Variant report

Variant	nsv530742
Chromosome Location	chr13:96917313-97627023
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:2342)
CpG islands
(count:1038)
Chromatin interactive
region (count:79)
LncRNA
region (count:13)
Mature miRNA
region (count: 1)
miRNA target
sites (count:0)

(count:2342 , 50 per page) page: 1 2 3 4 5 6 7 ... 47

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr13:97577756-97578606	HepG2	liver:	n/a	n/a
2	ARID3A	chr13:97234582-97234671	K562	blood:	n/a	n/a
3	ARID3A	chr13:97610608-97610831	HepG2	liver:	n/a	n/a
4	ARID3A	chr13:97500708-97500826	HepG2	liver:	n/a	n/a
5	ATF1	chr13:97069847-97069922	K562	blood:	n/a	n/a
6	ATF2	chr13:97302681-97303093	GM12878	blood:	n/a	n/a
7	ATF2	chr13:97469139-97469525	H1-hESC	embryonic stem cell:	n/a	n/a
8	BACH1	chr13:97362178-97363020	H1-hESC	embryonic stem cell:	n/a	n/a
9	BACH1	chr13:97469278-97469592	H1-hESC	embryonic stem cell:	n/a	n/a
10	BACH1	chr13:97128010-97128209	H1-hESC	embryonic stem cell:	n/a	chr13:97128034-97128048
11	BACH1	chr13:97338702-97338804	H1-hESC	embryonic stem cell:	n/a	n/a
12	BACH1	chr13:97339077-97339110	H1-hESC	embryonic stem cell:	n/a	n/a
13	BATF	chr13:97302617-97303035	GM12878	blood:	n/a	n/a
14	BATF	chr13:97153304-97153567	GM12878	blood:	n/a	n/a
15	BATF	chr13:97061873-97062103	GM12878	blood:	n/a	n/a
16	BATF	chr13:97153302-97153519	GM12878	blood:	n/a	n/a
17	BATF	chr13:97302664-97302993	GM12878	blood:	n/a	n/a
18	BATF	chr13:97184568-97184814	GM12878	blood:	n/a	n/a
19	BHLHE40	chr13:97578224-97578831	HepG2	liver:	n/a	chr13:97578692-97578701
20	BHLHE40	chr13:97153318-97153519	GM12878	blood:	n/a	n/a
21	BHLHE40	chr13:97619883-97619912	K562	blood:	n/a	n/a
22	BHLHE40	chr13:97551252-97551485	HepG2	liver:	n/a	n/a
23	BRCA1	chr13:97610623-97610832	H1-hESC	embryonic stem cell:	n/a	n/a
24	BRCA1	chr13:97533456-97533550	GM12878	blood:	n/a	n/a
25	BRCA1	chr13:97209846-97209922	HepG2	liver:	n/a	n/a
26	BRCA1	chr13:97131098-97131110	H1-hESC	embryonic stem cell:	n/a	n/a
27	BRCA1	chr13:96942285-96942294	H1-hESC	embryonic stem cell:	n/a	n/a
28	BRCA1	chr13:96961633-96961819	H1-hESC	embryonic stem cell:	n/a	n/a
29	CBX3	chr13:97475149-97475469	HCT-116	colon:	n/a	n/a
30	CEBPB	chr13:97626249-97626431	IMR90	lung:	n/a	chr13:97626310-97626321
31	CEBPB	chr13:97152045-97152255	Hela-S3	cervix:	n/a	chr13:97152063-97152074
32	CEBPB	chr13:97299000-97299021	HepG2	liver:	n/a	chr13:97299009-97299020
33	CEBPB	chr13:97450646-97450922	HepG2	liver:	n/a	chr13:97450791-97450802
34	CEBPB	chr13:97136430-97136616	HepG2	liver:	n/a	chr13:97136479-97136490
35	CEBPB	chr13:97287311-97287315	H1-hESC	embryonic stem cell:	n/a	n/a
36	CEBPB	chr13:97504167-97504501	HepG2	liver:	n/a	chr13:97504344-97504355
37	CEBPB	chr13:97468523-97468817	HepG2	liver:	n/a	chr13:97468680-97468691
38	CEBPB	chr13:97577860-97578588	MCF-7	breast:	n/a	chr13:97578094-97578107
39	CEBPB	chr13:97621145-97621222	K562	blood:	n/a	chr13:97621200-97621211
40	CEBPB	chr13:97481314-97481417	H1-hESC	embryonic stem cell:	n/a	chr13:97481350-97481361 chr13:97481348-97481359 chr13:97481348-97481361 chr13:97481348-97481361
41	CEBPB	chr13:97050204-97050372	K562	blood:	n/a	n/a
42	CEBPB	chr13:97390812-97391051	A549	lung:	n/a	n/a
43	CEBPB	chr13:97225084-97225229	HepG2	liver:	n/a	n/a
44	CEBPB	chr13:96977926-96978221	IMR90	lung:	n/a	chr13:96978062-96978075 chr13:96978063-96978074
45	CEBPB	chr13:97335028-97335119	H1-hESC	embryonic stem cell:	n/a	n/a
46	CEBPB	chr13:97626275-97626351	HepG2	liver:	n/a	chr13:97626310-97626321
47	CEBPB	chr13:97303571-97303757	HepG2	liver:	n/a	chr13:97303648-97303659
48	CEBPB	chr13:97621057-97621374	HepG2	liver:	n/a	chr13:97621200-97621211
49	CEBPB	chr13:97577898-97578492	MCF-7	breast:	n/a	chr13:97578094-97578107
50	CEBPB	chr13:97424031-97424340	HepG2	liver:	n/a	chr13:97424164-97424175

(count:1038 , 50 per page) page: 1 2 3 4 5 6 7 ... 21

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr13:97422029-97422079	MCF-7	breast:	n/a
2	chr13:97422029-97422079	MCF-7	breast:	n/a
3	chr13:96984206-96984256	SAEC	small airway:	n/a
4	chr13:97600124-97600174	NT2-D1	testis:	n/a
5	chr13:97422029-97422079	BE2_C	brain:	n/a
6	chr13:96984133-96984183	GM06990	blood:	n/a
7	chr13:97599787-97599837	SK-N-MC	brain:	n/a
8	chr13:96949801-96949851	SAEC	small airway:	n/a
9	chr13:97600043-97600093	HRCEpiC	kidney:	n/a
10	chr13:97065757-97065807	A549	lung:	n/a
11	chr13:97153748-97153798	RPTEC	kidney:	n/a
12	chr13:97600191-97600241	K562	blood:	n/a
13	chr13:97488358-97488408	GM06990	blood:	n/a
14	chr13:96984206-96984256	AG10803	skin:	n/a
15	chr13:97488358-97488408	SK-N-SH	brain:	n/a
16	chr13:97600168-97600218	HRCEpiC	kidney:	n/a
17	chr13:97600043-97600093	HAEpiC	amniotic membrane:	n/a
18	chr13:97126731-97126781	Hela-S3	cervix:	n/a
19	chr13:97126731-97126781	HEEpiC	esophagus:	n/a
20	chr13:97422029-97422079	HepG2	liver:	n/a
21	chr13:96984133-96984183	CMK	blood:	n/a
22	chr13:97488358-97488408	HPAEpiC	pulmonary alveolar:	n/a
23	chr13:97599820-97599870	U87	brain:	n/a
24	chr13:97153748-97153798	HMEC	breast:	n/a
25	chr13:97065757-97065807	Hepatocyte	liver:	n/a
26	chr13:96984206-96984256	A549	lung:	n/a
27	chr13:97422029-97422079	SK-N-SH	brain:	n/a
28	chr13:97107445-97107495	K562	blood:	n/a
29	chr13:97600186-97600236	Jurkat	blood:	n/a
30	chr13:97599820-97599870	SK-N-MC	brain:	n/a
31	chr13:97107445-97107495	HIPEpiC	eye:	n/a
32	chr13:97600186-97600236	HepG2	liver:	n/a
33	chr13:97600043-97600093	GM12878	blood:	n/a
34	chr13:96984133-96984183	AG04450	lung:	fetal
35	chr13:97600186-97600236	NHDF-neo	bronchial:	n/a
36	chr13:97153748-97153798	BE2_C	brain:	n/a
37	chr13:97600124-97600174	SKMC	muscle:	n/a
38	chr13:97600191-97600241	HEEpiC	esophagus:	n/a
39	chr13:97126731-97126781	HAEpiC	amniotic membrane:	n/a
40	chr13:97600191-97600241	AG04450	lung:	fetal
41	chr13:97600186-97600236	PrEC	prostate:	n/a
42	chr13:97469575-97469625	H1-hESC	embryonic stem cell:	embryo
43	chr13:97600186-97600236	ovcar-3	ovarian:	n/a
44	chr13:97599820-97599870	HCT-116	colon:	n/a
45	chr13:96949801-96949851	HCF	heart:	n/a
46	chr13:97153748-97153798	HIPEpiC	eye:	n/a
47	chr13:96949801-96949851	SK-N-MC	brain:	n/a
48	chr13:97600191-97600241	NT2-D1	testis:	n/a
49	chr13:97153748-97153798	MCF10A-Er-Src	breast:	n/a
50	chr13:97107445-97107495	NH-A	brain:	n/a

(count:79 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr1:50095964..50096471-chr13:97582450..97583212,2	MCF-7	breast:
2	chr13:97241737..97243330-chr13:97271160..97273681,2	MCF-7	breast:
3	chr13:97320338..97323043-chr13:97323950..97326870,2	K562	blood:
4	chr13:97302477..97304696-chr13:97307332..97309861,2	MCF-7	breast:
5	chr13:97123948..97125852-chr13:97129896..97131619,2	K562	blood:
6	chr13:97047617..97050128-chr13:97056674..97059617,2	K562	blood:
7	chr13:97474828..97475837-chr13:97610526..97611319,3	MCF-7	breast:
8	chr13:97447186..97448868-chr13:97448992..97450906,3	K562	blood:
9	chr13:97591753..97593843-chr13:97596968..97599898,3	MCF-7	breast:
10	chr13:96951281..96952208-chr13:97448274..97448845,2	MCF-7	breast:
11	chr13:96865363..96867904-chr13:97451700..97453220,2	MCF-7	breast:
12	chr13:97378483..97379144-chr4:131166728..131167230,2	MCF-7	breast:
13	chr13:97320338..97323043-chr13:97323950..97326870,2	K562	blood:
14	chr13:97045257..97047343-chr13:97050874..97053623,2	MCF-7	breast:
15	chr13:97591753..97593843-chr13:97596968..97599898,3	MCF-7	breast:
16	chr13:97373818..97375805-chr13:97377512..97381294,3	K562	blood:
17	chr13:97371483..97372352-chr3:76430236..76431112,2	MCF-7	breast:
18	chr13:97503159..97505029-chr13:97506327..97508574,2	K562	blood:
19	chr13:97265116..97268425-chr13:97269725..97272716,3	K562	blood:
20	chr13:97612089..97614606-chr13:97618416..97620262,2	K562	blood:
21	chr13:97475217..97475841-chr13:97610403..97611112,2	MCF-7	breast:
22	chr13:97150259..97153204-chr13:97154134..97156231,2	K562	blood:
23	chr13:97171093..97173298-chr13:97369679..97371227,2	MCF-7	breast:
24	chr13:97474950..97475596-chr13:97615671..97616481,3	MCF-7	breast:
25	chr13:97150259..97153204-chr13:97154134..97156231,2	K562	blood:
26	chr13:97265116..97268425-chr13:97269725..97272716,3	K562	blood:
27	chr13:97469481..97470002-chr13:97680693..97681261,2	MCF-7	breast:
28	chr13:97550582..97553247-chr13:97555120..97556675,2	K562	blood:
29	chr13:97047617..97050128-chr13:97056674..97059617,2	K562	blood:
30	chr13:97390398..97393074-chr13:97394805..97397373,2	MCF-7	breast:
31	chr13:97447186..97448868-chr13:97448992..97450906,3	K562	blood:
32	chr13:96946178..96948064-chr13:96950276..96952772,2	K562	blood:
33	chr13:97503159..97505029-chr13:97506327..97508574,2	K562	blood:
34	chr13:97123948..97125852-chr13:97129896..97131619,2	K562	blood:
35	chr13:97352840..97354998-chr13:97355224..97357539,2	MCF-7	breast:
36	chr13:97045257..97047343-chr13:97050874..97053623,2	MCF-7	breast:
37	chr13:97444708..97447037-chr13:97450203..97451732,2	MCF-7	breast:
38	chr13:97127272..97129084-chr13:97157433..97159683,2	MCF-7	breast:
39	chr13:96933248..96934803-chr13:96938522..96940997,2	MCF-7	breast:
40	chr13:97169094..97173338-chr13:97202267..97205317,4	MCF-7	breast:
41	chr13:96705085..96707362-chr13:97040004..97041510,2	MCF-7	breast:
42	chr13:97446851..97449355-chr13:97453910..97456534,2	K562	blood:
43	chr13:97474587..97475744-chr13:97680692..97681384,3	MCF-7	breast:
44	chr13:96672084..96672616-chr13:97469396..97470262,2	MCF-7	breast:
45	chr13:97581100..97583674-chr13:97584448..97586028,2	K562	blood:
46	chr13:97302477..97304696-chr13:97307332..97309861,2	MCF-7	breast:
47	chr13:97169094..97173338-chr13:97202267..97205317,4	MCF-7	breast:
48	chr13:97475217..97475841-chr13:97610403..97611112,2	MCF-7	breast:
49	chr13:97447092..97449818-chr13:97451064..97453689,2	K562	blood:
50	chr13:97130348..97132078-chr13:97148789..97150424,2	MCF-7	breast:

(count:13 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-UGGT2-4	chr13:97125266-97125784	NONHSAT034785
2	lnc-DNAJC3-4	chr13:96989764-96989936	l_903_chr13:96989763-96999042_testes
3	lnc-DNAJC3-4	chr13:96998816-96999042	l_903_chr13:96989763-96999042_testes
4	lnc-OXGR1-1	chr13:97608116-97608217	NONHSAT034788
5	lnc-OXGR1-1	chr13:97608116-97608217	ENSG00000243300.2
6	lnc-UGGT2-4	chr13:97128046-97128218	NONHSAT034785
7	lnc-OXGR1-3	chr13:97601503-97601787	NONHSAT034815
8	lnc-DNAJC3-4	chr13:96991437-96991547	l_903_chr13:96989763-96999042_testes
9	lnc-OXGR1-1	chr13:97593683-97594053	ENSG00000243300.2
10	lnc-OXGR1-1	chr13:97593535-97594053	ENSG00000243300.1
11	lnc-OXGR1-1	chr13:97593535-97594053	NONHSAT034788
12	lnc-OXGR1-1	chr13:97600248-97600517	ENSG00000243300.1
13	lnc-MBNL2-4	chr13:97225913-97226753	NONHSAT034786

miRNA name	Chromosome Location	mirBase accession
hsa-miR-4501	chr13:97079483-97079503	MIMAT0019037

No data

Variant related genes	Relation type
ENSG00000272329	TF binding region
RN7SKP7	TF binding region
HSP90AB6P	TF binding region
LINC00359	TF binding region
ENSG00000252154	TF binding region
AMMECR1LP1	TF binding region
TULP3P1	TF binding region
ENSG00000272329	CpG island
RN7SKP7	CpG island
HSP90AB6P	CpG island
LINC00359	CpG island
ENSG00000252154	CpG island
AMMECR1LP1	CpG island
TULP3P1	CpG island
ENSG00000102595	chromatin interactions
FSTL1	miRNA target sites
ZNF280C	miRNA target sites

Extended variants
information (count: 16251 )
Associated
traits (count: 102 )

Variant overlapped rSNPs/rCNVs (count:16251 , 50 per page) page: 1 2 3 4 5 6 7 ... 326

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs545407285	chr13:96917320-96917321	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs565188508	chr13:96917436-96917437	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs111305152	chr13:96917438-96917439	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs190638967	chr13:96917451-96917452	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs575703531	chr13:96917456-96917457	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs544422881	chr13:96917470-96917471	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs560748314	chr13:96917544-96917545	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs529870454	chr13:96917571-96917572	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs540099452	chr13:96917577-96917578	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs138156800	chr13:96917580-96917581	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs11618712	chr13:96917581-96917582	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs560035885	chr13:96917584-96917585	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs531963683	chr13:96917602-96917603	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs552158085	chr13:96917632-96917633	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs181449218	chr13:96917673-96917674	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs370763083	chr13:96917686-96917687	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs531431624	chr13:96917702-96917703	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs557567097	chr13:96917715-96917716	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs138677580	chr13:96917723-96917724	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs143340028	chr13:96917737-96917738	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs369289357	chr13:96917792-96917793	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs553674841	chr13:96917831-96917832	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs542945157	chr13:96917837-96917838	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs11616565	chr13:96917930-96917931	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
25	rs538617305	chr13:96917955-96917956	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs185937969	chr13:96917989-96917990	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs190640640	chr13:96918143-96918144	Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs567948652	chr13:96918199-96918200	Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs544280899	chr13:96918273-96918274	Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs554656191	chr13:96918289-96918290	Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs573110425	chr13:96918313-96918314	Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs9300340	chr13:96918369-96918370	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
33	rs200694585	chr13:96918402-96918403	Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs1927797	chr13:96918410-96918411	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
35	rs565001911	chr13:96918473-96918474	Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs530895250	chr13:96918487-96918488	Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs559973966	chr13:96918503-96918504	Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs532425793	chr13:96918510-96918511	Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs138500412	chr13:96918591-96918592	Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs539244624	chr13:96918653-96918654	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs562482958	chr13:96918698-96918699	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs531242594	chr13:96918725-96918726	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs548274096	chr13:96918765-96918766	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs1927796	chr13:96918833-96918834	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
45	rs115592483	chr13:96918876-96918877	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs547226278	chr13:96918894-96918895	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs2104657	chr13:96918935-96918936	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
48	rs543797239	chr13:96918967-96918968	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs76644756	chr13:96919036-96919037	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs182461291	chr13:96919042-96919043	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:102)

Disease	PMID	Source
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	21080181	CNVD
HIV/AIDS	22032296	CNVD
Prostate cancer	16705090	CNVD
High-proliferative meningiomas	17937814	CNVD
Cancer	20164919	CNVD
Autism	22495311	CNVD
Chordoma	21602918	CNVD
Bladder cancer	21949216	CNVD
Acute myeloid leukemia	16864856	CNVD
Burkitt''s lymphoma	18698080	CNVD
Cancer	21637783	CNVD
Medulloblastoma	21979893	CNVD
Chronic lymphocytic leukemia	21518781	CNVD
colon cancer	17210682	CNVD
Endometrial cancer	22040021	CNVD
Colorectal cancer	20709793	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Ovarian cancer	20844748	CNVD
Colorectal cancer	19359472	CNVD
Intracranial aneurysm	19064780	CNVD
Breast cancer	19287154	CNVD
Acute myeloid leukemia	18379011	CNVD
Human rectal carcinomas	16397240	CNVD
Olfactory neuroblastoma	18408657	CNVD
Multiple myeloma	17077331	CNVD
Ependymoma	16718352	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Colorectal cancer	16272173	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Breast cancer	16608533	CNVD
Neuroblastoma	18923191	CNVD
Ovarian cancer	22174824	CNVD
Myoepithelioma	18604193	CNVD
Breast cancer	17133270	CNVD
Prostate cancer	18632612	CNVD
Melanoma	18172304	CNVD
Prostate cancer	16573809	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Basal cell lymphoma	17053054	CNVD
Metanephric adenoma	20802469	CNVD
Gastric cancer	17908304	CNVD
Splenic marginal zone lymphoma	18492102	CNVD
Liposarcoma	21253554	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Acute myeloid leukemia	20729466	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Non-syndromic sensorineural hearing loss	20606397	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Esophageal cancer	21851588	CNVD
Omodysplasia	19481194	CNVD
Breast cancer	22032731	CNVD
Rhabdomyosarcoma	17210683	CNVD
Wilms tumour	21544195	CNVD
Developmental delay	21147756	CNVD
Myelofibrosis	22110671	CNVD
Hirschsprung''s Disease	21712996	CNVD
Cancer	21183584	CNVD
Breast cancer	17603634	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Thyroid cancer	19087340	CNVD
abortions and stillbirths	19751515	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Acute myeloid leukemia	21251322	CNVD
Acute myeloid leukemia	19651601	CNVD
Congenital anomalies of the kidney and urinary tract	20467480	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Burkitt''s lymphoma	20823134	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Basal cell lymphoma	21115979	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Breast cancer	21785460	CNVD
prenatal diagnosis	22389664	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Schizophrenia	23813976	CNVD
Bladder cancer	21909424	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Non-small cell lung cancer	16651412	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Colorectal cancer	21645411	CNVD

Chromatin state (count:1147 , 50 per page) page: 1 2 3 4 5 6 7 ... 23

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:96907400-96918000	Weak transcription	Pancreatic Islets	Pancreatic Islet
2	chr13:96918000-96918600	Enhancers	Pancreatic Islets	Pancreatic Islet
3	chr13:96918600-96922200	Weak transcription	Pancreatic Islets	Pancreatic Islet
4	chr13:96921800-96925200	Enhancers	Fetal Intestine Large	intestine
5	chr13:96922200-96922600	Enhancers	Pancreas	Pancrea
6	chr13:96922200-96922800	Enhancers	Pancreatic Islets	Pancreatic Islet
7	chr13:96922200-96924800	Enhancers	Fetal Intestine Small	intestine
8	chr13:96922600-96926600	Weak transcription	Pancreas	Pancrea
9	chr13:96922800-96923200	Weak transcription	Pancreatic Islets	Pancreatic Islet
10	chr13:96922800-96924000	Enhancers	iPS-20b Cell Line	embryonic stem cell
11	chr13:96923000-96923400	Enhancers	H9 Cell Line	embryonic stem cell
12	chr13:96923000-96923400	Enhancers	HUES48 Cell Line	embryonic stem cell
13	chr13:96923000-96923400	Enhancers	HUES64 Cell Line	embryonic stem cell
14	chr13:96923000-96923400	Enhancers	iPS-18 Cell Line	embryonic stem cell
15	chr13:96923000-96924000	Enhancers	iPS-15b Cell Line	embryonic stem cell
16	chr13:96923200-96923400	Enhancers	Pancreatic Islets	Pancreatic Islet
17	chr13:96923400-96924200	Weak transcription	Pancreatic Islets	Pancreatic Islet
18	chr13:96924200-96926800	Enhancers	Pancreatic Islets	Pancreatic Islet
19	chr13:96924800-96926600	Weak transcription	Fetal Intestine Small	intestine
20	chr13:96925200-96926400	Weak transcription	Fetal Intestine Large	intestine
21	chr13:96925800-96927800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
22	chr13:96926400-96927800	Enhancers	Fetal Intestine Large	intestine
23	chr13:96926600-96927400	Enhancers	Fetal Intestine Small	intestine
24	chr13:96926600-96927400	Enhancers	Pancreas	Pancrea
25	chr13:96926800-96927800	Weak transcription	Pancreatic Islets	Pancreatic Islet
26	chr13:96927200-96927400	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
27	chr13:96927400-96928200	Weak transcription	Pancreas	Pancrea
28	chr13:96927800-96930400	Enhancers	Pancreatic Islets	Pancreatic Islet
29	chr13:96928200-96928400	Flanking Bivalent TSS/Enh	H1 Derived Mesenchymal Stem Cells	ES cell derived
30	chr13:96928200-96928600	Enhancers	Pancreas	Pancrea
31	chr13:96928200-96929400	Enhancers	Aorta	Aorta
32	chr13:96928400-96929000	Enhancers	Colon Smooth Muscle	Colon
33	chr13:96930400-96931400	Weak transcription	Pancreatic Islets	Pancreatic Islet
34	chr13:96931400-96932000	Enhancers	Pancreatic Islets	Pancreatic Islet
35	chr13:96931600-96932000	Enhancers	iPS-18 Cell Line	embryonic stem cell
36	chr13:96932000-96932200	Flanking Active TSS	Pancreatic Islets	Pancreatic Islet
37	chr13:96932200-96932400	Enhancers	Pancreatic Islets	Pancreatic Islet
38	chr13:96932400-96932600	Flanking Active TSS	Pancreatic Islets	Pancreatic Islet
39	chr13:96932600-96934000	Enhancers	Pancreatic Islets	Pancreatic Islet
40	chr13:96934000-96935000	Weak transcription	Pancreatic Islets	Pancreatic Islet
41	chr13:96935000-96935800	Enhancers	Pancreatic Islets	Pancreatic Islet
42	chr13:96935800-96936800	Weak transcription	Pancreatic Islets	Pancreatic Islet
43	chr13:96936800-96940200	Enhancers	Pancreatic Islets	Pancreatic Islet
44	chr13:96938000-96938400	Enhancers	H9 Cell Line	embryonic stem cell
45	chr13:96938400-96938600	Enhancers	iPS-18 Cell Line	embryonic stem cell
46	chr13:96938400-96938600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
47	chr13:96938400-96946000	Weak transcription	H9 Cell Line	embryonic stem cell
48	chr13:96938600-96946400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
49	chr13:96940400-96941000	Enhancers	HUES64 Cell Line	embryonic stem cell
50	chr13:96941000-96946600	Weak transcription	HUES64 Cell Line	embryonic stem cell

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links