Variant report

Variant nsv535233
Chromosome Location chr1:189092551-189214548
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:33 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:189098000-189102000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr1:189106200-189110600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr1:189110400-189111000 ZNF genes & repeats Pancreas Pancrea
4 chr1:189110600-189111000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr1:189111000-189118800 Weak transcription Pancreas Pancrea
6 chr1:189115600-189116600 Enhancers Brain Germinal Matrix brain
7 chr1:189118400-189120000 Active TSS Pancreatic Islets Pancreatic Islet
8 chr1:189118800-189119200 Active TSS iPS-15b Cell Line embryonic stem cell
9 chr1:189118800-189119200 Active TSS Liver Liver
10 chr1:189118800-189119200 Active TSS Gastric stomach
11 chr1:189118800-189119400 Active TSS Duodenum Mucosa Duodenum
12 chr1:189118800-189119400 Active TSS Fetal Intestine Large intestine
13 chr1:189118800-189119400 ZNF genes & repeats Pancreas Pancrea
14 chr1:189118800-189119400 Active TSS Rectal Mucosa Donor 29 rectum
15 chr1:189118800-189120200 Active TSS A549 lung
16 chr1:189118800-189121800 Active TSS K562 blood
17 chr1:189127200-189127600 Active TSS K562 blood
18 chr1:189152000-189152400 Enhancers Fetal Heart heart
19 chr1:189154000-189154600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
20 chr1:189154000-189154800 Enhancers HUES64 Cell Line embryonic stem cell
21 chr1:189154000-189155000 Enhancers iPS-18 Cell Line embryonic stem cell
22 chr1:189154200-189154800 Enhancers HUES48 Cell Line embryonic stem cell
23 chr1:189154200-189155200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr1:189154400-189155000 Enhancers iPS-15b Cell Line embryonic stem cell
25 chr1:189165000-189165200 Enhancers Pancreatic Islets Pancreatic Islet
26 chr1:189165600-189167200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
27 chr1:189174200-189174800 Enhancers Fetal Adrenal Gland Adrenal Gland
28 chr1:189175000-189175400 Enhancers A549 lung
29 chr1:189181800-189182600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
30 chr1:189182000-189182800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr1:189194000-189194800 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
32 chr1:189194600-189194800 ZNF genes & repeats Gastric stomach
33 chr1:189196000-189196400 Active TSS Primary T killer memory cells from peripheral blood blood

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