Variant report

Variant nsv533455
Chromosome Location chr13:90041897-90255725
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:268 , 50 per page) page: 1 2 3 4 5 6
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:90045400-90045600 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
2 chr13:90045400-90045800 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr13:90045600-90046000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
4 chr13:90045800-90046600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
5 chr13:90046000-90046200 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
6 chr13:90046000-90046600 Enhancers HUES64 Cell Line embryonic stem cell
7 chr13:90046000-90046600 Enhancers iPS-18 Cell Line embryonic stem cell
8 chr13:90046000-90046600 Enhancers Cortex derived primary cultured neurospheres brain
9 chr13:90046200-90046600 Enhancers H1 Cell Line embryonic stem cell
10 chr13:90046200-90046600 Enhancers HUES48 Cell Line embryonic stem cell
11 chr13:90046200-90047600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
12 chr13:90046600-90052800 Weak transcription H1 Cell Line embryonic stem cell
13 chr13:90049200-90052800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr13:90052800-90053000 Enhancers H1 Cell Line embryonic stem cell
15 chr13:90052800-90053000 Enhancers Fetal Brain Male brain
16 chr13:90052800-90053000 Enhancers Gastric stomach
17 chr13:90052800-90053200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
18 chr13:90052800-90053200 Enhancers Muscle Satellite Cultured Cells --
19 chr13:90052800-90053400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
20 chr13:90052800-90053400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
21 chr13:90052800-90054000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr13:90052800-90054000 Enhancers Primary hematopoietic stem cells blood
23 chr13:90052800-90054200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr13:90052800-90054200 Enhancers Primary monocytes fromperipheralblood blood
25 chr13:90052800-90054200 Enhancers Primary hematopoietic stem cells short term culture blood
26 chr13:90052800-90054200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr13:90052800-90054600 Enhancers Hela-S3 cervix
28 chr13:90053000-90053600 Weak transcription Fetal Brain Male brain
29 chr13:90053000-90053800 Weak transcription Gastric stomach
30 chr13:90053000-90054200 Enhancers NHEK skin
31 chr13:90053000-90059200 Weak transcription H1 Cell Line embryonic stem cell
32 chr13:90053200-90053400 Enhancers A549 lung
33 chr13:90053200-90053400 Enhancers Monocytes-CD14+_RO01746 blood
34 chr13:90053200-90053600 Enhancers Adipose Nuclei Adipose
35 chr13:90053200-90054000 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
36 chr13:90053200-90054000 Flanking Active TSS Muscle Satellite Cultured Cells --
37 chr13:90053400-90053600 Enhancers Liver Liver
38 chr13:90053400-90053800 Enhancers iPS-20b Cell Line embryonic stem cell
39 chr13:90053400-90053800 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr13:90053400-90053800 Flanking Active TSS A549 lung
41 chr13:90053400-90054000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
42 chr13:90053400-90054000 Enhancers Duodenum Smooth Muscle Duodenum
43 chr13:90053400-90054000 Enhancers HUVEC blood vessel
44 chr13:90053400-90054000 Flanking Active TSS Monocytes-CD14+_RO01746 blood
45 chr13:90053600-90054000 Enhancers HUES48 Cell Line embryonic stem cell
46 chr13:90053600-90054000 Enhancers HUES6 Cell Line embryonic stem cell
47 chr13:90053600-90054000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr13:90053600-90054000 Flanking Active TSS Adipose Nuclei Adipose
49 chr13:90053600-90054000 Flanking Active TSS Liver Liver
50 chr13:90053600-90054000 Enhancers Fetal Brain Male brain

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