Variant report

Variant	nsv535635
Chromosome Location	chr2:35346540-35535329
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:515)
CpG islands
(count:61)
Chromatin interactive
region (count:25)
LncRNA
region (count:39)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:515 , 50 per page) page: 1 2 3 4 5 6 7 ... 11

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF1	chr2:35494699-35494878	K562	blood:	n/a	n/a
2	BCL11A	chr2:35401795-35402176	H1-hESC	embryonic stem cell:	n/a	n/a
3	BRCA1	chr2:35399964-35400197	Hela-S3	cervix:	n/a	n/a
4	CEBPB	chr2:35381648-35381980	Hela-S3	cervix:	n/a	n/a
5	CEBPB	chr2:35513131-35513454	HepG2	liver:	n/a	n/a
6	CEBPB	chr2:35354834-35355117	A549	lung:	n/a	n/a
7	CEBPB	chr2:35392695-35392991	HepG2	liver:	n/a	chr2:35392847-35392858
8	CEBPB	chr2:35409258-35409544	HepG2	liver:	n/a	chr2:35409368-35409379
9	CEBPB	chr2:35445413-35446047	Hela-S3	cervix:	n/a	n/a
10	CEBPB	chr2:35451298-35451471	HepG2	liver:	n/a	chr2:35451382-35451393
11	CEBPB	chr2:35354790-35355067	IMR90	lung:	n/a	n/a
12	CEBPB	chr2:35522459-35522928	MCF-7	breast:	n/a	n/a
13	CEBPB	chr2:35423649-35423835	HepG2	liver:	n/a	chr2:35423727-35423738
14	CEBPB	chr2:35443522-35443545	HepG2	liver:	n/a	n/a
15	CEBPB	chr2:35445293-35445486	HepG2	liver:	n/a	chr2:35445377-35445388
16	CEBPB	chr2:35350260-35350409	HepG2	liver:	n/a	n/a
17	CEBPB	chr2:35367584-35367813	A549	lung:	n/a	n/a
18	CEBPB	chr2:35376002-35376339	Hela-S3	cervix:	n/a	n/a
19	CEBPB	chr2:35417029-35417229	A549	lung:	n/a	chr2:35417173-35417184
20	CEBPB	chr2:35523567-35524007	MCF-7	breast:	n/a	n/a
21	CEBPB	chr2:35392691-35392950	A549	lung:	n/a	chr2:35392847-35392858
22	CEBPB	chr2:35375163-35375530	Hela-S3	cervix:	n/a	n/a
23	CEBPB	chr2:35375309-35375511	HepG2	liver:	n/a	n/a
24	CEBPB	chr2:35417018-35417324	HepG2	liver:	n/a	chr2:35417173-35417184
25	CEBPB	chr2:35445796-35446016	A549	lung:	n/a	n/a
26	CEBPB	chr2:35522431-35522932	MCF-7	breast:	n/a	n/a
27	CHD2	chr2:35399982-35400231	Hela-S3	cervix:	n/a	n/a
28	CHD2	chr2:35453824-35453831	H1-hESC	embryonic stem cell:	n/a	n/a
29	CTCF	chr2:35393579-35393677	GM12878	blood:	n/a	chr2:35393622-35393640 chr2:35393624-35393645
30	CTCF	chr2:35393432-35393732	MCF-7	breast:	n/a	chr2:35393622-35393640 chr2:35393624-35393645
31	CTCF	chr2:35393573-35393664	Kidney_OC	kidney:	n/a	chr2:35393622-35393640 chr2:35393624-35393645
32	CTCF	chr2:35424480-35424630	SK-N-SH_RA	brain:	n/a	n/a
33	CTCF	chr2:35424509-35424620	Hela-S3	cervix:	n/a	n/a
34	CTCF	chr2:35424440-35424590	BE2_C	brain:	n/a	n/a
35	CTCF	chr2:35505168-35505188	GM20000	blood:	n/a	n/a
36	CTCF	chr2:35424500-35424650	BE2_C	brain:	n/a	n/a
37	CTCF	chr2:35424480-35424630	WERI-Rb-1	eye:	n/a	n/a
38	CTCF	chr2:35424420-35424570	NHEK	skin:	n/a	n/a
39	CTCF	chr2:35424460-35424610	HRPEpiC	eye:	n/a	n/a
40	CTCF	chr2:35393540-35393690	Hela-S3	cervix:	n/a	chr2:35393622-35393640 chr2:35393624-35393645
41	CTCF	chr2:35424445-35424633	HepG2	liver:	n/a	n/a
42	CTCF	chr2:35424460-35424610	SK-N-SH_RA	brain:	n/a	n/a
43	CTCF	chr2:35424463-35424655	MCF-7	breast:	n/a	n/a
44	CTCF	chr2:35393600-35393750	MCF-7	breast:	n/a	chr2:35393622-35393640 chr2:35393624-35393645
45	CTCF	chr2:35393566-35393691	HepG2	liver:	n/a	chr2:35393622-35393640 chr2:35393624-35393645
46	CTCF	chr2:35393536-35393708	LNCaP	prostate:	n/a	chr2:35393622-35393640 chr2:35393624-35393645
47	CTCF	chr2:35393524-35393695	A549	lung:	n/a	chr2:35393622-35393640 chr2:35393624-35393645
48	CTCF	chr2:35424426-35424689	MCF-7	breast:	n/a	n/a
49	CTCF	chr2:35424295-35424778	MCF-7	breast:	n/a	n/a
50	CTCF	chr2:35424440-35424590	RPTEC	kidney:	n/a	n/a

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr2:35518097-35518147	NB4	blood:	n/a
2	chr2:35518097-35518147	Hepatocyte	liver:	n/a
3	chr2:35518097-35518147	HEK293	kidney:	embryo
4	chr2:35518097-35518147	AG04450	lung:	fetal
5	chr2:35518097-35518147	K562	blood:	n/a
6	chr2:35518097-35518147	T-47D	breast:	n/a
7	chr2:35518097-35518147	ProgFib	skin:	n/a
8	chr2:35518097-35518147	GM12892	blood:	n/a
9	chr2:35518097-35518147	NHBE	bronchial:	n/a
10	chr2:35518097-35518147	MCF-7	breast:	n/a
11	chr2:35518097-35518147	HPAEpiC	pulmonary alveolar:	n/a
12	chr2:35518097-35518147	HAEpiC	amniotic membrane:	n/a
13	chr2:35518097-35518147	H1-hESC	embryonic stem cell:	embryo
14	chr2:35518097-35518147	A549	lung:	n/a
15	chr2:35518097-35518147	AG09309	skin:	n/a
16	chr2:35518097-35518147	BJ	skin:	n/a
17	chr2:35518097-35518147	MCF10A-Er-Src	breast:	n/a
18	chr2:35518097-35518147	BE2_C	brain:	n/a
19	chr2:35518097-35518147	AG10803	skin:	n/a
20	chr2:35518097-35518147	SK-N-SH_RA	brain:	n/a
21	chr2:35518097-35518147	LNCaP	prostate:	n/a
22	chr2:35518097-35518147	HL-60	blood:	n/a
23	chr2:35518097-35518147	HRCEpiC	kidney:	n/a
24	chr2:35518097-35518147	HepG2	liver:	n/a
25	chr2:35518097-35518147	ovcar-3	ovarian:	n/a
26	chr2:35518097-35518147	GM19239	blood:	n/a
27	chr2:35518097-35518147	SK-N-SH	brain:	n/a
28	chr2:35518097-35518147	HCPEpiC	choroid plexus:	n/a
29	chr2:35518097-35518147	RPTEC	kidney:	n/a
30	chr2:35518097-35518147	AG04449	skin:	fetal
31	chr2:35518097-35518147	GM12891	blood:	n/a
32	chr2:35518097-35518147	HCF	heart:	n/a
33	chr2:35518097-35518147	HNPCEpiC	eye:	n/a
34	chr2:35518097-35518147	SK-N-MC	brain:	n/a
35	chr2:35518097-35518147	HRE	kidney:	n/a
36	chr2:35518097-35518147	Caco-2	colon:	n/a
37	chr2:35518097-35518147	IMR90	lung:	fetal
38	chr2:35518097-35518147	U87	brain:	n/a
39	chr2:35518097-35518147	HRPEpiC	eye:	n/a
40	chr2:35518097-35518147	CMK	blood:	n/a
41	chr2:35518097-35518147	AoSMC	blood vessel:	n/a
42	chr2:35518097-35518147	PANC-1	pancreas:	n/a
43	chr2:35518097-35518147	PrEC	prostate:	n/a
44	chr2:35518097-35518147	HCT-116	colon:	n/a
45	chr2:35518097-35518147	SAEC	small airway:	n/a
46	chr2:35518097-35518147	Hela-S3	cervix:	n/a
47	chr2:35518097-35518147	PFSK-1	brain:	n/a
48	chr2:35518097-35518147	HMEC	breast:	n/a
49	chr2:35518097-35518147	ECC-1	luminal epithelium:	n/a
50	chr2:35518097-35518147	GM06990	blood:	n/a

(count:25 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr2:35342917..35344665-chr2:35344772..35347578,2	MCF-7	breast:
2	chr2:35419204..35420824-chr2:35561387..35563219,2	MCF-7	breast:
3	chr2:35392713..35393658-chr2:35567942..35568821,2	MCF-7	breast:
4	chr2:35494459..35497337-chr2:35509045..35511917,2	MCF-7	breast:
5	chr2:35522554..35524084-chr2:35594104..35596851,2	MCF-7	breast:
6	chr2:35524345..35526725-chr2:35531053..35532688,2	MCF-7	breast:
7	chr2:35393272..35393934-chr2:35653413..35654042,2	MCF-7	breast:
8	chr2:35534253..35536153-chr2:35536523..35538995,2	MCF-7	breast:
9	chr2:35390044..35391720-chr2:35398125..35400924,2	K562	blood:
10	chr2:35359597..35360193-chr6:115017299..115018148,2	MCF-7	breast:
11	chr2:35390044..35391720-chr2:35398125..35400924,2	K562	blood:
12	chr2:35523124..35525670-chr2:35529266..35531418,2	MCF-7	breast:
13	chr2:35494459..35497337-chr2:35509045..35511917,2	MCF-7	breast:
14	chr2:35393157..35394354-chr2:35634679..35636139,8	MCF-7	breast:
15	chr2:35385075..35387812-chr2:35387950..35390253,3	K562	blood:
16	chr2:35385075..35387812-chr2:35387950..35390253,3	K562	blood:
17	chr2:35515834..35519983-chr2:35520328..35526264,11	MCF-7	breast:
18	chr2:35523124..35525670-chr2:35529266..35531418,2	MCF-7	breast:
19	chr2:35508463..35510186-chr2:35510352..35512886,2	K562	blood:
20	chr2:35515834..35519983-chr2:35520328..35526264,11	MCF-7	breast:
21	chr2:35524345..35526725-chr2:35531053..35532688,2	MCF-7	breast:
22	chr2:35393099..35394069-chr2:35567966..35568823,5	MCF-7	breast:
23	chr2:35438569..35439074-chr2:35522272..35523184,2	MCF-7	breast:
24	chr2:35438569..35439074-chr2:35522272..35523184,2	MCF-7	breast:
25	chr2:35508463..35510186-chr2:35510352..35512886,2	K562	blood:

(count:39 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-CRIM1-1	chr2:35384150-35384221	ENSG00000226994.3
2	lnc-CRIM1-1	chr2:35384150-35384221	ENSG00000226994.3
3	lnc-CRIM1-1	chr2:35410303-35410755	ENSG00000226994.3
4	lnc-CRIM1-1	chr2:35389194-35389308	ENSG00000226994.3
5	lnc-CRIM1-1	chr2:35387997-35388125	ENSG00000226994.3
6	lnc-CRIM1-1	chr2:35384150-35384221	ENSG00000226994.3
7	lnc-CRIM1-1	chr2:35387842-35387905	ENSG00000226994.3
8	lnc-CRIM1-1	chr2:35399595-35399715	ENSG00000226994.3
9	lnc-CRIM1-1	chr2:35397858-35398097	ENSG00000226994.3
10	lnc-CRIM1-1	chr2:35384150-35384830	ENSG00000226994.3
11	lnc-CRIM1-1	chr2:35387842-35387905	ENSG00000226994.3
12	lnc-CRIM1-1	chr2:35387842-35387905	ENSG00000226994.3
13	lnc-CRIM1-1	chr2:35387842-35387905	ENSG00000226994.3
14	lnc-CRIM1-1	chr2:35384613-35384694	ENSG00000226994.3
15	lnc-CRIM1-1	chr2:35389194-35389308	ENSG00000226994.3
16	lnc-CRIM1-1	chr2:35387997-35388125	ENSG00000226994.3
17	lnc-CRIM1-1	chr2:35384613-35384694	ENSG00000226994.3
18	lnc-CRIM1-1	chr2:35384150-35384221	ENSG00000226994.3
19	lnc-CRIM1-1	chr2:35387855-35387905	ENSG00000226994.3
20	lnc-CRIM1-1	chr2:35387852-35387905	ENSG00000226994.3
21	lnc-CRIM1-1	chr2:35384665-35384694	ENSG00000226994.3
22	lnc-CRIM1-1	chr2:35384613-35384694	XLOC_001425
23	lnc-CRIM1-1	chr2:35387997-35388125	ENSG00000226994.3
24	lnc-CRIM1-1	chr2:35389194-35389308	ENSG00000226994.3
25	lnc-CRIM1-1	chr2:35387997-35388178	XLOC_001425
26	lnc-CRIM1-1	chr2:35387997-35388125	ENSG00000226994.3
27	lnc-CRIM1-1	chr2:35384613-35385344	ENSG00000226994.3
28	lnc-CRIM1-1	chr2:35397858-35398190	ENSG00000226994.3
29	lnc-CRIM1-1	chr2:35384150-35384221	XLOC_001425
30	lnc-CRIM1-1	chr2:35387842-35387905	XLOC_001425
31	lnc-CRIM1-1	chr2:35387997-35388125	ENSG00000226994.3
32	lnc-CRIM1-1	chr2:35387997-35388125	ENSG00000226994.3
33	lnc-CRIM1-1	chr2:35384150-35384221	ENSG00000226994.3
34	lnc-CRIM1-1	chr2:35397858-35398245	ENSG00000226994.3
35	lnc-CRIM1-1	chr2:35387997-35388125	ENSG00000226994.3
36	lnc-CRIM1-1	chr2:35388867-35389031	ENSG00000226994.3
37	lnc-CRIM1-1	chr2:35395244-35395415	ENSG00000226994.3
38	lnc-CRIM1-1	chr2:35384613-35384694	ENSG00000226994.3
39	lnc-CRIM1-1	chr2:35387842-35387905	ENSG00000226994.3

No data

Variant related genes	Relation type
ENSG00000196085	TF binding region
ENSG00000226994	TF binding region
ENSG00000196085	CpG island
ENSG00000226994	CpG island
NAPEPLD	miRNA target sites

Extended variants
information (count: 1875 )
Associated
traits (count: 64 )

Variant overlapped rSNPs/rCNVs (count:1875 , 50 per page) page: 1 2 3 4 5 6 7 ... 38

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs76461840	chr2:35350217-35350218	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
2	rs188863929	chr2:35350238-35350239	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
3	rs540988297	chr2:35350250-35350251	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
4	rs577824282	chr2:35350262-35350263	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
5	rs559193944	chr2:35350274-35350275	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
6	rs553900447	chr2:35350299-35350300	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
7	rs78684189	chr2:35350300-35350301	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
8	rs544420791	chr2:35350320-35350321	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
9	rs79710208	chr2:35350327-35350328	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
10	rs375657244	chr2:35350334-35350335	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
11	rs562277932	chr2:35350357-35350358	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
12	rs575623681	chr2:35350364-35350365	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
13	rs193091955	chr2:35350367-35350368	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
14	rs529748618	chr2:35350383-35350384	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
15	rs564735673	chr2:35350387-35350388	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
16	rs548539511	chr2:35350388-35350389	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
17	rs563523641	chr2:35350414-35350415	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
18	rs533641229	chr2:35350426-35350427	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
19	rs116032768	chr2:35350454-35350455	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
20	rs148856480	chr2:35350509-35350510	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
21	rs184217081	chr2:35350520-35350521	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
22	rs549486513	chr2:35350548-35350549	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
23	rs569419025	chr2:35350558-35350559	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
24	rs531843723	chr2:35350559-35350560	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
25	rs551761320	chr2:35350571-35350572	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
26	rs571569358	chr2:35350579-35350580	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
27	rs371453294	chr2:35350593-35350594	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
28	rs35539668	chr2:35365230-35365231	Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs530443028	chr2:35365258-35365259	Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs80222549	chr2:35365278-35365279	Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs147441270	chr2:35365291-35365292	Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs2371737	chr2:35365325-35365326	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
33	rs78946902	chr2:35365347-35365348	Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs4588166	chr2:35365360-35365361	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
35	rs534787668	chr2:35365376-35365377	Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs554971791	chr2:35365402-35365403	Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs568330099	chr2:35365430-35365431	Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs537361466	chr2:35365437-35365438	Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs75098415	chr2:35365452-35365453	Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs577205835	chr2:35365477-35365478	Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs536099542	chr2:35365493-35365494	Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs546834696	chr2:35365507-35365508	Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs546060608	chr2:35365509-35365510	Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs575719501	chr2:35365511-35365512	Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs375507200	chr2:35365523-35365524	Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs554185731	chr2:35365530-35365531	Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs115870350	chr2:35379952-35379953	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
48	rs78495373	chr2:35380008-35380009	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
49	rs568602059	chr2:35380055-35380056	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
50	rs573617655	chr2:35381650-35381651	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:64)

Disease	PMID	Source
Breast cancer	17393978	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Breast cancer	17603634	CNVD
Medulloblastoma	21979893	CNVD
Lynch syndrome	18415027	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Ovarian neoplasms	16753589	CNVD
Glioblastoma multiforme	17387387	CNVD
Neuroblastoma	17533364	CNVD
Neuroblastoma	18923191	CNVD
Endometrial cancer	22040021	CNVD
Adrenal tumor	17535989	CNVD
Breast cancer	21264507	CNVD
Basal cell lymphoma	17053054	CNVD
Medulloblastoma	17522785	CNVD
Cancer	23418310	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Ependymoma	16718352	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
lymphocytic leukemia	21291569	CNVD
Prostate cancer	18632612	CNVD
Bladder cancer	21909424	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Intellectual disability	22102821	CNVD
Cancer	20164919	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Autism	22495311	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Follicular lymphoma	20505157	CNVD
Autism	17483303	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Esophageal adenocarcinoma	18519675	CNVD
Medulloblastoma	20607354	CNVD
Leukemia	18628472	CNVD
Autism	19521722	CNVD
Autism	18522746	CNVD
Breast cancer	21364760	CNVD
Wilms tumour	21544195	CNVD
Non-small cell lung cancer	18927303	CNVD
Hereditary gingival fibromatosis	19633868	CNVD
Breast cancer	21785460	CNVD
Lung cancer	18438408	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	21045282	CNVD
Prostate cancer	21965145	CNVD
Breast cancer	16397240	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Neuroblastoma	21508638	CNVD
Neurodevelopmental disorder	22521361	CNVD
Neurocytoma	17123091	CNVD
Autism	22495309	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
small cell lung cancer	20016488	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Schizophrenia	23813976	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD

Chromatin state (count:107 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:35350200-35350600	ZNF genes & repeats	Foreskin Melanocyte Primary Cells skin01	Skin
2	chr2:35365200-35365600	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr2:35386000-35386400	Enhancers	HUES6 Cell Line	embryonic stem cell
4	chr2:35400200-35400400	Bivalent Enhancer	ES-I3 Cell Line	embryonic stem cell
5	chr2:35400200-35400600	Enhancers	iPS-15b Cell Line	embryonic stem cell
6	chr2:35400200-35400800	Bivalent Enhancer	HUES48 Cell Line	embryonic stem cell
7	chr2:35400400-35400800	Bivalent Enhancer	HUES64 Cell Line	embryonic stem cell
8	chr2:35400400-35400800	Bivalent Enhancer	iPS-18 Cell Line	embryonic stem cell
9	chr2:35400400-35401000	Bivalent Enhancer	HUES6 Cell Line	embryonic stem cell
10	chr2:35400600-35400800	Bivalent Enhancer	iPS-15b Cell Line	embryonic stem cell
11	chr2:35401400-35401800	Bivalent/Poised TSS	ES-I3 Cell Line	embryonic stem cell
12	chr2:35401600-35401800	Bivalent Enhancer	HUES48 Cell Line	embryonic stem cell
13	chr2:35401600-35402200	Bivalent/Poised TSS	HUES6 Cell Line	embryonic stem cell
14	chr2:35401600-35403000	Bivalent Enhancer	HUES64 Cell Line	embryonic stem cell
15	chr2:35402000-35402400	Bivalent Enhancer	iPS-18 Cell Line	embryonic stem cell
16	chr2:35402200-35402400	Bivalent Enhancer	HUES6 Cell Line	embryonic stem cell
17	chr2:35402200-35402400	Flanking Bivalent TSS/Enh	iPS-20b Cell Line	embryonic stem cell
18	chr2:35402200-35403000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
19	chr2:35402400-35402600	Bivalent Enhancer	HUES48 Cell Line	embryonic stem cell
20	chr2:35403000-35403400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
21	chr2:35403400-35404000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
22	chr2:35403800-35404000	Bivalent Enhancer	HUES48 Cell Line	embryonic stem cell
23	chr2:35403800-35404000	Bivalent Enhancer	HUES6 Cell Line	embryonic stem cell
24	chr2:35403800-35404000	Bivalent Enhancer	HUES64 Cell Line	embryonic stem cell
25	chr2:35403800-35404200	Bivalent Enhancer	iPS-15b Cell Line	embryonic stem cell
26	chr2:35404000-35404200	Bivalent Enhancer	iPS-20b Cell Line	embryonic stem cell
27	chr2:35409600-35409800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
28	chr2:35409800-35411000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
29	chr2:35411000-35411600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
30	chr2:35422400-35423200	Enhancers	ES-I3 Cell Line	embryonic stem cell
31	chr2:35422400-35423200	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
32	chr2:35423000-35423200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
33	chr2:35423000-35423400	Enhancers	iPS-18 Cell Line	embryonic stem cell
34	chr2:35423200-35423400	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
35	chr2:35423400-35428600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
36	chr2:35445600-35445800	ZNF genes & repeats	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
37	chr2:35445600-35446000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
38	chr2:35445800-35447800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
39	chr2:35452200-35452400	Enhancers	ES-I3 Cell Line	embryonic stem cell
40	chr2:35452200-35452600	Enhancers	HUES48 Cell Line	embryonic stem cell
41	chr2:35452200-35454800	Enhancers	iPS-18 Cell Line	embryonic stem cell
42	chr2:35452400-35453400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
43	chr2:35452400-35454800	Enhancers	iPS-15b Cell Line	embryonic stem cell
44	chr2:35452600-35453000	Weak transcription	HUES48 Cell Line	embryonic stem cell
45	chr2:35452600-35454600	Enhancers	HUES6 Cell Line	embryonic stem cell
46	chr2:35453000-35453400	Enhancers	ES-WA7 Cell Line	embryonic stem cell
47	chr2:35453000-35454000	Enhancers	HUES48 Cell Line	embryonic stem cell
48	chr2:35453200-35453800	Enhancers	HUES64 Cell Line	embryonic stem cell
49	chr2:35453200-35454400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
50	chr2:35453400-35453600	Enhancers	ES-I3 Cell Line	embryonic stem cell

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links