Variant report

Variant	nsv531669
Chromosome Location	chr9:140514663-140852911
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:5999)
CpG islands
(count:6166)
Chromatin interactive
region (count:272)
LncRNA
region (count:22)
Mature miRNA
region (count: 1)
miRNA target
sites (count:3)

(count:5999 , 50 per page) page: 1 2 3 4 5 6 7 ... 120

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr9:140579525-140580074	K562	blood:	n/a	n/a
2	ARID3A	chr9:140584600-140584950	HepG2	liver:	n/a	n/a
3	ARID3A	chr9:140565343-140565821	HepG2	liver:	n/a	n/a
4	ARID3A	chr9:140570924-140570976	K562	blood:	n/a	n/a
5	ARID3A	chr9:140589695-140589979	HepG2	liver:	n/a	n/a
6	ARID3A	chr9:140526287-140526304	HepG2	liver:	n/a	n/a
7	ARID3A	chr9:140567215-140567607	HepG2	liver:	n/a	n/a
8	ARID3A	chr9:140514701-140514718	K562	blood:	n/a	n/a
9	ATF1	chr9:140579568-140579816	K562	blood:	n/a	n/a
10	ATF2	chr9:140761215-140761514	GM12878	blood:	n/a	n/a
11	ATF2	chr9:140639968-140640492	GM12878	blood:	n/a	n/a
12	ATF2	chr9:140641009-140641568	GM12878	blood:	n/a	chr9:140641502-140641509
13	ATF2	chr9:140639164-140639781	GM12878	blood:	n/a	n/a
14	ATF2	chr9:140632555-140633044	GM12878	blood:	n/a	n/a
15	ATF2	chr9:140561222-140562002	H1-hESC	embryonic stem cell:	n/a	n/a
16	ATF2	chr9:140710777-140711402	GM12878	blood:	n/a	n/a
17	ATF2	chr9:140651891-140652508	GM12878	blood:	n/a	n/a
18	ATF2	chr9:140632651-140633030	GM12878	blood:	n/a	n/a
19	ATF2	chr9:140641019-140641614	GM12878	blood:	n/a	chr9:140641502-140641509
20	ATF2	chr9:140655366-140655982	GM12878	blood:	n/a	n/a
21	ATF2	chr9:140653486-140653886	GM12878	blood:	n/a	n/a
22	ATF2	chr9:140653453-140654075	GM12878	blood:	n/a	n/a
23	ATF2	chr9:140656794-140657321	GM12878	blood:	n/a	n/a
24	ATF2	chr9:140573609-140574126	GM12878	blood:	n/a	n/a
25	ATF2	chr9:140656647-140657415	GM12878	blood:	n/a	n/a
26	ATF2	chr9:140615932-140616395	GM12878	blood:	n/a	n/a
27	ATF2	chr9:140561209-140561817	H1-hESC	embryonic stem cell:	n/a	n/a
28	ATF2	chr9:140655367-140655871	GM12878	blood:	n/a	n/a
29	ATF2	chr9:140703449-140703804	GM12878	blood:	n/a	n/a
30	ATF2	chr9:140615735-140616429	GM12878	blood:	n/a	n/a
31	ATF2	chr9:140599708-140600308	GM12878	blood:	n/a	n/a
32	ATF2	chr9:140639148-140639804	GM12878	blood:	n/a	n/a
33	ATF2	chr9:140710782-140711539	GM12878	blood:	n/a	n/a
34	ATF3	chr9:140772113-140772351	H1-hESC	embryonic stem cell:	n/a	chr9:140772176-140772196
35	ATF3	chr9:140523164-140523326	GM12878	blood:	n/a	n/a
36	ATF3	chr9:140772100-140772314	K562	blood:	n/a	chr9:140772176-140772196
37	ATF3	chr9:140522958-140523491	GM12878	blood:	n/a	n/a
38	ATF3	chr9:140851195-140851422	K562	blood:	n/a	n/a
39	ATF3	chr9:140563816-140564115	K562	blood:	n/a	n/a
40	BACH1	chr9:140523076-140523260	K562	blood:	n/a	n/a
41	BACH1	chr9:140570996-140571303	H1-hESC	embryonic stem cell:	n/a	n/a
42	BACH1	chr9:140640186-140640518	K562	blood:	n/a	chr9:140640362-140640376
43	BACH1	chr9:140610803-140610830	K562	blood:	n/a	n/a
44	BACH1	chr9:140573811-140574048	H1-hESC	embryonic stem cell:	n/a	n/a
45	BACH1	chr9:140560252-140560464	H1-hESC	embryonic stem cell:	n/a	n/a
46	BACH1	chr9:140567460-140567647	H1-hESC	embryonic stem cell:	n/a	n/a
47	BACH1	chr9:140563712-140564172	K562	blood:	n/a	n/a
48	BACH1	chr9:140561065-140561826	H1-hESC	embryonic stem cell:	n/a	n/a
49	BACH1	chr9:140618399-140618691	H1-hESC	embryonic stem cell:	n/a	n/a
50	BACH1	chr9:140778170-140778249	H1-hESC	embryonic stem cell:	n/a	n/a

(count:6166 , 50 per page) page: 1 2 3 4 5 6 7 ... 124

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:140780551-140780601	AG10803	skin:	n/a
2	chr9:140674013-140674063	AoSMC	blood vessel:	n/a
3	chr9:140768247-140768297	H1-hESC	embryonic stem cell:	embryo
4	chr9:140731022-140731072	PANC-1	pancreas:	n/a
5	chr9:140727297-140727347	H1-hESC	embryonic stem cell:	embryo
6	chr9:140780551-140780601	AG10803	skin:	n/a
7	chr9:140674013-140674063	AoSMC	blood vessel:	n/a
8	chr9:140768247-140768297	H1-hESC	embryonic stem cell:	embryo
9	chr9:140731022-140731072	PANC-1	pancreas:	n/a
10	chr9:140727297-140727347	H1-hESC	embryonic stem cell:	embryo
11	chr9:140652711-140652761	PANC-1	pancreas:	n/a
12	chr9:140728491-140728541	HRE	kidney:	n/a
13	chr9:140815010-140815060	MCF10A-Er-Src	breast:	n/a
14	chr9:140773129-140773179	HCPEpiC	choroid plexus:	n/a
15	chr9:140673936-140673986	CMK	blood:	n/a
16	chr9:140727297-140727347	T-47D	breast:	n/a
17	chr9:140787445-140787495	ovcar-3	ovarian:	n/a
18	chr9:140731552-140731602	PANC-1	pancreas:	n/a
19	chr9:140729241-140729291	ProgFib	skin:	n/a
20	chr9:140727571-140727621	NB4	blood:	n/a
21	chr9:140703637-140703687	MCF-7	breast:	n/a
22	chr9:140716770-140716820	SK-N-MC	brain:	n/a
23	chr9:140647870-140647920	SK-N-MC	brain:	n/a
24	chr9:140588019-140588069	AG04449	skin:	fetal
25	chr9:140709033-140709083	BJ	skin:	n/a
26	chr9:140671632-140671682	HRE	kidney:	n/a
27	chr9:140515874-140515924	HRCEpiC	kidney:	n/a
28	chr9:140671200-140671250	LNCaP	prostate:	n/a
29	chr9:140704763-140704813	GM19239	blood:	n/a
30	chr9:140657381-140657431	K562	blood:	n/a
31	chr9:140676141-140676191	HRPEpiC	eye:	n/a
32	chr9:140652743-140652793	HRE	kidney:	n/a
33	chr9:140731445-140731495	Hela-S3	cervix:	n/a
34	chr9:140778757-140778807	SK-N-SH_RA	brain:	n/a
35	chr9:140676853-140676903	ovcar-3	ovarian:	n/a
36	chr9:140728301-140728351	NHBE	bronchial:	n/a
37	chr9:140583757-140583807	ProgFib	skin:	n/a
38	chr9:140773129-140773179	HRCEpiC	kidney:	n/a
39	chr9:140738145-140738195	GM12891	blood:	n/a
40	chr9:140675616-140675666	HAEpiC	amniotic membrane:	n/a
41	chr9:140703637-140703687	NT2-D1	testis:	n/a
42	chr9:140525207-140525257	AG09319	gingival:	n/a
43	chr9:140611316-140611366	AG04449	skin:	fetal
44	chr9:140730806-140730856	NB4	blood:	n/a
45	chr9:140772545-140772595	PANC-1	pancreas:	n/a
46	chr9:140814587-140814637	IMR90	lung:	fetal
47	chr9:140709033-140709083	Caco-2	colon:	n/a
48	chr9:140729241-140729291	BE2_C	brain:	n/a
49	chr9:140714075-140714125	AG04450	lung:	fetal
50	chr9:140814587-140814637	GM12878	blood:	n/a

(count:272 , 50 per page) page: 1 2 3 4 5 6

No.	Distal block	Cell Line	Cell type
1	chr9:140636490..140638088-chr9:140638645..140641455,2	MCF-7	breast:
2	chr9:140645397..140647015-chr9:140648908..140650692,2	K562	blood:
3	chr9:140622860..140625208-chr9:140625986..140628407,2	K562	blood:
4	chr9:140700980..140705198-chr9:140707876..140710677,3	K562	blood:
5	chr9:140620597..140623025-chr9:140630074..140631675,2	MCF-7	breast:
6	chr9:140629371..140632191-chr9:140634538..140636839,2	K562	blood:
7	chr9:140841179..140843467-chr9:140845016..140846625,2	K562	blood:
8	chr9:140701752..140704462-chr9:140707799..140711263,3	MCF-7	breast:
9	chr9:140620032..140621601-chr9:140644743..140646680,2	K562	blood:
10	chr9:140499789..140502390-chr9:140557766..140559977,2	MCF-7	breast:
11	chr9:140471859..140474511-chr9:140624763..140627467,2	MCF-7	breast:
12	chr9:140570597..140573721-chr9:140580223..140583053,3	MCF-7	breast:
13	chr9:140523195..140524833-chr9:140524940..140527470,2	MCF-7	breast:
14	chr9:140588341..140590402-chr9:140592569..140594596,2	K562	blood:
15	chr9:140509926..140512200-chr9:140526442..140528104,2	MCF-7	breast:
16	chr9:140575772..140578110-chr9:140581931..140583477,2	MCF-7	breast:
17	chr9:140551438..140555515-chr9:140557149..140559917,3	MCF-7	breast:
18	chr9:140512926..140516965-chr9:140518236..140522251,5	MCF-7	breast:
19	chr9:140485611..140487134-chr9:140558504..140560713,2	MCF-7	breast:
20	chr9:140497340..140502310-chr9:140563850..140568927,6	K562	blood:
21	chr9:140566098..140569110-chr9:140572669..140575691,4	MCF-7	breast:
22	chr9:140563812..140566450-chr9:140570445..140574038,3	K562	blood:
23	chr9:140662415..140665334-chr9:140667330..140669473,2	MCF-7	breast:
24	chr9:140541151..140543199-chr9:140557554..140559869,2	MCF-7	breast:
25	chr9:140629371..140632191-chr9:140634538..140636839,2	K562	blood:
26	chr9:140610530..140612311-chr9:140612330..140615282,2	K562	blood:
27	chr9:140576034..140577675-chr9:140577860..140579633,2	K562	blood:
28	chr9:140476962..140479956-chr9:140536689..140538723,2	MCF-7	breast:
29	chr9:140498669..140500543-chr9:140525332..140527942,2	K562	blood:
30	chr9:140499260..140502923-chr9:140667967..140671652,3	MCF-7	breast:
31	chr9:140498546..140502613-chr9:140552404..140554090,3	K562	blood:
32	chr9:140722366..140725361-chr9:140730961..140733725,2	MCF-7	breast:
33	chr9:140498043..140499599-chr9:140558636..140561270,2	MCF-7	breast:
34	chr9:140541289..140544175-chr9:140560001..140562975,2	K562	blood:
35	chr9:140616597..140619590-chr9:140626319..140628863,2	K562	blood:
36	chr9:140775069..140778564-chr9:140787877..140791721,3	MCF-7	breast:
37	chr9:140481185..140483242-chr9:140565190..140566987,2	K562	blood:
38	chr9:140667022..140668743-chr9:140670497..140672972,3	MCF-7	breast:
39	chr9:140844057..140846982-chr9:140852715..140855154,2	MCF-7	breast:
40	chr9:140512170..140514600-chr9:140538200..140540261,3	K562	blood:
41	chr9:140467532..140470216-chr9:140512251..140515096,2	MCF-7	breast:
42	chr9:140637728..140639474-chr9:140643254..140646123,2	K562	blood:
43	chr9:140523195..140524833-chr9:140524940..140527470,2	MCF-7	breast:
44	chr9:140473487..140475608-chr9:140520167..140523048,2	K562	blood:
45	chr9:140512574..140516809-chr9:140521486..140524902,8	K562	blood:
46	chr9:140445002..140446703-chr9:140512317..140515053,2	MCF-7	breast:
47	chr9:140499757..140501674-chr9:140525440..140528295,2	MCF-7	breast:
48	chr9:140567130..140567958-chr9:140589475..140590450,2	MCF-7	breast:
49	chr9:140639569..140641263-chr9:140644746..140647470,2	MCF-7	breast:
50	chr9:140611220..140612891-chr9:140615717..140617300,2	K562	blood:

(count:22 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-AL772363.1-1	chr9:140768516-140768684	XLOC_007904
2	lnc-AL772363.1-1	chr9:140771009-140771749	XLOC_007904
3	lnc-AL772363.1-1	chr9:140768516-140768666	ENSG00000203987.2
4	lnc-AL772363.1-5	chr9:140682117-140683139	NONHSAT135752
5	lnc-AL772363.1-3	chr9:140843115-140843211	NONHSAT135761
6	lnc-AL772363.1-1	chr9:140769915-140770132	XLOC_007904
7	lnc-AL772363.1-1	chr9:140784498-140787022	ENSG00000203987.2
8	lnc-AL772363.1-1	chr9:140768516-140768684	XLOC_007904
9	lnc-AL772363.1-1	chr9:140768516-140768684	XLOC_007904
10	lnc-AL772363.1-1	chr9:140767517-140767710	XLOC_007904
11	lnc-AL772363.1-1	chr9:140777289-140777454	ENSG00000203987.2
12	lnc-AL772363.1-1	chr9:140769915-140770132	XLOC_007904
13	lnc-AL772363.1-1	chr9:140769915-140770132	ENSG00000203987.2
14	lnc-AL772363.1-4	chr9:140703295-140703875	NONHSAT135753
15	lnc-CACNA1B-4	chr9:140657474-140659224	NONHSAT135751
16	lnc-AL772363.1-1	chr9:140771009-140771749	XLOC_007904
17	lnc-AL772363.1-1	chr9:140769915-140770844	XLOC_007904
18	lnc-AL772363.1-1	chr9:140767616-140767710	XLOC_007904
19	lnc-AL772363.1-1	chr9:140762379-140762689	ENSG00000203987.2
20	lnc-AL772363.1-1	chr9:140762377-140762689	ENSG00000203987.2
21	lnc-AL772363.1-3	chr9:140843618-140844002	NONHSAT135761
22	lnc-AL772363.1-1	chr9:140762365-140762689	XLOC_007904

miRNA name	Chromosome Location	mirBase accession
hsa-miR-602	chr9:140732886-140732908	MIMAT0003270

(count:3 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location
1	EHMT1	hsa-miR-30e-5p	chr9:140730456-140730473
2	EHMT1	hsa-miR-1	chr9:140730432-140730455
3	EHMT1	hsa-miR-615-3p	chr9:140729903-140729924

Variant related genes	Relation type
SETP5	TF binding region
CACNA1B	TF binding region
ENSG00000203987	TF binding region
MIR602	TF binding region
EHMT1	TF binding region
ENSG00000255585	TF binding region
C9orf37	TF binding region
SETP5	CpG island
CACNA1B	CpG island
ENSG00000203987	CpG island
MIR602	CpG island
EHMT1	CpG island
ENSG00000255585	CpG island
C9orf37	CpG island
ENSG00000207693	chromatin interactions
ENSG00000181090	chromatin interactions
ENSG00000148408	chromatin interactions
ENSG00000182154	chromatin interactions
ENSG00000233998	chromatin interactions
ENSG00000198435	chromatin interactions
ENSG00000141556	chromatin interactions
ENSG00000245080	chromatin interactions
ENSG00000130653	chromatin interactions
ENSG00000173653	chromatin interactions
ENSG00000165724	chromatin interactions
ENSG00000203993	chromatin interactions
ENSG00000197070	chromatin interactions
ENSG00000148399	chromatin interactions
ENSG00000255585	chromatin interactions
PRRG1	miRNA target sites
AKAP11	miRNA target sites
GPM6A	miRNA target sites
ACIN1	miRNA target sites

Extended variants
information (count: 15226 )
Associated
traits (count: 20 )

Variant overlapped rSNPs/rCNVs (count:15226 , 50 per page) page: 1 2 3 4 5 6 7 ... 305

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs143481983	chr9:140514683-140514684	Flanking Active TSS Active TSS Weak transcription Enhancers	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
2	rs573022314	chr9:140514815-140514816	Enhancers Weak transcription Active TSS Genic enhancers Flanking Active TSS	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
3	rs377169671	chr9:140514825-140514826	Enhancers Weak transcription Active TSS Genic enhancers Flanking Active TSS	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
4	rs1006498	chr9:140514826-140514827	Enhancers Weak transcription Active TSS Genic enhancers Flanking Active TSS	TF binding region Chromatin interactive region	9 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
5	rs113696903	chr9:140514857-140514858	Enhancers Weak transcription Active TSS Genic enhancers Flanking Active TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
6	rs146727946	chr9:140514870-140514871	Enhancers Weak transcription Active TSS Genic enhancers Flanking Active TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
7	rs1571439	chr9:140514873-140514874	Enhancers Weak transcription Active TSS Genic enhancers Flanking Active TSS	TF binding region Chromatin interactive region	8 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
8	rs189101556	chr9:140514915-140514916	Enhancers Weak transcription Active TSS Genic enhancers Flanking Active TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
9	rs528587192	chr9:140514930-140514931	Enhancers Weak transcription Active TSS Genic enhancers Flanking Active TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
10	rs142574648	chr9:140514945-140514946	Enhancers Weak transcription Active TSS Genic enhancers Flanking Active TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
11	rs564960513	chr9:140514961-140514962	Enhancers Weak transcription Active TSS Genic enhancers Flanking Active TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
12	rs530780638	chr9:140514977-140514978	Enhancers Weak transcription Active TSS Genic enhancers Flanking Active TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
13	rs71510835	chr9:140514985-140514986	Enhancers Weak transcription Active TSS Genic enhancers Flanking Active TSS	TF binding region Chromatin interactive region	8 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
14	rs567647184	chr9:140514987-140514988	Enhancers Weak transcription Active TSS Genic enhancers Flanking Active TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
15	rs575618553	chr9:140515017-140515018	Flanking Active TSS Genic enhancers Enhancers Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
16	rs192028891	chr9:140515023-140515024	Flanking Active TSS Genic enhancers Enhancers Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
17	rs184097926	chr9:140515054-140515055	Flanking Active TSS Genic enhancers Enhancers Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
18	rs188434494	chr9:140515083-140515084	Flanking Active TSS Genic enhancers Enhancers Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
19	rs73581264	chr9:140515143-140515144	Flanking Active TSS Genic enhancers Enhancers Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region Chromatin interactive region	7 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
20	rs150948353	chr9:140515154-140515155	Flanking Active TSS Genic enhancers Enhancers Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
21	rs180921893	chr9:140515159-140515160	Flanking Active TSS Genic enhancers Enhancers Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
22	rs537073962	chr9:140515194-140515195	Flanking Active TSS Genic enhancers Enhancers Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
23	rs1571440	chr9:140515211-140515212	Flanking Active TSS Genic enhancers Enhancers Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region Chromatin interactive region	7 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
24	rs574026652	chr9:140515229-140515230	Flanking Active TSS Genic enhancers Enhancers Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
25	rs71510836	chr9:140515253-140515254	Flanking Active TSS Genic enhancers Enhancers Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region Chromatin interactive region	7 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
26	rs560887267	chr9:140515277-140515278	Flanking Active TSS Genic enhancers Enhancers Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
27	rs572967660	chr9:140515337-140515338	Flanking Active TSS Genic enhancers Enhancers Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
28	rs369611624	chr9:140515389-140515390	Flanking Active TSS Genic enhancers Enhancers Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
29	rs556273565	chr9:140515398-140515399	Flanking Active TSS Genic enhancers Enhancers Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
30	rs573439923	chr9:140515449-140515450	Transcr. at gene 5' and 3' Genic enhancers Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
31	rs78909368	chr9:140515483-140515484	Transcr. at gene 5' and 3' Genic enhancers Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
32	rs113228810	chr9:140515504-140515505	Transcr. at gene 5' and 3' Genic enhancers Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
33	rs185918185	chr9:140515665-140515666	Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
34	rs560937389	chr9:140515695-140515696	Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
35	rs530334677	chr9:140515696-140515697	Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
36	rs547223048	chr9:140515707-140515708	Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
37	rs566971942	chr9:140515731-140515732	Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
38	rs539186413	chr9:140515734-140515735	Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
39	rs552476207	chr9:140515773-140515774	Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
40	rs571416020	chr9:140515807-140515808	Weak transcription Enhancers Strong transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
41	rs10867031	chr9:140515875-140515876	Weak transcription Enhancers Strong transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region CpG island Chromatin interactive region	6 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
42	rs190393071	chr9:140515946-140515947	Weak transcription Enhancers Strong transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
43	rs75559246	chr9:140515975-140515976	Weak transcription Enhancers Strong transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
44	rs140767527	chr9:140515976-140515977	Weak transcription Enhancers Strong transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
45	rs112862497	chr9:140516003-140516004	Weak transcription Enhancers Strong transcription Genic enhancers Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
46	rs182583070	chr9:140516004-140516005	Weak transcription Enhancers Strong transcription Genic enhancers Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
47	rs370209033	chr9:140516046-140516047	Weak transcription Enhancers Strong transcription Genic enhancers Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
48	rs573039122	chr9:140516068-140516069	Weak transcription Enhancers Strong transcription Genic enhancers Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
49	rs186402632	chr9:140516112-140516113	Weak transcription Enhancers Strong transcription Genic enhancers Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
50	rs117363506	chr9:140516120-140516121	Weak transcription Enhancers Strong transcription Genic enhancers Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:20)

Disease	PMID	Source
Leukemia	17361228	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Glioblastoma	16823260	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Cardiac fibroma	18329553	CNVD
Lung cancer	19147751	CNVD
Cervical cancer	17311676	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Gastric cancer	17908304	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Salivary gland adenoid cystic carcinoma	17545515	CNVD
Chordoma	18071362	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Sudden cardiac death	19188705	CNVD
Myoepithelioma	18604193	CNVD
Tuberous sclerosis	19566914	CNVD
Multiple myeloma	16616336	CNVD
Acute lymphoblastic leukemia	19100363	CNVD
Mantle cell lymphoma	19029149	CNVD
Breast cancer	21509527	CNVD

Chromatin state (count:10684 , 50 per page) page: 1 2 3 4 5 6 7 ... 214

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:140512200-140514800	Active TSS	Pancreatic Islets	Pancreatic Islet
2	chr9:140512200-140515000	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
3	chr9:140512200-140515400	Active TSS	H9 Cell Line	embryonic stem cell
4	chr9:140512200-140515600	Active TSS	iPS-20b Cell Line	embryonic stem cell
5	chr9:140512400-140514800	Active TSS	Psoas Muscle	Psoas
6	chr9:140512400-140514800	Active TSS	Small Intestine	intestine
7	chr9:140512400-140515200	Active TSS	HUES6 Cell Line	embryonic stem cell
8	chr9:140512400-140515200	Active TSS	HUES64 Cell Line	embryonic stem cell
9	chr9:140512600-140514800	Active TSS	H1 Cell Line	embryonic stem cell
10	chr9:140512600-140514800	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
11	chr9:140512600-140514800	Active TSS	HSMMtube	muscle
12	chr9:140512600-140515000	Active TSS	GM12878-XiMat	blood
13	chr9:140512800-140514800	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
14	chr9:140512800-140514800	Active TSS	Fetal Muscle Trunk	muscle
15	chr9:140512800-140515000	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
16	chr9:140513000-140515200	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
17	chr9:140513800-140515600	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
18	chr9:140514000-140514800	Flanking Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
19	chr9:140514000-140514800	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
20	chr9:140514000-140514800	Flanking Active TSS	Primary hematopoietic stem cells	blood
21	chr9:140514000-140514800	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
22	chr9:140514000-140514800	Flanking Active TSS	Primary T regulatory cells fromperipheralblood	blood
23	chr9:140514000-140514800	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
24	chr9:140514000-140515000	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
25	chr9:140514000-140515200	Flanking Active TSS	Primary B cells from cord blood	blood
26	chr9:140514000-140515600	Flanking Active TSS	Stomach Smooth Muscle	stomach
27	chr9:140514000-140515800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
28	chr9:140514000-140516200	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
29	chr9:140514200-140514800	Flanking Active TSS	Primary monocytes fromperipheralblood	blood
30	chr9:140514200-140514800	Flanking Active TSS	Primary T helper memory cells from peripheral blood 2	blood
31	chr9:140514200-140514800	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
32	chr9:140514200-140514800	Flanking Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
33	chr9:140514200-140514800	Flanking Active TSS	Cortex derived primary cultured neurospheres	brain
34	chr9:140514200-140514800	Flanking Active TSS	Liver	Liver
35	chr9:140514200-140514800	Flanking Active TSS	Colon Smooth Muscle	Colon
36	chr9:140514200-140514800	Flanking Active TSS	Duodenum Mucosa	Duodenum
37	chr9:140514200-140514800	Flanking Active TSS	Duodenum Smooth Muscle	Duodenum
38	chr9:140514200-140514800	Flanking Active TSS	Fetal Intestine Small	intestine
39	chr9:140514200-140514800	Flanking Active TSS	Rectal Mucosa Donor 29	rectum
40	chr9:140514200-140514800	Flanking Active TSS	Rectal Mucosa Donor 31	rectum
41	chr9:140514200-140514800	Flanking Active TSS	K562	blood
42	chr9:140514200-140514800	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
43	chr9:140514200-140514800	Flanking Active TSS	NHEK	skin
44	chr9:140514200-140514800	Flanking Active TSS	Osteobl	bone
45	chr9:140514200-140515000	Flanking Active TSS	Fetal Adrenal Gland	Adrenal Gland
46	chr9:140514200-140515000	Flanking Active TSS	Dnd41	blood
47	chr9:140514200-140515200	Flanking Active TSS	Primary T cells from cord blood	blood
48	chr9:140514200-140515400	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
49	chr9:140514200-140515400	Flanking Active TSS	Hela-S3	cervix
50	chr9:140514200-140515600	Flanking Active TSS	Fetal Brain Female	brain

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