Variant report
Variant | nsv535233 |
---|---|
Chromosome Location | chr1:189092551-189214548 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:556)
- CpG islands (count:61)
- Chromatin interactive region (count:47)
- LncRNA region (count:3)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | ARID3A | chr1:189118670-189118888 | K562 | blood: | n/a | n/a |
2 | ATF1 | chr1:189204451-189204466 | K562 | blood: | n/a | n/a |
3 | ATF1 | chr1:189202401-189202585 | K562 | blood: | n/a | n/a |
4 | ATF1 | chr1:189118704-189119125 | K562 | blood: | n/a | n/a |
5 | BATF | chr1:189206204-189206354 | GM12878 | blood: | n/a | chr1:189206300-189206311 |
6 | BCLAF1 | chr1:189118637-189119186 | K562 | blood: | n/a | n/a |
7 | BHLHE40 | chr1:189118889-189119095 | K562 | blood: | n/a | n/a |
8 | CBX3 | chr1:189118747-189119060 | K562 | blood: | n/a | n/a |
9 | CBX3 | chr1:189094793-189095258 | HCT-116 | colon: | n/a | n/a |
10 | CBX3 | chr1:189118641-189119561 | K562 | blood: | n/a | n/a |
11 | CEBPB | chr1:189166339-189166622 | A549 | lung: | n/a | n/a |
12 | CEBPB | chr1:189181835-189182167 | K562 | blood: | n/a | n/a |
13 | CEBPB | chr1:189175252-189175255 | K562 | blood: | n/a | n/a |
14 | CEBPB | chr1:189166348-189166590 | IMR90 | lung: | n/a | n/a |
15 | CEBPB | chr1:189195940-189196280 | HepG2 | liver: | n/a | chr1:189196099-189196110 |
16 | CEBPB | chr1:189149291-189149572 | A549 | lung: | n/a | chr1:189149525-189149536 chr1:189149432-189149443 |
17 | CEBPB | chr1:189195932-189196282 | K562 | blood: | n/a | chr1:189196099-189196110 |
18 | CEBPB | chr1:189166341-189166619 | HepG2 | liver: | n/a | n/a |
19 | CEBPB | chr1:189195947-189196272 | A549 | lung: | n/a | chr1:189196099-189196110 |
20 | CEBPB | chr1:189184524-189184748 | A549 | lung: | n/a | n/a |
21 | CEBPB | chr1:189184575-189184755 | HepG2 | liver: | n/a | n/a |
22 | CEBPB | chr1:189118636-189118957 | K562 | blood: | n/a | n/a |
23 | CEBPB | chr1:189118695-189119077 | K562 | blood: | n/a | n/a |
24 | CEBPB | chr1:189183608-189183801 | K562 | blood: | n/a | n/a |
25 | CEBPB | chr1:189149375-189149525 | K562 | blood: | n/a | chr1:189149432-189149443 |
26 | CEBPB | chr1:189195970-189196243 | H1-hESC | embryonic stem cell: | n/a | chr1:189196099-189196110 |
27 | CEBPB | chr1:189195939-189196276 | IMR90 | lung: | n/a | chr1:189196099-189196110 |
28 | CEBPB | chr1:189149263-189149576 | HepG2 | liver: | n/a | chr1:189149525-189149536 chr1:189149432-189149443 |
29 | CEBPB | chr1:189149272-189149581 | IMR90 | lung: | n/a | chr1:189149525-189149536 chr1:189149432-189149443 |
30 | CEBPD | chr1:189181740-189182174 | K562 | blood: | n/a | n/a |
31 | CEBPD | chr1:189118669-189119222 | K562 | blood: | n/a | n/a |
32 | CHD2 | chr1:189118857-189119073 | K562 | blood: | n/a | n/a |
33 | CHD2 | chr1:189118851-189119132 | H1-hESC | embryonic stem cell: | n/a | n/a |
34 | CHD2 | chr1:189109985-189110031 | K562 | blood: | n/a | n/a |
35 | CREB1 | chr1:189118777-189119112 | A549 | lung: | n/a | n/a |
36 | CTCF | chr1:189119020-189119170 | HBMEC | blood vessel: | n/a | n/a |
37 | CTCF | chr1:189118940-189119090 | GM12865 | blood: | n/a | n/a |
38 | CTCF | chr1:189190000-189190150 | HCT-116 | colon: | n/a | n/a |
39 | CTCF | chr1:189119040-189119190 | GM12875 | blood: | n/a | n/a |
40 | CTCF | chr1:189189980-189190130 | HPAF | blood vessel: | n/a | n/a |
41 | CTCF | chr1:189190030-189190145 | LNCaP | prostate: | n/a | n/a |
42 | CTCF | chr1:189190042-189190166 | MCF-7 | breast: | n/a | n/a |
43 | CTCF | chr1:189118960-189119110 | HepG2 | liver: | n/a | n/a |
44 | CTCF | chr1:189189980-189190130 | SK-N-SH_RA | brain: | n/a | n/a |
45 | CTCF | chr1:189190040-189190190 | HRPEpiC | eye: | n/a | n/a |
46 | CTCF | chr1:189118871-189119124 | A549 | lung: | n/a | n/a |
47 | CTCF | chr1:189190000-189190150 | HCPEpiC | choroid plexus: | n/a | n/a |
48 | CTCF | chr1:189119020-189119170 | GM12878 | blood: | n/a | n/a |
49 | CTCF | chr1:189190020-189190170 | HCT-116 | colon: | n/a | n/a |
50 | CTCF | chr1:189118799-189119173 | K562 | blood: | n/a | n/a |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr1:189194949-189194999 | Caco-2 | colon: | n/a |
2 | chr1:189194949-189194999 | HNPCEpiC | eye: | n/a |
3 | chr1:189194949-189194999 | HCF | heart: | n/a |
4 | chr1:189194949-189194999 | SK-N-MC | brain: | n/a |
5 | chr1:189194949-189194999 | MCF-7 | breast: | n/a |
6 | chr1:189194949-189194999 | AG04450 | lung: | fetal |
7 | chr1:189194949-189194999 | MCF10A-Er-Src | breast: | n/a |
8 | chr1:189194949-189194999 | GM06990 | blood: | n/a |
9 | chr1:189194949-189194999 | HRPEpiC | eye: | n/a |
10 | chr1:189194949-189194999 | GM19239 | blood: | n/a |
11 | chr1:189194949-189194999 | GM12892 | blood: | n/a |
12 | chr1:189194949-189194999 | HEEpiC | esophagus: | n/a |
13 | chr1:189194949-189194999 | NHBE | bronchial: | n/a |
14 | chr1:189194949-189194999 | U87 | brain: | n/a |
15 | chr1:189194949-189194999 | AG09319 | gingival: | n/a |
16 | chr1:189194949-189194999 | A549 | lung: | n/a |
17 | chr1:189194949-189194999 | HCPEpiC | choroid plexus: | n/a |
18 | chr1:189194949-189194999 | NH-A | brain: | n/a |
19 | chr1:189194949-189194999 | HMEC | breast: | n/a |
20 | chr1:189194949-189194999 | IMR90 | lung: | fetal |
21 | chr1:189194949-189194999 | Hepatocyte | liver: | n/a |
22 | chr1:189194949-189194999 | NB4 | blood: | n/a |
23 | chr1:189194949-189194999 | GM12891 | blood: | n/a |
24 | chr1:189194949-189194999 | HL-60 | blood: | n/a |
25 | chr1:189194949-189194999 | HCT-116 | colon: | n/a |
26 | chr1:189194949-189194999 | HUVEC | blood vessel: | n/a |
27 | chr1:189194949-189194999 | HPAEpiC | pulmonary alveolar: | n/a |
28 | chr1:189194949-189194999 | BJ | skin: | n/a |
29 | chr1:189194949-189194999 | HepG2 | liver: | n/a |
30 | chr1:189194949-189194999 | SKMC | muscle: | n/a |
31 | chr1:189194949-189194999 | RPTEC | kidney: | n/a |
32 | chr1:189194949-189194999 | HRE | kidney: | n/a |
33 | chr1:189194949-189194999 | SK-N-SH | brain: | n/a |
34 | chr1:189194949-189194999 | AG09309 | skin: | n/a |
35 | chr1:189194949-189194999 | HEK293 | kidney: | embryo |
36 | chr1:189194949-189194999 | PANC-1 | pancreas: | n/a |
37 | chr1:189194949-189194999 | ECC-1 | luminal epithelium: | n/a |
38 | chr1:189194949-189194999 | PFSK-1 | brain: | n/a |
39 | chr1:189194949-189194999 | ovcar-3 | ovarian: | n/a |
40 | chr1:189194949-189194999 | NT2-D1 | testis: | n/a |
41 | chr1:189194949-189194999 | HAEpiC | amniotic membrane: | n/a |
42 | chr1:189194949-189194999 | AG04449 | skin: | fetal |
43 | chr1:189194949-189194999 | K562 | blood: | n/a |
44 | chr1:189194949-189194999 | HCM | heart: | n/a |
45 | chr1:189194949-189194999 | AG10803 | skin: | n/a |
46 | chr1:189194949-189194999 | GM12878 | blood: | n/a |
47 | chr1:189194949-189194999 | T-47D | breast: | n/a |
48 | chr1:189194949-189194999 | H1-hESC | embryonic stem cell: | embryo |
49 | chr1:189194949-189194999 | ProgFib | skin: | n/a |
50 | chr1:189194949-189194999 | Hela-S3 | cervix: | n/a |
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No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr1:189170367..189172924-chr1:189189578..189192081,2 | K562 | blood: | |
2 | chr1:189148880..189151522-chr1:189151849..189154466,3 | K562 | blood: | |
3 | chr1:189116028..189120237-chr1:189160506..189163276,3 | K562 | blood: | |
4 | chr1:189117456..189122192-chr1:189126377..189132093,10 | K562 | blood: | |
5 | chr1:188432976..188433772-chr1:189118543..189119245,2 | MCF-7 | breast: | |
6 | chr1:189145733..189147839-chr1:189155751..189158462,2 | K562 | blood: | |
7 | chr1:189118692..189120237-chr1:189161776..189163535,2 | K562 | blood: | |
8 | chr1:188902220..188904596-chr1:189118871..189120838,2 | K562 | blood: | |
9 | chr1:189112586..189116347-chr1:189117211..189120686,6 | K562 | blood: | |
10 | chr1:189112586..189116347-chr1:189117211..189120686,6 | K562 | blood: | |
11 | chr1:189110161..189112248-chr17:56736351..56738349,2 | MCF-7 | breast: | |
12 | chr1:189129002..189131397-chr1:189134322..189136351,2 | K562 | blood: | |
13 | chr1:189118996..189121109-chr1:189287929..189290792,2 | K562 | blood: | |
14 | chr1:189205219..189208075-chr1:189212130..189213812,2 | K562 | blood: | |
15 | chr1:189117472..189119445-chr1:189184383..189186495,2 | K562 | blood: | |
16 | chr1:189167872..189169675-chr1:189171676..189174219,2 | K562 | blood: | |
17 | chr1:189148880..189151522-chr1:189151849..189154466,3 | K562 | blood: | |
18 | chr1:189118758..189120623-chr1:189121928..189123602,2 | MCF-7 | breast: | |
19 | chr1:189116028..189120237-chr1:189160506..189163276,3 | K562 | blood: | |
20 | chr1:189109069..189111895-chr1:189118017..189120459,2 | K562 | blood: | |
21 | chr1:189166300..189168058-chr1:189173903..189175630,2 | MCF-7 | breast: | |
22 | chr1:189119463..189122039-chr1:189394507..189396400,2 | K562 | blood: | |
23 | chr1:189118692..189120237-chr1:189161776..189163535,2 | K562 | blood: | |
24 | chr1:189145733..189147839-chr1:189155751..189158462,2 | K562 | blood: | |
25 | chr1:189117897..189121261-chr1:189121594..189126238,14 | K562 | blood: | |
26 | chr1:189055283..189057511-chr1:189118631..189120197,2 | K562 | blood: | |
27 | chr1:189174928..189177287-chr1:189180109..189182692,2 | K562 | blood: | |
28 | chr1:189205219..189208075-chr1:189212130..189213812,2 | K562 | blood: | |
29 | chr1:189103992..189106373-chr1:189109756..189111271,2 | MCF-7 | breast: | |
30 | chr1:189051136..189054044-chr1:189118022..189120373,2 | K562 | blood: | |
31 | chr1:189118758..189120623-chr1:189121928..189123602,2 | MCF-7 | breast: | |
32 | chr1:189109069..189111895-chr1:189118017..189120459,2 | K562 | blood: | |
33 | chr1:189129002..189131397-chr1:189134322..189136351,2 | K562 | blood: | |
34 | chr1:189170367..189172924-chr1:189189578..189192081,2 | K562 | blood: | |
35 | chr1:189167872..189169675-chr1:189171676..189174219,2 | K562 | blood: | |
36 | chr1:189103992..189106373-chr1:189109756..189111271,2 | MCF-7 | breast: | |
37 | chr1:189189341..189190044-chr1:189398354..189398974,2 | MCF-7 | breast: | |
38 | chr1:189117472..189119445-chr1:189184383..189186495,2 | K562 | blood: | |
39 | chr1:189121464..189123287-chr1:189388904..189390413,2 | K562 | blood: | |
40 | chr1:189174928..189177287-chr1:189180109..189182692,2 | K562 | blood: | |
41 | chr1:188751072..188751772-chr1:189118548..189119200,2 | MCF-7 | breast: | |
42 | chr1:189117897..189121261-chr1:189121594..189126238,14 | K562 | blood: | |
43 | chr1:189166300..189168058-chr1:189173903..189175630,2 | MCF-7 | breast: | |
44 | chr1:189117659..189120234-chr6:30584654..30587422,2 | K562 | blood: | |
45 | chr1:189032912..189034690-chr1:189118689..189120245,2 | K562 | blood: | |
46 | chr1:189117678..189120245-chr1:189847842..189850269,2 | K562 | blood: | |
47 | chr1:189117456..189122192-chr1:189126377..189132093,10 | K562 | blood: |
(count:3 , 50 per page) page:
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No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-PLA2G4A-7 | chr1:189119674-189119918 | NONHSAT008484 |
2 | lnc-PLA2G4A-7 | chr1:189118917-189119007 | XLOC_000502 |
3 | lnc-PLA2G4A-7 | chr1:189119673-189119860 | XLOC_000502 |
No data |
No data |
Variant related genes | Relation type |
---|---|
ENSG00000226196 | TF binding region |
ENSG00000226196 | CpG island |
ENSG00000204568 | chromatin interactions |
ENSG00000202077 | chromatin interactions |
ENSG00000204569 | chromatin interactions |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs141528827 | chr1:189098000-189098001 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
2 | rs143725351 | chr1:189098051-189098052 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
3 | rs193154536 | chr1:189098057-189098058 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
4 | rs547463794 | chr1:189098058-189098059 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
5 | rs201335677 | chr1:189098076-189098077 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
6 | rs552075302 | chr1:189098079-189098080 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
7 | rs571612143 | chr1:189098139-189098140 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
8 | rs537387150 | chr1:189098143-189098144 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
9 | rs59296151 | chr1:189098174-189098175 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
10 | rs556931883 | chr1:189098189-189098190 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
11 | rs1912900 | chr1:189098195-189098196 | Weak transcription | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
12 | rs542736647 | chr1:189098199-189098200 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
13 | rs548530469 | chr1:189098203-189098204 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
14 | rs553447718 | chr1:189098232-189098233 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
15 | rs201898349 | chr1:189098234-189098235 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
16 | rs371521234 | chr1:189098294-189098295 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
17 | rs541222693 | chr1:189098303-189098304 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
18 | rs564331387 | chr1:189098324-189098325 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
19 | rs142946962 | chr1:189098330-189098331 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
20 | rs35600971 | chr1:189098331-189098332 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
21 | rs151062595 | chr1:189098342-189098343 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
22 | rs543787321 | chr1:189098351-189098352 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
23 | rs80289215 | chr1:189098368-189098369 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
24 | rs147486693 | chr1:189098391-189098392 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
25 | rs570457489 | chr1:189098393-189098394 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
26 | rs147411574 | chr1:189098394-189098395 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
27 | rs149033658 | chr1:189098397-189098398 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
28 | rs534572041 | chr1:189098401-189098402 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
29 | rs551569820 | chr1:189098468-189098469 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
30 | rs79404876 | chr1:189098474-189098475 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
31 | rs111813197 | chr1:189098489-189098490 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
32 | rs79626437 | chr1:189098508-189098509 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
33 | rs550894196 | chr1:189098521-189098522 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
34 | rs185196858 | chr1:189098551-189098552 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
35 | rs188908270 | chr1:189098578-189098579 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
36 | rs377079820 | chr1:189098600-189098601 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
37 | rs73057013 | chr1:189098605-189098606 | Weak transcription | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
38 | rs140341641 | chr1:189098624-189098625 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
39 | rs574270559 | chr1:189098638-189098639 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
40 | rs150339724 | chr1:189098664-189098665 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
41 | rs538798768 | chr1:189098667-189098668 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
42 | rs115981897 | chr1:189098675-189098676 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
43 | rs577941432 | chr1:189098690-189098691 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
44 | rs370199015 | chr1:189098692-189098693 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
45 | rs145649064 | chr1:189098696-189098697 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
46 | rs138132728 | chr1:189098707-189098708 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
47 | rs563593607 | chr1:189098732-189098733 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
48 | rs73057015 | chr1:189098795-189098796 | Weak transcription | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
49 | rs1912901 | chr1:189098833-189098834 | Weak transcription | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
50 | rs146085201 | chr1:189098850-189098851 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Breast cancer | 17603634 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
HIV/AIDS | 22032296 | CNVD |
Schizophrenia | 19415332 | CNVD |
Autism | 22495311 | CNVD |
Liposarcoma | 21253554 | CNVD |
Burkitt''s lymphoma | 18698080 | CNVD |
Melanoma | 18172304 | CNVD |
Rett syndrome | 21593744 | CNVD |
Cancer | 20164919 | CNVD |
Medulloblastoma | 21979893 | CNVD |
Acute lymphoblastic leukemia | 17443227 | CNVD |
Wilms tumour | 21544195 | CNVD |
Breast cancer | 17133270 | CNVD |
Carcinoma ex pleomorphic adenoma | 18828159 | CNVD |
Non-small cell lung cancer | 21044232 | CNVD |
Cervical cancer | 21063398 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
Astrocytoma | 17387387 | CNVD |
Breast cancer | 20632083 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Ewing''s sarcoma | 21437220 | CNVD |
Gastrointestinal stromal cancer | 20470368 | CNVD |
Glioblastoma multiforme | 19960244 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Hepatocellular carcinoma | 22174799 | CNVD |
Medulloblastoma | 21292688 | CNVD |
Phyllodes tumor | 17334353 | CNVD |
Breast cancer | 21264507 | CNVD |
Multiple myeloma | 21628407 | CNVD |
Cancer | 16751803 | CNVD |
Prostate cancer | 16705090 | CNVD |
Neuroblastoma | 19435921 | CNVD |
Breast cancer | 17850661 | CNVD |
Breast cancer | 16461572 | CNVD |
Intracranial tumor | 16823260 | CNVD |
Medulloblastoma | 18056178 | CNVD |
Monoclonal gammopathy of undetermined significance | 17077331 | CNVD |
Primary mediastinal b-cell lymphoma | 17728785 | CNVD |
Colorectal cancer | 16272173 | CNVD |
Acute lymphoblastic leukemia | 21098271 | CNVD |
Neuroblastoma | 21899760 | CNVD |
Ovarian neoplasms | 16753589 | CNVD |
Glioblastoma multiforme | 17002787 | CNVD |
Breast cancer | 21858162 | CNVD |
Non-small cell lung cancer | 21385341 | CNVD |
Acute lymphoblastic leukemia | 21980252 | CNVD |
Breast cancer | 16608533 | CNVD |
Ewing''s sarcoma | 22429812 | CNVD |
Acute promyelocytic leukemia | 19109227 | CNVD |
Hepatocellular carcinoma | 18803288 | CNVD |
Basal cell lymphoma | 16317097 | CNVD |
Diffuse large b-cell lymphoma | 16317097 | CNVD |
Breast cancer | 17001317 | CNVD |
Acute myeloid leukemia | 21251322 | CNVD |
Multiple myeloma | 17550852 | CNVD |
Prostate cancer | 18632612 | CNVD |
Acute myeloid leukemia | 20729466 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
Testicular germ cell tumor | 18059402 | CNVD |
Ependymoma | 18628472 | CNVD |
Leukemia | 18628472 | CNVD |
Neuroblastoma | 18923191 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Ewing''s sarcoma | 17952124 | CNVD |
Acute lymphoblastic leukemia | 19100363 | CNVD |
Lung cancer | 18438408 | CNVD |
Breast cancer | 21509527 | CNVD |
Endometrioid adenocarcinoma | 16974079 | CNVD |
Metanephric adenoma | 20802469 | CNVD |
Melanoma | 20688739 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Breast cancer | 21611746 | CNVD |
primary effusion lymphomas | 17116491 | CNVD |
Breast cancer | 17393978 | CNVD |
Hepatocellular carcinoma | 16750200 | CNVD |
Acute lymphoblastic leukemia | 22237106 | CNVD |
Breast cancer | 17899364 | CNVD |
Non-small cell lung cancer | 19010865 | CNVD |
Mental retardation | 17847001 | CNVD |
Basal cell lymphoma | 17170743 | CNVD |
Follicular lymphoma | 17170743 | CNVD |
Trisomy 5 syndrome | 21098271 | CNVD |
Acute lymphoblastic leukemia | 21390130 | CNVD |
Cutaneous T-cell lymphoma | 21881587 | CNVD |
Lung adenocarcinoma | 17086460 | CNVD |
Glioblastoma multiforme | 22286061 | CNVD |
Pancreatic ductal adenocarcinoma | 19077451 | CNVD |
Non-syndromic sensorineural hearing loss | 21293372 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr1:189098000-189102000 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
2 | chr1:189106200-189110600 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
3 | chr1:189110400-189111000 | ZNF genes & repeats | Pancreas | Pancrea |
4 | chr1:189110600-189111000 | Enhancers | H1 Derived Mesenchymal Stem Cells | ES cell derived |
5 | chr1:189111000-189118800 | Weak transcription | Pancreas | Pancrea |
6 | chr1:189115600-189116600 | Enhancers | Brain Germinal Matrix | brain |
7 | chr1:189118400-189120000 | Active TSS | Pancreatic Islets | Pancreatic Islet |
8 | chr1:189118800-189119200 | Active TSS | iPS-15b Cell Line | embryonic stem cell |
9 | chr1:189118800-189119200 | Active TSS | Liver | Liver |
10 | chr1:189118800-189119200 | Active TSS | Gastric | stomach |
11 | chr1:189118800-189119400 | Active TSS | Duodenum Mucosa | Duodenum |
12 | chr1:189118800-189119400 | Active TSS | Fetal Intestine Large | intestine |
13 | chr1:189118800-189119400 | ZNF genes & repeats | Pancreas | Pancrea |
14 | chr1:189118800-189119400 | Active TSS | Rectal Mucosa Donor 29 | rectum |
15 | chr1:189118800-189120200 | Active TSS | A549 | lung |
16 | chr1:189118800-189121800 | Active TSS | K562 | blood |
17 | chr1:189127200-189127600 | Active TSS | K562 | blood |
18 | chr1:189152000-189152400 | Enhancers | Fetal Heart | heart |
19 | chr1:189154000-189154600 | Enhancers | H9 Derived Neuron Cultured Cells | ES cell derived |
20 | chr1:189154000-189154800 | Enhancers | HUES64 Cell Line | embryonic stem cell |
21 | chr1:189154000-189155000 | Enhancers | iPS-18 Cell Line | embryonic stem cell |
22 | chr1:189154200-189154800 | Enhancers | HUES48 Cell Line | embryonic stem cell |
23 | chr1:189154200-189155200 | Enhancers | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
24 | chr1:189154400-189155000 | Enhancers | iPS-15b Cell Line | embryonic stem cell |
25 | chr1:189165000-189165200 | Enhancers | Pancreatic Islets | Pancreatic Islet |
26 | chr1:189165600-189167200 | Enhancers | H9 Derived Neuron Cultured Cells | ES cell derived |
27 | chr1:189174200-189174800 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
28 | chr1:189175000-189175400 | Enhancers | A549 | lung |
29 | chr1:189181800-189182600 | Enhancers | H9 Derived Neuron Cultured Cells | ES cell derived |
30 | chr1:189182000-189182800 | Enhancers | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
31 | chr1:189194000-189194800 | ZNF genes & repeats | ES-UCSF4 Cell Line | embryonic stem cell |
32 | chr1:189194600-189194800 | ZNF genes & repeats | Gastric | stomach |
33 | chr1:189196000-189196400 | Active TSS | Primary T killer memory cells from peripheral blood | blood |