancers | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
18 | chr3:60089400-60090400 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
19 | chr3:60089400-60091000 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
20 | chr3:60089600-60089800 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
21 | chr3:60089600-60090400 | Weak transcription | Fetal Thymus | thymus |
22 | chr3:60089600-60090800 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
23 | chr3:60089600-60091200 | Enhancers | Primary T cells from cord blood | blood |
24 | chr3:60089600-60091800 | Enhancers | Primary T helper cells PMA-I stimulated | -- |
25 | chr3:60089600-60092000 | Enhancers | Primary T helper cells fromperipheralblood | blood |
26 | chr3:60089800-60090200 | Weak transcription | Primary hematopoietic stem cells | blood |
27 | chr3:60089800-60090600 | Enhancers | Primary T helper memory cells from peripheral blood 1 | blood |
28 | chr3:60089800-60091400 | Enhancers | H9 Derived Neuron Cultured Cells | ES cell derived |
29 | chr3:60089800-60091400 | Enhancers | Cortex derived primary cultured neurospheres | brain |
30 | chr3:60089800-60091400 | Enhancers | Ganglion Eminence derived primary cultured neurospheres | brain |
31 | chr3:60090000-60091200 | Enhancers | Primary T helper naive cells from peripheral blood | blood |
32 | chr3:60090000-60091400 | Enhancers | Primary T helper memory cells from peripheral blood 2 | blood |
33 | chr3:60090200-60090800 | Enhancers | Primary hematopoietic stem cells | blood |
34 | chr3:60090400-60090600 | Enhancers | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
35 | chr3:60090400-60090600 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
36 | chr3:60090400-60090800 | Enhancers | HUES64 Cell Line | embryonic stem cell |
37 | chr3:60090400-60091000 | Enhancers | Brain Inferior Temporal Lobe | brain |
38 | chr3:60090400-60091000 | Enhancers | Fetal Thymus | thymus |
39 | chr3:60090400-60091200 | Enhancers | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
40 | chr3:60090400-60091200 | Enhancers | Primary T regulatory cells fromperipheralblood | blood |
41 | chr3:60090600-60091200 | Enhancers | Brain Substantia Nigra | brain |
42 | chr3:60090800-60091000 | Flanking Active TSS | Primary T helper naive cells fromperipheralblood | blood |
43 | chr3:60090800-60091000 | Enhancers | Sigmoid Colon | Sigmoid Colon |
44 | chr3:60090800-60091200 | Enhancers | Brain Cingulate Gyrus | brain |
45 | chr3:60090800-60091200 | Enhancers | Brain Hippocampus Middle | brain |
46 | chr3:60090800-60091400 | Enhancers | Brain Angular Gyrus | brain |
47 | chr3:60091000-60091400 | Enhancers | Primary T helper naive cells fromperipheralblood | blood |
48 | chr3:60091000-60091800 | Weak transcription | Fetal Intestine Large | intestine |
49 | chr3:60091200-60091600 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
50 | chr3:60091200-60095400 | Weak transcription | Primary T cells from cord blood | blood |