Variant report

Variant	nsv535405
Chromosome Location	chr1:246378676-246740427
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:4642)
CpG islands
(count:3847)
Chromatin interactive
region (count:177)
LncRNA
region (count:7)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:4642 , 50 per page) page: 1 2 3 4 5 6 7 ... 93

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr1:246536567-246536576	K562	blood:	n/a	n/a
2	ARID3A	chr1:246591789-246592119	K562	blood:	n/a	n/a
3	ARID3A	chr1:246472537-246472962	K562	blood:	n/a	n/a
4	ARID3A	chr1:246444896-246445377	HepG2	liver:	n/a	n/a
5	ARID3A	chr1:246476713-246476913	K562	blood:	n/a	n/a
6	ARID3A	chr1:246740073-246740316	K562	blood:	n/a	n/a
7	ARID3A	chr1:246739546-246739738	K562	blood:	n/a	n/a
8	ARID3A	chr1:246443886-246444158	K562	blood:	n/a	n/a
9	ARID3A	chr1:246469874-246470465	K562	blood:	n/a	n/a
10	ARID3A	chr1:246378134-246379212	K562	blood:	n/a	n/a
11	ARID3A	chr1:246614088-246614383	HepG2	liver:	n/a	chr1:246614110-246614126
12	ARID3A	chr1:246729043-246729235	HepG2	liver:	n/a	n/a
13	ARID3A	chr1:246383173-246383457	HepG2	liver:	n/a	n/a
14	ARID3A	chr1:246729530-246729980	K562	blood:	n/a	n/a
15	ARID3A	chr1:246614048-246614417	K562	blood:	n/a	chr1:246614110-246614126
16	ARID3A	chr1:246409804-246409947	K562	blood:	n/a	n/a
17	ARID3A	chr1:246732646-246733496	K562	blood:	n/a	n/a
18	ARID3A	chr1:246514223-246514241	K562	blood:	n/a	n/a
19	ARID3A	chr1:246468839-246469426	K562	blood:	n/a	n/a
20	ARID3A	chr1:246729459-246729909	HepG2	liver:	n/a	n/a
21	ARID3A	chr1:246495436-246495765	K562	blood:	n/a	n/a
22	ARID3A	chr1:246730285-246730981	K562	blood:	n/a	n/a
23	ARID3A	chr1:246587912-246588291	K562	blood:	n/a	n/a
24	ARID3A	chr1:246660564-246660991	K562	blood:	n/a	n/a
25	ARID3A	chr1:246670516-246670577	HepG2	liver:	n/a	n/a
26	ARID3A	chr1:246660581-246660971	HepG2	liver:	n/a	n/a
27	ATF1	chr1:246501515-246501774	K562	blood:	n/a	n/a
28	ATF1	chr1:246507966-246508030	K562	blood:	n/a	n/a
29	ATF1	chr1:246514087-246514345	K562	blood:	n/a	n/a
30	ATF1	chr1:246591887-246592268	K562	blood:	n/a	n/a
31	ATF1	chr1:246732872-246733329	K562	blood:	n/a	n/a
32	ATF1	chr1:246445017-246445192	K562	blood:	n/a	n/a
33	ATF1	chr1:246589653-246589853	K562	blood:	n/a	n/a
34	ATF1	chr1:246730636-246730930	K562	blood:	n/a	n/a
35	ATF1	chr1:246469981-246470295	K562	blood:	n/a	n/a
36	ATF1	chr1:246561390-246561724	K562	blood:	n/a	n/a
37	ATF1	chr1:246588435-246588914	K562	blood:	n/a	n/a
38	ATF1	chr1:246495450-246495686	K562	blood:	n/a	n/a
39	ATF2	chr1:246729048-246729793	H1-hESC	embryonic stem cell:	n/a	n/a
40	ATF2	chr1:246493100-246493631	GM12878	blood:	n/a	n/a
41	ATF2	chr1:246501723-246502313	GM12878	blood:	n/a	n/a
42	ATF2	chr1:246729298-246730096	GM12878	blood:	n/a	n/a
43	ATF2	chr1:246598868-246599249	H1-hESC	embryonic stem cell:	n/a	n/a
44	ATF2	chr1:246729219-246729717	H1-hESC	embryonic stem cell:	n/a	n/a
45	ATF2	chr1:246729326-246729950	GM12878	blood:	n/a	n/a
46	ATF2	chr1:246492949-246493723	GM12878	blood:	n/a	n/a
47	ATF3	chr1:246378129-246378678	K562	blood:	n/a	n/a
48	ATF3	chr1:246734658-246735052	K562	blood:	n/a	n/a
49	ATF3	chr1:246729333-246729841	A549	lung:	n/a	n/a
50	ATF3	chr1:246729163-246730103	A549	lung:	n/a	n/a

(count:3847 , 50 per page) page: 1 2 3 4 5 6 7 ... 77

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr1:246684113-246684163	SK-N-SH	brain:	n/a
2	chr1:246729345-246729395	HPAEpiC	pulmonary alveolar:	n/a
3	chr1:246717609-246717659	AG04450	lung:	fetal
4	chr1:246670859-246670909	GM12892	blood:	n/a
5	chr1:246684113-246684163	SK-N-SH	brain:	n/a
6	chr1:246729345-246729395	HPAEpiC	pulmonary alveolar:	n/a
7	chr1:246717609-246717659	AG04450	lung:	fetal
8	chr1:246670859-246670909	GM12892	blood:	n/a
9	chr1:246729669-246729719	Jurkat	blood:	n/a
10	chr1:246580717-246580767	GM06990	blood:	n/a
11	chr1:246728727-246728777	BJ	skin:	n/a
12	chr1:246414840-246414890	Hepatocyte	liver:	n/a
13	chr1:246582035-246582085	NT2-D1	testis:	n/a
14	chr1:246670940-246670990	HCF	heart:	n/a
15	chr1:246728677-246728727	Hela-S3	cervix:	n/a
16	chr1:246670459-246670509	Hela-S3	cervix:	n/a
17	chr1:246670859-246670909	T-47D	breast:	n/a
18	chr1:246582116-246582166	Caco-2	colon:	n/a
19	chr1:246671665-246671715	HEEpiC	esophagus:	n/a
20	chr1:246684329-246684379	A549	lung:	n/a
21	chr1:246729585-246729635	BE2_C	brain:	n/a
22	chr1:246728677-246728727	RPTEC	kidney:	n/a
23	chr1:246733057-246733107	AG09319	gingival:	n/a
24	chr1:246730188-246730238	SK-N-MC	brain:	n/a
25	chr1:246730188-246730238	GM12891	blood:	n/a
26	chr1:246582035-246582085	PANC-1	pancreas:	n/a
27	chr1:246668601-246668651	HRPEpiC	eye:	n/a
28	chr1:246729501-246729551	HMEC	breast:	n/a
29	chr1:246451744-246451794	HRCEpiC	kidney:	n/a
30	chr1:246518671-246518721	HRE	kidney:	n/a
31	chr1:246729218-246729268	H1-hESC	embryonic stem cell:	embryo
32	chr1:246671665-246671715	SKMC	muscle:	n/a
33	chr1:246670459-246670509	A549	lung:	n/a
34	chr1:246729345-246729395	HAEpiC	amniotic membrane:	n/a
35	chr1:246684329-246684379	CMK	blood:	n/a
36	chr1:246669975-246670025	HUVEC	blood vessel:	n/a
37	chr1:246670898-246670948	Hepatocyte	liver:	n/a
38	chr1:246383021-246383071	NB4	blood:	n/a
39	chr1:246729585-246729635	HMEC	breast:	n/a
40	chr1:246668601-246668651	AG10803	skin:	n/a
41	chr1:246729345-246729395	NH-A	brain:	n/a
42	chr1:246729578-246729628	HCF	heart:	n/a
43	chr1:246729585-246729635	AG09319	gingival:	n/a
44	chr1:246670728-246670778	AG09319	gingival:	n/a
45	chr1:246580717-246580767	HEEpiC	esophagus:	n/a
46	chr1:246415555-246415605	SKMC	muscle:	n/a
47	chr1:246580717-246580767	ovcar-3	ovarian:	n/a
48	chr1:246670754-246670804	HCM	heart:	n/a
49	chr1:246670898-246670948	HL-60	blood:	n/a
50	chr1:246466280-246466330	SK-N-SH_RA	brain:	n/a

(count:177 , 50 per page) page: 1 2 3 4

No.	Distal block	Cell Line	Cell type
1	chr1:246618350..246620200-chr1:246622120..246624573,2	K562	blood:
2	chr1:246482242..246483844-chr1:246486769..246488361,2	MCF-7	breast:
3	chr1:246482654..246484211-chr1:246484942..246487391,2	MCF-7	breast:
4	chr1:246703270..246704853-chr1:247491463..247493395,2	K562	blood:
5	chr1:246175314..246176186-chr1:246443613..246444388,3	K562	blood:
6	chr1:246513035..246514840-chr1:246515014..246517355,2	K562	blood:
7	chr1:246463275..246466123-chr1:246471236..246474164,2	MCF-7	breast:
8	chr1:246452108..246454615-chr1:246458116..246460010,2	K562	blood:
9	chr1:246489256..246490981-chr1:246569694..246571729,2	K562	blood:
10	chr1:246660548..246661305-chr1:246859828..246860357,2	K562	blood:
11	chr1:246727699..246730587-chr1:246733873..246736383,3	MCF-7	breast:
12	chr1:246600615..246602867-chr1:246611265..246613184,2	K562	blood:
13	chr1:246685591..246688881-chr1:246727054..246730014,3	K562	blood:
14	chr1:246175654..246176170-chr1:246655570..246656125,2	K562	blood:
15	chr1:246660320..246661257-chr1:246916886..246917830,4	K562	blood:
16	chr1:246432947..246435481-chr1:246440603..246442462,2	MCF-7	breast:
17	chr1:246675941..246677837-chr1:246690243..246691977,2	K562	blood:
18	chr1:246540059..246542497-chr1:246543085..246545736,2	K562	blood:
19	chr1:246482242..246483844-chr1:246486769..246488361,2	MCF-7	breast:
20	chr1:246600615..246602867-chr1:246611265..246613184,2	K562	blood:
21	chr1:246513912..246515911-chr1:246530351..246532425,2	K562	blood:
22	chr1:246680075..246681714-chr1:246684033..246686969,2	K562	blood:
23	chr1:246546236..246548052-chr1:246554234..246556624,2	MCF-7	breast:
24	chr1:246661655..246664160-chr1:246664640..246667505,3	K562	blood:
25	chr1:246497788..246499304-chr1:246499416..246501844,2	MCF-7	breast:
26	chr1:246392871..246395828-chr1:246399439..246401491,2	K562	blood:
27	chr1:246658777..246661380-chr1:246664894..246666631,2	K562	blood:
28	chr1:246601270..246602898-chr1:246608886..246610495,2	K562	blood:
29	chr1:246280440..246281134-chr1:246613800..246614445,2	MCF-7	breast:
30	chr1:246692831..246695438-chr1:246704915..246707883,3	K562	blood:
31	chr1:246471340..246473899-chr1:246474297..246475919,2	K562	blood:
32	chr1:246392871..246395828-chr1:246399439..246401491,2	K562	blood:
33	chr1:246478448..246480701-chr1:246489976..246492079,2	MCF-7	breast:
34	chr1:246693616..246696084-chr1:246696950..246700656,3	K562	blood:
35	chr1:245319905..245320442-chr1:246655652..246656156,2	K562	blood:
36	chr1:246480625..246484494-chr1:246484509..246487913,3	K562	blood:
37	chr1:246711666..246713604-chr1:246728356..246731058,3	K562	blood:
38	chr1:246175508..246176198-chr1:246613763..246614605,2	K562	blood:
39	chr1:246601398..246602968-chr1:246608645..246610386,2	K562	blood:
40	chr1:246729017..246731987-chr1:246738180..246742192,5	MCF-7	breast:
41	chr1:246389393..246391368-chr1:246392967..246395959,3	K562	blood:
42	chr1:246668302..246670787-chr1:246727323..246729930,4	MCF-7	breast:
43	chr1:246643346..246644875-chr1:246651223..246652948,2	K562	blood:
44	chr1:246513912..246515911-chr1:246530351..246532425,2	K562	blood:
45	chr1:246446720..246449077-chr1:246451672..246454637,2	K562	blood:
46	chr1:246670144..246671144-chr11:9335985..9336628,2	HCT-116	colon:
47	chr1:246660152..246661220-chr1:246692463..246693268,3	MCF-7	breast:
48	chr1:246672116..246673896-chr1:246728925..246730470,2	MCF-7	breast:
49	chr1:246548799..246550495-chr1:246559308..246561111,2	K562	blood:
50	chr1:246478448..246480701-chr1:246489976..246492079,2	MCF-7	breast:

(count:7 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-SMYD3-4	chr1:246714169-246714819	NONHSAT010710
2	lnc-CNST-2	chr1:246690332-246690503	NONHSAT010708
3	lnc-TFB2M-3	chr1:246691864-246692143	NONHSAT010709
4	lnc-TFB2M-2	chr1:246484965-246485170	ENSG00000230184.1
5	lnc-CNST-2	chr1:246691213-246691457	NONHSAT010708
6	lnc-SMYD3-4	chr1:246715093-246715408	NONHSAT010710
7	lnc-TFB2M-2	chr1:246485586-246485740	ENSG00000230184.1

No data

Variant related genes	Relation type
CNST	TF binding region
ENSG00000227728	TF binding region
TFB2M	TF binding region
ENSG00000229112	TF binding region
SMYD3	TF binding region
ENSG00000242042	TF binding region
SMYD3-IT1	TF binding region
ENSG00000230813	TF binding region
ENSG00000207326	TF binding region
CNST	CpG island
ENSG00000227728	CpG island
TFB2M	CpG island
ENSG00000229112	CpG island
SMYD3	CpG island
ENSG00000242042	CpG island
SMYD3-IT1	CpG island
ENSG00000230813	CpG island
ENSG00000207326	CpG island
ENSG00000260924	chromatin interactions
ENSG00000225300	chromatin interactions
ENSG00000162851	chromatin interactions
ENSG00000166471	chromatin interactions
ENSG00000230184	chromatin interactions
ENSG00000162714	chromatin interactions
ENSG00000229112	chromatin interactions
ENSG00000162852	chromatin interactions
ENSG00000040487	chromatin interactions
ENSG00000185420	chromatin interactions
ENSG00000207326	chromatin interactions
ENSG00000242042	chromatin interactions
ENSG00000170345	chromatin interactions
ENSG00000082996	chromatin interactions
ENSG00000230813	chromatin interactions
ENSG00000227728	chromatin interactions

Extended variants
information (count: 15215 )
Associated
traits (count: 91 )

Variant overlapped rSNPs/rCNVs (count:15215 , 50 per page) page: 1 2 3 4 5 6 7 ... 305

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs374476136	chr1:246378680-246378681	Weak transcription Enhancers Active TSS Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
2	rs549813965	chr1:246378728-246378729	Weak transcription Enhancers Active TSS Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
3	rs569374610	chr1:246378729-246378730	Weak transcription Enhancers Active TSS Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs538078391	chr1:246378730-246378731	Weak transcription Enhancers Active TSS Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs548357616	chr1:246378731-246378732	Weak transcription Enhancers Active TSS Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
6	rs5021681	chr1:246378808-246378809	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
7	rs565546143	chr1:246378824-246378825	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs369037277	chr1:246378832-246378833	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
9	rs544331011	chr1:246378836-246378837	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
10	rs183679471	chr1:246378853-246378854	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
11	rs5021682	chr1:246378897-246378898	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
12	rs5021683	chr1:246378908-246378909	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
13	rs10924558	chr1:246378939-246378940	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
14	rs560391963	chr1:246378962-246378963	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
15	rs2878077	chr1:246378981-246378982	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
16	rs10924559	chr1:246378993-246378994	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
17	rs116146431	chr1:246379001-246379002	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs189228166	chr1:246379010-246379011	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs1892211	chr1:246379011-246379012	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
20	rs563942098	chr1:246379029-246379030	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs1892212	chr1:246379043-246379044	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
22	rs551176849	chr1:246379058-246379059	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs5021684	chr1:246379080-246379081	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
24	rs192396474	chr1:246379107-246379108	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs5021685	chr1:246379118-246379119	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
26	rs548421302	chr1:246379119-246379120	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs374476559	chr1:246379150-246379151	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs553772578	chr1:246379212-246379213	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs568268022	chr1:246379219-246379220	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs200648470	chr1:246379220-246379221	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs527984295	chr1:246379256-246379257	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs146207797	chr1:246379257-246379258	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs570778026	chr1:246379264-246379265	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs539847365	chr1:246379267-246379268	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs556276515	chr1:246379268-246379269	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs1892213	chr1:246379334-246379335	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
37	rs535907122	chr1:246379419-246379420	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs139121116	chr1:246379449-246379450	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs7418754	chr1:246379460-246379461	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
40	rs540989133	chr1:246379503-246379504	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs201323518	chr1:246379511-246379512	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs536326596	chr1:246379513-246379514	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs373755413	chr1:246379514-246379515	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs10924560	chr1:246379538-246379539	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
45	rs562939712	chr1:246379546-246379547	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs574406280	chr1:246379573-246379574	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs10924561	chr1:246379604-246379605	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
48	rs533479788	chr1:246379664-246379665	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs10802353	chr1:246379680-246379681	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
50	rs561958070	chr1:246379718-246379719	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:91)

Disease	PMID	Source
Esophageal squamous carcinoma	21637470	CNVD
HIV/AIDS	22032296	CNVD
Schizophrenia	19415332	CNVD
Melanoma	18172304	CNVD
Rett syndrome	21593744	CNVD
Medulloblastoma	21979893	CNVD
Wilms tumour	21544195	CNVD
Breast cancer	17133270	CNVD
Non-small cell lung cancer	21044232	CNVD
Cervical cancer	21063398	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	20632083	CNVD
Endometrial cancer	22040021	CNVD
Ewing''s sarcoma	21437220	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	21080181	CNVD
Hepatocellular carcinoma	22174799	CNVD
Medulloblastoma	21292688	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	21264507	CNVD
Liposarcoma	21253554	CNVD
Multiple myeloma	21628407	CNVD
Cancer	16751803	CNVD
Prostate cancer	16705090	CNVD
Neuroblastoma	19435921	CNVD
Breast cancer	17850661	CNVD
Breast cancer	16461572	CNVD
Intracranial tumor	16823260	CNVD
Medulloblastoma	18056178	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Colorectal cancer	16272173	CNVD
Neuroblastoma	21899760	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Breast cancer	16608533	CNVD
Ewing''s sarcoma	22429812	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	17001317	CNVD
Acute myeloid leukemia	20729466	CNVD
Testicular germ cell tumor	18059402	CNVD
Neuroblastoma	18923191	CNVD
Acute lymphoblastic leukemia	19100363	CNVD
Breast cancer	21509527	CNVD
Urothelial carcinoma	21177765	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Hepatocellular carcinoma	18803288	CNVD
Urothelial tumor	18831757	CNVD
Lung cancer	18438408	CNVD
Medulloblastoma	16783165	CNVD
Basal cell lymphoma	17170743	CNVD
Basal cell lymphoma	17053054	CNVD
Congenital abnormalities	21549014	CNVD
Developmental delay	21549014	CNVD
Mental retardation	21549014	CNVD
small cell lung cancer	20016488	CNVD
Cancer	20164920	CNVD
Cancer	17060936	CNVD
abnormal development	18461090	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Non-small cell lung cancer	21829676	CNVD
Multiple myeloma	16616336	CNVD
Ovarian cancer	21720365	CNVD
Glioblastoma multiforme	22291905	CNVD
Myelofibrosis	22110671	CNVD
Disease	21936942	CNVD
laryngomalacia	21936942	CNVD
GLUT3 deficiency syndrome	20509907	CNVD
Developmental delay	21373258	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
Developmental delay	19490664	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Cutaneous malignant melanoma	18794153	CNVD
Astrocytoma	17934521	CNVD
Neurocytoma	17123091	CNVD
Central neurocytomas	17123091	CNVD
Breast cancer	20409316	CNVD
Fibroblasts	17951408	CNVD
Lung cancer	17951408	CNVD
Schizophrenia	20967226	CNVD
Bipolar disorder	19114987	CNVD
Schizophrenia	19805367	CNVD
Cancer	20164919	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	19036926	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Oral cancer	21386901	CNVD

Chromatin state (count:4212 , 50 per page) page: 1 2 3 4 5 6 7 ... 85

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:246340200-246384600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr1:246369200-246384000	Weak transcription	Aorta	Aorta
3	chr1:246374200-246382800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
4	chr1:246374400-246382400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
5	chr1:246374400-246384400	Weak transcription	Pancreas	Pancrea
6	chr1:246375800-246383400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
7	chr1:246376000-246381800	Enhancers	Primary hematopoietic stem cells short term culture	blood
8	chr1:246376000-246382000	Weak transcription	NHLF	lung
9	chr1:246376200-246380600	Enhancers	Primary monocytes fromperipheralblood	blood
10	chr1:246376800-246379600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
11	chr1:246377400-246378800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
12	chr1:246377400-246379000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
13	chr1:246377400-246379200	Enhancers	HSMMtube	muscle
14	chr1:246377400-246379200	Enhancers	Osteobl	bone
15	chr1:246377400-246382000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
16	chr1:246377600-246378800	Enhancers	Placenta Amnion	Placenta Amnion
17	chr1:246377600-246379200	Enhancers	NHDF-Ad	bronchial
18	chr1:246377600-246382200	Weak transcription	HepG2	liver
19	chr1:246377800-246379000	Enhancers	Muscle Satellite Cultured Cells	--
20	chr1:246377800-246379200	Enhancers	HSMM	muscle
21	chr1:246378000-246379000	Enhancers	Primary hematopoietic stem cells	blood
22	chr1:246378000-246379000	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
23	chr1:246378200-246379000	Enhancers	Primary B cells from peripheral blood	blood
24	chr1:246378200-246379400	Enhancers	GM12878-XiMat	blood
25	chr1:246378400-246378800	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
26	chr1:246378400-246379200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
27	chr1:246378400-246379200	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
28	chr1:246378600-246378800	Flanking Active TSS	NH-A	brain
29	chr1:246378600-246379200	Enhancers	Primary B cells from cord blood	blood
30	chr1:246378600-246379200	Enhancers	HUVEC	blood vessel
31	chr1:246378600-246379200	Flanking Active TSS	K562	blood
32	chr1:246378600-246379400	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
33	chr1:246378800-246379000	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
34	chr1:246378800-246379000	Flanking Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
35	chr1:246378800-246379200	Enhancers	Fetal Stomach	stomach
36	chr1:246378800-246379200	Enhancers	NH-A	brain
37	chr1:246379000-246379400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
38	chr1:246379000-246380000	Weak transcription	Primary hematopoietic stem cells	blood
39	chr1:246379000-246382400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
40	chr1:246379000-246383400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
41	chr1:246379000-246384400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
42	chr1:246379200-246380800	Enhancers	K562	blood
43	chr1:246379200-246382000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
44	chr1:246379200-246382200	Weak transcription	Primary B cells from cord blood	blood
45	chr1:246379200-246382400	Weak transcription	NHDF-Ad	bronchial
46	chr1:246379200-246382600	Weak transcription	NH-A	brain
47	chr1:246379200-246382600	Weak transcription	Osteobl	bone
48	chr1:246379200-246383000	Weak transcription	Fetal Stomach	stomach
49	chr1:246379200-246383200	Enhancers	Primary neutrophils fromperipheralblood	blood
50	chr1:246379200-246385400	Weak transcription	HUVEC	blood vessel

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