Variant report

Variant nsv533666
Chromosome Location chr12:57336297-57374437
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:149 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:57334600-57336400 Enhancers HMEC breast
2 chr12:57335000-57336400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr12:57335000-57336400 Enhancers Primary hematopoietic stem cells short term culture blood
4 chr12:57335000-57336400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
5 chr12:57335000-57336400 Enhancers HSMM muscle
6 chr12:57335000-57337200 Enhancers Liver Liver
7 chr12:57335200-57336400 Enhancers Breast Myoepithelial Primary Cells Breast
8 chr12:57335200-57336400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr12:57335200-57336400 Enhancers Esophagus oesophagus
10 chr12:57335200-57336400 Enhancers Fetal Adrenal Gland Adrenal Gland
11 chr12:57335200-57336400 Enhancers Fetal Intestine Large intestine
12 chr12:57335200-57336400 Enhancers HSMMtube muscle
13 chr12:57335200-57336400 Enhancers K562 blood
14 chr12:57335400-57337200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
15 chr12:57335600-57349200 Weak transcription Stomach Smooth Muscle stomach
16 chr12:57335800-57336400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr12:57335800-57336400 Enhancers GM12878-XiMat blood
18 chr12:57335800-57336400 Enhancers NHEK skin
19 chr12:57336000-57336400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr12:57336000-57336400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
21 chr12:57336000-57336400 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin02 Skin
22 chr12:57336000-57341800 Weak transcription Ovary ovary
23 chr12:57336000-57347400 Weak transcription Skeletal Muscle Female skeletal muscle
24 chr12:57336000-57348400 Weak transcription Brain Angular Gyrus brain
25 chr12:57336200-57336400 Enhancers A549 lung
26 chr12:57336200-57336600 Enhancers HepG2 liver
27 chr12:57336200-57345600 Weak transcription Skeletal Muscle Male skeletal muscle
28 chr12:57336200-57347600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
29 chr12:57336400-57341800 Weak transcription Esophagus oesophagus
30 chr12:57336400-57351000 Weak transcription Breast Myoepithelial Primary Cells Breast
31 chr12:57337200-57342800 Weak transcription Liver Liver
32 chr12:57340600-57347000 Weak transcription Left Ventricle heart
33 chr12:57340800-57345400 Weak transcription Spleen Spleen
34 chr12:57341400-57342400 Enhancers HepG2 liver
35 chr12:57341400-57348400 Weak transcription Brain Hippocampus Middle brain
36 chr12:57341600-57342200 Enhancers K562 blood
37 chr12:57341800-57342000 ZNF genes & repeats Ovary ovary
38 chr12:57341800-57342200 Enhancers Esophagus oesophagus
39 chr12:57342000-57342400 Strong transcription Ovary ovary
40 chr12:57342200-57344000 Weak transcription Esophagus oesophagus
41 chr12:57342400-57343000 Weak transcription Ovary ovary
42 chr12:57342800-57343200 ZNF genes & repeats H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr12:57342800-57346400 Strong transcription Liver Liver
44 chr12:57343000-57343200 Strong transcription Ovary ovary
45 chr12:57343200-57344600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr12:57343200-57345400 Weak transcription Ovary ovary
47 chr12:57343400-57344200 Weak transcription Aorta Aorta
48 chr12:57344000-57344600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
49 chr12:57344200-57346600 Strong transcription Aorta Aorta
50 chr12:57344600-57349200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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