Variant report
Variant | nsv533420 |
---|---|
Chromosome Location | chr8:35358115-36227536 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:2417)
- CpG islands (count:1952)
- Chromatin interactive region (count:48)
- LncRNA region (count:26)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | ARID3A | chr8:35998781-35999050 | K562 | blood: | n/a | n/a |
2 | ARID3A | chr8:35998754-35999027 | HepG2 | liver: | n/a | n/a |
3 | ARID3A | chr8:35483342-35483547 | HepG2 | liver: | n/a | chr8:35483503-35483519 chr8:35483504-35483520 |
4 | ATF1 | chr8:35694479-35694576 | K562 | blood: | n/a | n/a |
5 | ATF1 | chr8:35359837-35359860 | K562 | blood: | n/a | n/a |
6 | ATF1 | chr8:35535442-35535506 | K562 | blood: | n/a | n/a |
7 | ATF2 | chr8:35449571-35450010 | GM12878 | blood: | n/a | n/a |
8 | ATF2 | chr8:35402765-35403153 | H1-hESC | embryonic stem cell: | n/a | n/a |
9 | ATF2 | chr8:35449456-35450056 | GM12878 | blood: | n/a | n/a |
10 | ATF2 | chr8:35718359-35718833 | GM12878 | blood: | n/a | n/a |
11 | ATF2 | chr8:35718465-35718780 | GM12878 | blood: | n/a | n/a |
12 | ATF2 | chr8:35402728-35403206 | H1-hESC | embryonic stem cell: | n/a | n/a |
13 | BACH1 | chr8:35402916-35403184 | H1-hESC | embryonic stem cell: | n/a | chr8:35402948-35402962 |
14 | BACH1 | chr8:36139227-36139586 | H1-hESC | embryonic stem cell: | n/a | n/a |
15 | BACH1 | chr8:35801904-35802359 | H1-hESC | embryonic stem cell: | n/a | n/a |
16 | BACH1 | chr8:35817981-35818072 | K562 | blood: | n/a | n/a |
17 | BACH1 | chr8:36126038-36126313 | H1-hESC | embryonic stem cell: | n/a | n/a |
18 | BACH1 | chr8:35480385-35480401 | K562 | blood: | n/a | n/a |
19 | BACH1 | chr8:35424139-35424252 | H1-hESC | embryonic stem cell: | n/a | n/a |
20 | BACH1 | chr8:35524193-35524227 | K562 | blood: | n/a | n/a |
21 | BACH1 | chr8:35874478-35874818 | H1-hESC | embryonic stem cell: | n/a | n/a |
22 | BACH1 | chr8:35973723-35973757 | K562 | blood: | n/a | n/a |
23 | BACH1 | chr8:36139222-36139571 | K562 | blood: | n/a | n/a |
24 | BATF | chr8:35767333-35767578 | GM12878 | blood: | n/a | n/a |
25 | BATF | chr8:35718466-35718742 | GM12878 | blood: | n/a | chr8:35718642-35718652 |
26 | BATF | chr8:35718379-35718751 | GM12878 | blood: | n/a | chr8:35718642-35718652 |
27 | BATF | chr8:35952817-35953061 | GM12878 | blood: | n/a | chr8:35952957-35952968 |
28 | BCL11A | chr8:35718409-35718777 | GM12878 | blood: | n/a | n/a |
29 | BCL11A | chr8:35718438-35718749 | GM12878 | blood: | n/a | n/a |
30 | BCL11A | chr8:35755403-35755668 | GM12878 | blood: | n/a | n/a |
31 | BHLHE40 | chr8:36127900-36128094 | HepG2 | liver: | n/a | n/a |
32 | BHLHE40 | chr8:35768471-35768657 | GM12878 | blood: | n/a | n/a |
33 | BHLHE40 | chr8:35755372-35755653 | GM12878 | blood: | n/a | n/a |
34 | BRCA1 | chr8:35916503-35916505 | GM12878 | blood: | n/a | n/a |
35 | BRCA1 | chr8:35725959-35725973 | GM12878 | blood: | n/a | n/a |
36 | CBX3 | chr8:35817194-35817452 | K562 | blood: | n/a | n/a |
37 | CCNT2 | chr8:35527398-35527598 | K562 | blood: | n/a | n/a |
38 | CEBPB | chr8:35555536-35555860 | H1-hESC | embryonic stem cell: | n/a | n/a |
39 | CEBPB | chr8:35637870-35638208 | A549 | lung: | n/a | chr8:35638032-35638041 chr8:35638031-35638042 |
40 | CEBPB | chr8:35802637-35802717 | H1-hESC | embryonic stem cell: | n/a | n/a |
41 | CEBPB | chr8:35587784-35588055 | K562 | blood: | n/a | chr8:35587949-35587960 chr8:35587950-35587959 chr8:35587948-35587961 chr8:35587948-35587959 |
42 | CEBPB | chr8:35367904-35368119 | A549 | lung: | n/a | n/a |
43 | CEBPB | chr8:36081963-36082234 | HepG2 | liver: | n/a | chr8:36082096-36082107 |
44 | CEBPB | chr8:35575000-35575611 | H1-hESC | embryonic stem cell: | n/a | n/a |
45 | CEBPB | chr8:36202344-36202662 | H1-hESC | embryonic stem cell: | n/a | chr8:36202485-36202494 chr8:36202483-36202496 chr8:36202484-36202495 chr8:36202483-36202494 chr8:36202485-36202494 chr8:36202485-36202494 chr8:36202485-36202494 |
46 | CEBPB | chr8:35914872-35915081 | HepG2 | liver: | n/a | chr8:35914963-35914974 chr8:35914965-35914976 chr8:35914965-35914974 |
47 | CEBPB | chr8:35643318-35643686 | HepG2 | liver: | n/a | chr8:35643499-35643510 |
48 | CEBPB | chr8:36199377-36199577 | K562 | blood: | n/a | chr8:36199406-36199419 chr8:36199406-36199419 |
49 | CEBPB | chr8:36005039-36005743 | A549 | lung: | n/a | chr8:36005181-36005192 |
50 | CEBPB | chr8:35998793-35999054 | H1-hESC | embryonic stem cell: | n/a | n/a |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr8:35979338-35979388 | NH-A | brain: | n/a |
2 | chr8:35391321-35391371 | HRPEpiC | eye: | n/a |
3 | chr8:35576222-35576272 | HCPEpiC | choroid plexus: | n/a |
4 | chr8:35649016-35649066 | SK-N-SH | brain: | n/a |
5 | chr8:35440771-35440821 | AG10803 | skin: | n/a |
6 | chr8:35979108-35979158 | GM12892 | blood: | n/a |
7 | chr8:35762637-35762687 | HEK293 | kidney: | embryo |
8 | chr8:35576222-35576272 | HL-60 | blood: | n/a |
9 | chr8:35580715-35580765 | HEEpiC | esophagus: | n/a |
10 | chr8:35979108-35979158 | SK-N-MC | brain: | n/a |
11 | chr8:35580432-35580482 | HCM | heart: | n/a |
12 | chr8:35452334-35452384 | PANC-1 | pancreas: | n/a |
13 | chr8:35979325-35979375 | HRCEpiC | kidney: | n/a |
14 | chr8:35392042-35392092 | H1-hESC | embryonic stem cell: | embryo |
15 | chr8:35452334-35452384 | AG09319 | gingival: | n/a |
16 | chr8:35803167-35803217 | HepG2 | liver: | n/a |
17 | chr8:35731494-35731544 | SK-N-SH_RA | brain: | n/a |
18 | chr8:35762637-35762687 | NHBE | bronchial: | n/a |
19 | chr8:35391321-35391371 | AoSMC | blood vessel: | n/a |
20 | chr8:35581526-35581576 | SKMC | muscle: | n/a |
21 | chr8:35580715-35580765 | K562 | blood: | n/a |
22 | chr8:35576222-35576272 | HUVEC | blood vessel: | n/a |
23 | chr8:35580715-35580765 | HRCEpiC | kidney: | n/a |
24 | chr8:35580715-35580765 | SK-N-SH | brain: | n/a |
25 | chr8:35401908-35401958 | HEEpiC | esophagus: | n/a |
26 | chr8:35979325-35979375 | Jurkat | blood: | n/a |
27 | chr8:35979033-35979083 | PrEC | prostate: | n/a |
28 | chr8:35440771-35440821 | SK-N-SH_RA | brain: | n/a |
29 | chr8:35979338-35979388 | NHBE | bronchial: | n/a |
30 | chr8:35580715-35580765 | GM06990 | blood: | n/a |
31 | chr8:35401313-35401363 | ovcar-3 | ovarian: | n/a |
32 | chr8:35979179-35979229 | HCF | heart: | n/a |
33 | chr8:35401742-35401792 | SK-N-MC | brain: | n/a |
34 | chr8:35803167-35803217 | ovcar-3 | ovarian: | n/a |
35 | chr8:35401742-35401792 | RPTEC | kidney: | n/a |
36 | chr8:35580432-35580482 | BE2_C | brain: | n/a |
37 | chr8:35685207-35685257 | GM06990 | blood: | n/a |
38 | chr8:35979108-35979158 | HUVEC | blood vessel: | n/a |
39 | chr8:35685207-35685257 | Hepatocyte | liver: | n/a |
40 | chr8:35581526-35581576 | GM12891 | blood: | n/a |
41 | chr8:35392042-35392092 | ProgFib | skin: | n/a |
42 | chr8:35440771-35440821 | MCF-7 | breast: | n/a |
43 | chr8:35452334-35452384 | AoSMC | blood vessel: | n/a |
44 | chr8:35744638-35744688 | HRPEpiC | eye: | n/a |
45 | chr8:35576222-35576272 | CMK | blood: | n/a |
46 | chr8:35580715-35580765 | AG04450 | lung: | fetal |
47 | chr8:35401670-35401720 | PrEC | prostate: | n/a |
48 | chr8:35649016-35649066 | PrEC | prostate: | n/a |
49 | chr8:35979179-35979229 | Hepatocyte | liver: | n/a |
50 | chr8:35540239-35540289 | MCF-7 | breast: | n/a |
(count:48 , 50 per page) page:
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No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr8:36214537..36217375-chr8:36218045..36219768,2 | K562 | blood: | |
2 | chr7:98429076..98431489-chr8:36223053..36226052,2 | MCF-7 | breast: | |
3 | chr8:35596968..35598886-chr8:35604620..35606278,2 | K562 | blood: | |
4 | chr17:41401117..41402640-chr8:35678068..35679569,2 | K562 | blood: | |
5 | chr17:41464397..41466335-chr8:35678069..35679588,3 | K562 | blood: | |
6 | chr8:36184128..36185820-chr8:36198877..36200625,2 | K562 | blood: | |
7 | chr8:35018612..35019300-chr8:35998668..35999178,2 | MCF-7 | breast: | |
8 | chr8:35296451..35297364-chr8:35998554..35999313,2 | MCF-7 | breast: | |
9 | chr8:35899435..35901974-chr8:35902766..35905726,2 | K562 | blood: | |
10 | chr8:35899435..35901974-chr8:35902766..35905726,2 | K562 | blood: | |
11 | chr8:35787657..35788212-chr8:35806131..35807030,2 | MCF-7 | breast: | |
12 | chr17:41463858..41466219-chr8:35678069..35679569,3 | K562 | blood: | |
13 | chr8:35638386..35640452-chr8:35642289..35644463,2 | K562 | blood: | |
14 | chr8:35431521..35433590-chr8:35435377..35437047,2 | K562 | blood: | |
15 | chr8:35998628..35999297-chr8:36630776..36631627,3 | MCF-7 | breast: | |
16 | chr8:35744346..35744912-chr8:35998590..35999359,2 | MCF-7 | breast: | |
17 | chr8:35497530..35499054-chr8:35564853..35566842,2 | K562 | blood: | |
18 | chr8:36173773..36176086-chr8:36196865..36199430,2 | MCF-7 | breast: | |
19 | chr8:35787657..35788212-chr8:35806131..35807030,2 | MCF-7 | breast: | |
20 | chr8:35638386..35640452-chr8:35642289..35644463,2 | K562 | blood: | |
21 | chr8:35452680..35453282-chr8:35998615..35999410,2 | MCF-7 | breast: | |
22 | chr8:35009843..35010391-chr8:35998408..35998917,2 | MCF-7 | breast: | |
23 | chr17:41398363..41402584-chr8:35679569..35681089,3 | K562 | blood: | |
24 | chr8:35009829..35010450-chr8:35998446..35999665,3 | MCF-7 | breast: | |
25 | chr8:36214348..36217156-chr8:36228449..36231444,2 | MCF-7 | breast: | |
26 | chr8:36173773..36176086-chr8:36196865..36199430,2 | MCF-7 | breast: | |
27 | chr8:35431521..35433590-chr8:35435377..35437047,2 | K562 | blood: | |
28 | chr17:41399296..41402359-chr8:35678068..35681088,3 | MCF-7 | breast: | |
29 | chr8:36214537..36217375-chr8:36218045..36219768,2 | K562 | blood: | |
30 | chr17:41380631..41382205-chr8:35678068..35679588,2 | MCF-7 | breast: | |
31 | chr3:73158515..73160568-chr8:35679569..35681069,2 | K562 | blood: | |
32 | chr8:35452680..35453282-chr8:35998615..35999410,2 | MCF-7 | breast: | |
33 | chr8:36036347..36039298-chr8:36039472..36041633,2 | MCF-7 | breast: | |
34 | chr8:35993182..35994756-chr8:35996509..35999089,2 | K562 | blood: | |
35 | chr8:33663430..33663957-chr8:35744542..35745198,2 | MCF-7 | breast: | |
36 | chr3:73159093..73162068-chr8:35678068..35679569,2 | MCF-7 | breast: | |
37 | chr8:35744346..35744912-chr8:35998590..35999359,2 | MCF-7 | breast: | |
38 | chr8:36215520..36217788-chr8:36221980..36223861,2 | K562 | blood: | |
39 | chr8:36184128..36185820-chr8:36198877..36200625,2 | K562 | blood: | |
40 | chr8:35596968..35598886-chr8:35604620..35606278,2 | K562 | blood: | |
41 | chr8:35620195..35622822-chr8:35626883..35629554,2 | K562 | blood: | |
42 | chr8:36036347..36039298-chr8:36039472..36041633,2 | MCF-7 | breast: | |
43 | chr13:35589705..35590705-chr8:36059332..36059852,2 | MCF-7 | breast: | |
44 | chr17:41400768..41402617-chr8:35678068..35679569,3 | K562 | blood: | |
45 | chr8:35497530..35499054-chr8:35564853..35566842,2 | K562 | blood: | |
46 | chr8:35993182..35994756-chr8:35996509..35999089,2 | K562 | blood: | |
47 | chr8:36215520..36217788-chr8:36221980..36223861,2 | K562 | blood: | |
48 | chr8:35620195..35622822-chr8:35626883..35629554,2 | K562 | blood: |
(count:26 , 50 per page) page:
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No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-RP11-419C23.1.1-4 | chr8:35861834-35862110 | ENSG00000253524 |
2 | lnc-UNC5D-2 | chr8:35750072-35750201 | ENSG00000253452 |
3 | lnc-UNC5D-2 | chr8:35757901-35758022 | ENSG00000253452 |
4 | lnc-UNC5D-2 | chr8:35788183-35788228 | ENSG00000253452 |
5 | lnc-RP11-419C23.1.1-11 | chr8:36083091-36083154 | NONHSAT126011 |
6 | lnc-UNC5D-5 | chr8:36124003-36124282 | NONHSAT126012 |
7 | lnc-UNC5D-2 | chr8:35720025-35720138 | ENSG00000253452 |
8 | lnc-UNC5D-2 | chr8:35783552-35783638 | ENSG00000253452 |
9 | lnc-UNC5D-2 | chr8:35719641-35719668 | ENSG00000253452 |
10 | lnc-RP11-419C23.1.1-8 | chr8:36178665-36178922 | NONHSAT126017 |
11 | lnc-UNC5D-2 | chr8:35757901-35758022 | ENSG00000253452 |
12 | lnc-UNC5D-2 | chr8:35828131-35828183 | ENSG00000253452 |
13 | lnc-RP11-419C23.1.1-9 | chr8:36137009-36137214 | NONHSAT126015 |
14 | lnc-UNC5D-2 | chr8:35750072-35750201 | ENSG00000253452 |
15 | lnc-RP11-419C23.1.1-8 | chr8:36178557-36178598 | NONHSAT126017 |
16 | lnc-RP11-419C23.1.1-4 | chr8:35951496-35951527 | ENSG00000253524 |
17 | lnc-RP11-419C23.1.1-4 | chr8:35892385-35892466 | ENSG00000253524 |
18 | lnc-RP11-419C23.1.1-4 | chr8:35951496-35951543 | ENSG00000253524 |
19 | lnc-UNC5D-6 | chr8:36136478-36137001 | NONHSAT126014 |
20 | lnc-RP11-419C23.1.1-4 | chr8:35861838-35862110 | ENSG00000253524 |
21 | lnc-UNC5D-2 | chr8:35801762-35801920 | ENSG00000253452 |
22 | lnc-RP11-419C23.1.1-12 | chr8:35978916-35979201 | NONHSAT126010 |
23 | lnc-UNC5D-2 | chr8:35720027-35720138 | ENSG00000253452 |
24 | lnc-RP11-419C23.1.1-11 | chr8:36088465-36088673 | NONHSAT126011 |
25 | lnc-UNC5D-2 | chr8:35787238-35787275 | ENSG00000253452 |
26 | lnc-RP11-419C23.1.1-4 | chr8:35952530-35952564 | ENSG00000253524 |
No data |
No data |
Variant related genes | Relation type |
---|---|
UNC5D | TF binding region |
RNU6-533P | TF binding region |
ENSG00000254309 | TF binding region |
ENSG00000253504 | TF binding region |
ENSG00000253685 | TF binding region |
MTND6P19 | TF binding region |
ENSG00000253610 | TF binding region |
ENSG00000254320 | TF binding region |
ENSG00000253452 | TF binding region |
ENSG00000253524 | TF binding region |
LSM12P1 | TF binding region |
RN7SKP201 | TF binding region |
ENSG00000233863 | TF binding region |
UNC5D | CpG island |
RNU6-533P | CpG island |
ENSG00000254309 | CpG island |
ENSG00000253504 | CpG island |
ENSG00000253685 | CpG island |
MTND6P19 | CpG island |
ENSG00000253610 | CpG island |
ENSG00000254320 | CpG island |
ENSG00000253452 | CpG island |
ENSG00000253524 | CpG island |
LSM12P1 | CpG island |
RN7SKP201 | CpG island |
ENSG00000233863 | CpG island |
ENSG00000188825 | chromatin interactions |
ENSG00000223247 | chromatin interactions |
ENSG00000236383 | chromatin interactions |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs113633482 | chr8:35358152-35358153 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
2 | rs372012849 | chr8:35358157-35358158 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
3 | rs559227675 | chr8:35358199-35358200 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
4 | rs577461365 | chr8:35358200-35358201 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
5 | rs375902784 | chr8:35358230-35358231 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
6 | rs541648363 | chr8:35358261-35358262 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
7 | rs112385815 | chr8:35358283-35358284 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
8 | rs142711126 | chr8:35358294-35358295 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
9 | rs574644008 | chr8:35358295-35358296 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
10 | rs192625788 | chr8:35358432-35358433 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
11 | rs150507590 | chr8:35358433-35358434 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
12 | rs568765565 | chr8:35358438-35358439 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
13 | rs34532946 | chr8:35358464-35358465 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
14 | rs573184249 | chr8:35358465-35358466 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
15 | rs370305800 | chr8:35358468-35358469 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
16 | rs530968549 | chr8:35358572-35358573 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
17 | rs552285791 | chr8:35358606-35358607 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
18 | rs184499100 | chr8:35358618-35358619 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
19 | rs117827874 | chr8:35358622-35358623 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
20 | rs139482136 | chr8:35358683-35358684 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
21 | rs149687678 | chr8:35358696-35358697 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
22 | rs568080072 | chr8:35358713-35358714 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
23 | rs548342241 | chr8:35358763-35358764 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
24 | rs569632055 | chr8:35358786-35358787 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
25 | rs116004893 | chr8:35358799-35358800 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
26 | rs189268659 | chr8:35358816-35358817 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
27 | rs535419507 | chr8:35358855-35358856 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
28 | rs76180405 | chr8:35358869-35358870 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
29 | rs565744609 | chr8:35358873-35358874 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
30 | rs534400757 | chr8:35358913-35358914 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
31 | rs553221531 | chr8:35359003-35359004 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
32 | rs145525695 | chr8:35359018-35359019 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
33 | rs542002509 | chr8:35359069-35359070 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
34 | rs557060629 | chr8:35359103-35359104 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
35 | rs575641265 | chr8:35359138-35359139 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
36 | rs546238732 | chr8:35359228-35359229 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
37 | rs372816775 | chr8:35359254-35359255 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
38 | rs181962953 | chr8:35359369-35359370 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
39 | rs369829070 | chr8:35359418-35359419 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
40 | rs373247461 | chr8:35359419-35359420 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
41 | rs528460425 | chr8:35359531-35359532 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
42 | rs574147372 | chr8:35359554-35359555 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
43 | rs541354863 | chr8:35359557-35359558 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
44 | rs559672336 | chr8:35359600-35359601 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
45 | rs76836997 | chr8:35359601-35359602 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
46 | rs541203561 | chr8:35359603-35359604 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
47 | rs184593533 | chr8:35359614-35359615 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
48 | rs569769762 | chr8:35359670-35359671 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
49 | rs140881997 | chr8:35359673-35359674 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
50 | rs189914447 | chr8:35359752-35359753 | Weak transcription Enhancers | n/a | n/a | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Salivary gland tumor | 18059337 | CNVD |
Breast cancer | 17133270 | CNVD |
High-grade prostatic intraepithelial neoplasia | 16573809 | CNVD |
Prostate cancer | 16573809 | CNVD |
Melanoma | 18172304 | CNVD |
Medulloblastoma | 21979893 | CNVD |
Chronic lymphocytic leukemia | 18922857 | CNVD |
Breast cancer | 17393978 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Cancer | 21637783 | CNVD |
Breast cancer | 20837533 | CNVD |
Squamous cell cancer | 21044232 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
Cancer | 22429812 | CNVD |
Non-small cell lung cancer | 21044232 | CNVD |
Non-syndromic sensorineural hearing loss | 18471307 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Colorectal cancer | 20709793 | CNVD |
Ewing''s sarcoma | 21437220 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Basal cell lymphoma | 21115979 | CNVD |
Breast cancer | 21264507 | CNVD |
Carcinoma ex pleomorphic adenoma | 18828159 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Glioblastoma multiforme | 19960244 | CNVD |
Hepatocellular carcinoma | 22174799 | CNVD |
Oral cancer | 21386901 | CNVD |
Prostate cancer | 21088497 | CNVD |
Prostate cancer | 21965145 | CNVD |
Breast cancer | 20940404 | CNVD |
Colorectal cancer | 19359472 | CNVD |
Embryonal rhabdomyosarcoma | 16790082 | CNVD |
Gastric cancer | 17167181 | CNVD |
Prostate cancer | 16705090 | CNVD |
8p-syndrome | 17576883 | CNVD |
Colorectal cancer | 16272173 | CNVD |
Human rectal carcinomas | 16397240 | CNVD |
Medulloblastoma | 16968546 | CNVD |
Lung adenocarcinoma | 19525976 | CNVD |
Lung cancer | 19525976 | CNVD |
Prostate cancer | 17245344 | CNVD |
Gastrointestinal stromal cancer | 16982739 | CNVD |
Cancer | 16751803 | CNVD |
Wilms tumour | 21544195 | CNVD |
Gastric cancer | 17908304 | CNVD |
Autism | 19415332 | CNVD |
Malaria | 21533027 | CNVD |
Non-syndromic sensorineural hearing loss | 22037309 | CNVD |
Esophageal cancer | 21851588 | CNVD |
Acute promyelocytic leukemia | 19109227 | CNVD |
Breast cancer | 21245420 | CNVD |
Acute lymphoblastic leukemia | 21248843 | CNVD |
Breast cancer | 21785460 | CNVD |
Thoracic aortic aneurysm | 21092924 | CNVD |
Acute myeloid leukemia | 20729466 | CNVD |
Breast cancer | 21509527 | CNVD |
Acute myeloid leukemia | 21251322 | CNVD |
Prostate cancer | 18632612 | CNVD |
Breast cancer | 21858162 | CNVD |
lymphocytic leukemia | 21291569 | CNVD |
Liver carcinoma | 19366792 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
Seminomas | 18059402 | CNVD |
Lung cancer | 18438408 | CNVD |
Gastrointestinal stromal cancer | 19259404 | CNVD |
Malignant peripheral nerve sheath tumor | 18522746 | CNVD |
Myxofibrosarcoma | 16751306 | CNVD |
Immune disease | 21572526 | CNVD |
Non-small cell lung cancer | 21829676 | CNVD |
Ovarian neoplasms | 16753589 | CNVD |
Kallmann Syndrome 2 | 22470819 | CNVD |
Autism | 22495311 | CNVD |
Acute lymphoblastic leukemia | 21390130 | CNVD |
Endometrioid adenocarcinoma | 16974079 | CNVD |
Pancreatic cancer | 21811587 | CNVD |
Multiple myeloma | 16461302 | CNVD |
Developmental delay | 21373258 | CNVD |
Thyroid cancer | 19087340 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Breast cancer | 17603634 | CNVD |
Pancreatic endocrine tumor | 17639061 | CNVD |
Multiple myeloma | 16616336 | CNVD |
Melanoma | 20688739 | CNVD |
Disorders of sex development | 21048976 | CNVD |
Testicular cancer | 18059402 | CNVD |
Breast cancer | 21806811 | CNVD |
Acute lymphoblastic leukemia | 21339820 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Acute lymphoblastic leukemia | 22237106 | CNVD |
Hepatocellular carcinoma | 16750200 | CNVD |
Bladder cancer | 19088036 | CNVD |
Urothelial carcinoma | 21177765 | CNVD |
Breast cancer | 20459607 | CNVD |
Renal cell carcinoma | 18765545 | CNVD |
Colorectal cancer | 16912164 | CNVD |
Neuroticism | 17667963 | CNVD |
Non-muscle invasive bladder neoplasm | 19445696 | CNVD |
Breast cancer | 17001308 | CNVD |
Breast cancer | 17157792 | CNVD |
Cancer | 17001308 | CNVD |
Cancer | 18840272 | CNVD |
head and neck squamous cell carcinoma | 17671120 | CNVD |
Chordoma | 18071362 | CNVD |
Urothelial carcinoma | 18382360 | CNVD |
Ductal carcinoma | 18381933 | CNVD |
Breast cancer | 21328542 | CNVD |
Squamous cell cancer | 20885788 | CNVD |
Hirschsprung''s Disease | 21712996 | CNVD |
Cutaneous T-cell lymphoma | 21881587 | CNVD |
Intellectual disability | 22045946 | CNVD |
Lung cancer | 17925434 | CNVD |
Uveal melanoma | 20484589 | CNVD |
Breast cancer | 16608533 | CNVD |
Breast cancer | 21364760 | CNVD |
Ewing''s sarcoma | 17952124 | CNVD |
Cancer | 20164919 | CNVD |
Breast cancer | 22522925 | CNVD |
Pancreatic cancer | 17952125 | CNVD |
Non-syndromic sensorineural hearing loss | 18451855 | CNVD |
Non-syndromic sensorineural hearing loss | 21293372 | CNVD |
Non-syndromic sensorineural hearing loss | 19587683 | CNVD |
Renal cell carcinoma | 21215367 | CNVD |
Chordoma | 21215367 | CNVD |
Acute myeloid leukemia | 19651600 | CNVD |
early-passage human iPS cells | 21368824 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr8:35356400-35391200 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
2 | chr8:35356800-35358400 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
3 | chr8:35356800-35358800 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
4 | chr8:35357000-35358200 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
5 | chr8:35357000-35358200 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
6 | chr8:35357000-35358400 | Weak transcription | H1 Cell Line | embryonic stem cell |
7 | chr8:35357000-35358400 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
8 | chr8:35357600-35358200 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
9 | chr8:35358200-35359200 | Enhancers | ES-UCSF4 Cell Line | embryonic stem cell |
10 | chr8:35358200-35359600 | Enhancers | iPS-15b Cell Line | embryonic stem cell |
11 | chr8:35358200-35359800 | Enhancers | iPS-18 Cell Line | embryonic stem cell |
12 | chr8:35358400-35359200 | Enhancers | iPS-20b Cell Line | embryonic stem cell |
13 | chr8:35358400-35359800 | Enhancers | H1 Cell Line | embryonic stem cell |
14 | chr8:35358400-35359800 | Enhancers | HUES48 Cell Line | embryonic stem cell |
15 | chr8:35358800-35359600 | Enhancers | HUES64 Cell Line | embryonic stem cell |
16 | chr8:35359200-35359600 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
17 | chr8:35359200-35371600 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
18 | chr8:35359600-35359800 | Enhancers | ES-UCSF4 Cell Line | embryonic stem cell |
19 | chr8:35359800-35361600 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
20 | chr8:35359800-35361600 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
21 | chr8:35359800-35397200 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
22 | chr8:35361600-35362000 | Enhancers | HUES6 Cell Line | embryonic stem cell |
23 | chr8:35361600-35362000 | Enhancers | iPS-18 Cell Line | embryonic stem cell |
24 | chr8:35361600-35362200 | Enhancers | HUES48 Cell Line | embryonic stem cell |
25 | chr8:35361600-35366000 | Weak transcription | Fetal Brain Female | brain |
26 | chr8:35361800-35362000 | Enhancers | H1 Cell Line | embryonic stem cell |
27 | chr8:35361800-35362400 | Enhancers | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
28 | chr8:35361800-35362600 | Enhancers | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
29 | chr8:35361800-35362600 | Enhancers | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
30 | chr8:35362400-35368000 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
31 | chr8:35362600-35363000 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
32 | chr8:35362600-35364000 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
33 | chr8:35363000-35363200 | Enhancers | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
34 | chr8:35363000-35363600 | Enhancers | Fetal Lung | lung |
35 | chr8:35363200-35365600 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
36 | chr8:35364000-35364200 | Enhancers | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
37 | chr8:35365400-35366800 | Enhancers | Cortex derived primary cultured neurospheres | brain |
38 | chr8:35365600-35366200 | Enhancers | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
39 | chr8:35365600-35366400 | Enhancers | Ganglion Eminence derived primary cultured neurospheres | brain |
40 | chr8:35366000-35366200 | Enhancers | Fetal Brain Male | brain |
41 | chr8:35366000-35366400 | Enhancers | Fetal Brain Female | brain |
42 | chr8:35366000-35366800 | Enhancers | Fetal Heart | heart |
43 | chr8:35366000-35366800 | Enhancers | Fetal Muscle Leg | muscle |
44 | chr8:35366200-35366800 | Weak transcription | Fetal Brain Male | brain |
45 | chr8:35366400-35368000 | Weak transcription | Fetal Brain Female | brain |
46 | chr8:35366800-35367000 | Enhancers | Fetal Brain Male | brain |
47 | chr8:35366800-35371600 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
48 | chr8:35366800-35371600 | Weak transcription | Fetal Muscle Leg | muscle |
49 | chr8:35367000-35371200 | Weak transcription | Fetal Brain Male | brain |
50 | chr8:35368000-35368200 | Enhancers | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |