Variant report

Variant	nsv536271
Chromosome Location	chr3:93948-838994
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:3019)
CpG islands
(count:2627)
Chromatin interactive
region (count:86)
LncRNA
region (count:58)
Mature miRNA
region (count: 0)
miRNA target
sites (count:3)

(count:3019 , 50 per page) page: 1 2 3 4 5 6 7 ... 61

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr3:534692-534822	HepG2	liver:	n/a	n/a
2	ARID3A	chr3:455772-456068	HepG2	liver:	n/a	chr3:455850-455866
3	ARID3A	chr3:291259-291870	HepG2	liver:	n/a	n/a
4	ARID3A	chr3:305517-307368	HepG2	liver:	n/a	n/a
5	ARID3A	chr3:418748-419094	HepG2	liver:	n/a	n/a
6	ARID3A	chr3:104725-105176	HepG2	liver:	n/a	n/a
7	ATF1	chr3:128118-128267	K562	blood:	n/a	n/a
8	ATF2	chr3:319829-320847	GM12878	blood:	n/a	n/a
9	ATF2	chr3:331761-332103	GM12878	blood:	n/a	n/a
10	ATF2	chr3:319964-320748	GM12878	blood:	n/a	n/a
11	ATF2	chr3:254098-254530	GM12878	blood:	n/a	n/a
12	ATF2	chr3:254017-254518	GM12878	blood:	n/a	n/a
13	ATF3	chr3:306304-306760	A549	lung:	n/a	n/a
14	BACH1	chr3:238826-240389	H1-hESC	embryonic stem cell:	n/a	n/a
15	BACH1	chr3:271174-271333	K562	blood:	n/a	n/a
16	BACH1	chr3:165624-165661	H1-hESC	embryonic stem cell:	n/a	n/a
17	BACH1	chr3:238302-238499	H1-hESC	embryonic stem cell:	n/a	n/a
18	BACH1	chr3:541423-541496	H1-hESC	embryonic stem cell:	n/a	n/a
19	BACH1	chr3:577662-577951	H1-hESC	embryonic stem cell:	n/a	n/a
20	BACH1	chr3:516562-516874	H1-hESC	embryonic stem cell:	n/a	n/a
21	BATF	chr3:254085-254416	GM12878	blood:	n/a	n/a
22	BATF	chr3:320384-320805	GM12878	blood:	n/a	n/a
23	BATF	chr3:599827-600084	GM12878	blood:	n/a	chr3:599953-599962
24	BATF	chr3:341729-341996	GM12878	blood:	n/a	n/a
25	BATF	chr3:515030-515408	GM12878	blood:	n/a	chr3:515252-515263
26	BATF	chr3:599789-600089	GM12878	blood:	n/a	chr3:599953-599962
27	BATF	chr3:638972-639242	GM12878	blood:	n/a	chr3:639093-639102
28	BATF	chr3:319906-320293	GM12878	blood:	n/a	n/a
29	BATF	chr3:166561-166841	GM12878	blood:	n/a	chr3:166679-166690 chr3:166653-166662
30	BATF	chr3:462357-462600	GM12878	blood:	n/a	chr3:462485-462494
31	BATF	chr3:166548-166773	GM12878	blood:	n/a	chr3:166679-166690 chr3:166653-166662
32	BATF	chr3:259675-259847	GM12878	blood:	n/a	n/a
33	BATF	chr3:462277-462661	GM12878	blood:	n/a	chr3:462485-462494
34	BATF	chr3:319974-320310	GM12878	blood:	n/a	n/a
35	BATF	chr3:505464-505768	GM12878	blood:	n/a	n/a
36	BATF	chr3:515014-515376	GM12878	blood:	n/a	chr3:515252-515263
37	BCL11A	chr3:319927-320341	GM12878	blood:	n/a	chr3:320201-320210 chr3:320061-320069
38	BCL11A	chr3:319942-320280	GM12878	blood:	n/a	chr3:320201-320210 chr3:320061-320069
39	BCL3	chr3:306168-306863	A549	lung:	n/a	chr3:306285-306294 chr3:306282-306291
40	BCL3	chr3:320464-320727	GM12878	blood:	n/a	n/a
41	BCL3	chr3:306315-306750	A549	lung:	n/a	n/a
42	BCLAF1	chr3:599656-600200	GM12878	blood:	n/a	chr3:599779-599788 chr3:599826-599835
43	BCLAF1	chr3:320388-320763	GM12878	blood:	n/a	n/a
44	BHLHE40	chr3:150637-150664	A549	lung:	n/a	n/a
45	BHLHE40	chr3:401416-401710	GM12878	blood:	n/a	n/a
46	BHLHE40	chr3:394710-394716	GM12878	blood:	n/a	n/a
47	BHLHE40	chr3:462348-462658	GM12878	blood:	n/a	n/a
48	BHLHE40	chr3:260829-261058	GM12878	blood:	n/a	n/a
49	BHLHE40	chr3:306286-306823	HepG2	liver:	n/a	n/a
50	BHLHE40	chr3:152996-153196	A549	lung:	n/a	n/a

(count:2627 , 50 per page) page: 1 2 3 4 5 6 7 ... 53

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr3:353166-353216	AG09309	skin:	n/a
2	chr3:351003-351053	Hepatocyte	liver:	n/a
3	chr3:350789-350839	SAEC	small airway:	n/a
4	chr3:501673-501723	T-47D	breast:	n/a
5	chr3:353166-353216	AG09309	skin:	n/a
6	chr3:351003-351053	Hepatocyte	liver:	n/a
7	chr3:350789-350839	SAEC	small airway:	n/a
8	chr3:501673-501723	T-47D	breast:	n/a
9	chr3:350789-350839	HAEpiC	amniotic membrane:	n/a
10	chr3:347869-347919	HRPEpiC	eye:	n/a
11	chr3:577821-577871	HCM	heart:	n/a
12	chr3:240139-240189	HEEpiC	esophagus:	n/a
13	chr3:238615-238665	SK-N-MC	brain:	n/a
14	chr3:350892-350942	AG09309	skin:	n/a
15	chr3:239733-239783	AG04450	lung:	fetal
16	chr3:350682-350732	SK-N-SH	brain:	n/a
17	chr3:427757-427807	NHBE	bronchial:	n/a
18	chr3:427757-427807	K562	blood:	n/a
19	chr3:347869-347919	ECC-1	luminal epithelium:	n/a
20	chr3:238496-238546	HepG2	liver:	n/a
21	chr3:236078-236128	Hela-S3	cervix:	n/a
22	chr3:782757-782807	GM12878	blood:	n/a
23	chr3:523375-523425	HEEpiC	esophagus:	n/a
24	chr3:427757-427807	ProgFib	skin:	n/a
25	chr3:239665-239715	HEEpiC	esophagus:	n/a
26	chr3:239229-239279	GM12891	blood:	n/a
27	chr3:353166-353216	AG04450	lung:	fetal
28	chr3:238048-238098	AG04450	lung:	fetal
29	chr3:501673-501723	H1-hESC	embryonic stem cell:	embryo
30	chr3:243996-244046	GM19239	blood:	n/a
31	chr3:350892-350942	IMR90	lung:	fetal
32	chr3:238496-238546	HCF	heart:	n/a
33	chr3:239188-239238	LNCaP	prostate:	n/a
34	chr3:427757-427807	MCF10A-Er-Src	breast:	n/a
35	chr3:240139-240189	HMEC	breast:	n/a
36	chr3:239188-239238	AG09319	gingival:	n/a
37	chr3:577964-578014	RPTEC	kidney:	n/a
38	chr3:238618-238668	GM19239	blood:	n/a
39	chr3:236078-236128	HNPCEpiC	eye:	n/a
40	chr3:238048-238098	HL-60	blood:	n/a
41	chr3:239506-239556	PrEC	prostate:	n/a
42	chr3:347869-347919	K562	blood:	n/a
43	chr3:239506-239556	HRPEpiC	eye:	n/a
44	chr3:351003-351053	AG10803	skin:	n/a
45	chr3:350602-350652	GM12878	blood:	n/a
46	chr3:347869-347919	ovcar-3	ovarian:	n/a
47	chr3:239665-239715	RPTEC	kidney:	n/a
48	chr3:271185-271235	HRCEpiC	kidney:	n/a
49	chr3:239506-239556	HRE	kidney:	n/a
50	chr3:353166-353216	SAEC	small airway:	n/a

(count:86 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr3:554700..557337-chr3:557649..560284,2	K562	blood:
2	chr3:709932..711493-chr3:712317..715172,2	K562	blood:
3	chr3:703062..705164-chr3:828470..830008,2	K562	blood:
4	chr3:731301..733205-chr3:733252..736265,3	K562	blood:
5	chr3:86365..87356-chr3:395941..396726,2	MCF-7	breast:
6	chr12:101154422..101155178-chr3:753774..754622,2	MCF-7	breast:
7	chr3:321596..323780-chr3:337949..340526,2	MCF-7	breast:
8	chr3:369627..372241-chr3:375088..376630,2	K562	blood:
9	chr3:333238..334968-chr3:337821..339342,2	MCF-7	breast:
10	chr3:512741..514299-chr3:528430..530623,2	K562	blood:
11	chr3:163984..165661-chr3:172610..174560,2	K562	blood:
12	chr3:369627..372241-chr3:375088..376630,2	K562	blood:
13	chr3:426526..428688-chr3:432686..435480,2	K562	blood:
14	chr3:297411..299702-chr3:300779..302869,2	K562	blood:
15	chr3:169328..170327-chr3:184848..185564,2	MCF-7	breast:
16	chr3:395767..396427-chr3:418920..419430,2	MCF-7	breast:
17	chr3:84468..85168-chr3:395782..396503,2	MCF-7	breast:
18	chr3:379607..381981-chr3:384960..386643,2	K562	blood:
19	chr3:323232..326179-chr3:404720..407065,2	K562	blood:
20	chr3:453296..456199-chr3:456966..458950,2	K562	blood:
21	chr3:423895..425881-chr3:427804..430449,2	K562	blood:
22	chr3:751166..753010-chr3:765105..767568,2	K562	blood:
23	chr3:188824..190368-chr3:386265..388997,2	MCF-7	breast:
24	chr3:762317..764340-chr3:779905..782757,2	K562	blood:
25	chr3:333238..334968-chr3:337821..339342,2	MCF-7	breast:
26	chr3:389768..391549-chr3:394844..396538,2	MCF-7	breast:
27	chr3:380749..382647-chr3:383286..385545,2	MCF-7	breast:
28	chr3:512741..514299-chr3:528430..530623,2	K562	blood:
29	chr21:9533639..9536328-chr3:614645..617390,2	MCF-7	breast:
30	chr14:56081549..56082133-chr3:97763..98653,2	MCF-7	breast:
31	chr3:188824..190368-chr3:386265..388997,2	MCF-7	breast:
32	chr3:565796..568589-chr3:571178..572728,2	K562	blood:
33	chr3:217250..219144-chr3:222760..225297,2	MCF-7	breast:
34	chr3:554700..557337-chr3:557649..560284,2	K562	blood:
35	chr3:453296..456199-chr3:456966..458950,2	K562	blood:
36	chr3:556350..557928-chr3:558208..559835,2	MCF-7	breast:
37	chr3:571404..573075-chr3:573790..576325,2	MCF-7	breast:
38	chr3:423895..425881-chr3:427804..430449,2	K562	blood:
39	chr3:522873..523625-chr3:674344..674995,2	MCF-7	breast:
40	chr3:674217..674800-chr3:1123463..1123990,2	MCF-7	breast:
41	chr3:762317..764340-chr3:779905..782757,2	K562	blood:
42	chr3:674203..674975-chr3:2197712..2198482,2	MCF-7	breast:
43	chr3:746367..749271-chr3:749542..752426,2	K562	blood:
44	chr3:389768..391549-chr3:394844..396538,2	MCF-7	breast:
45	chr3:379607..381981-chr3:384960..386643,2	K562	blood:
46	chr3:726576..727076-chr3:11025934..11026463,2	MCF-7	breast:
47	chr3:455533..456082-chr3:893341..894026,2	MCF-7	breast:
48	chr3:703062..705164-chr3:828470..830008,2	K562	blood:
49	chr3:380749..382647-chr3:383286..385545,2	MCF-7	breast:
50	chr3:805612..808013-chr3:811141..813375,2	K562	blood:

(count:58 , 50 per page) page: 1 2

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-CHL1-1	chr3:111531-111663	XLOC_002563
2	lnc-CHL1-3	chr3:633788-633866	ENSG00000224957
3	lnc-CHL1-3	chr3:577936-578010	ENSG00000224957
4	lnc-IL5RA-15	chr3:350397-351005	NONHSAT087564
5	lnc-IL5RA-6	chr3:238650-239024	ENSG00000224318.1
6	lnc-IL5RA-6	chr3:237679-237723	NONHSAT087559
7	lnc-CNTN6-7	chr3:288251-290282	NONHSAT087561
8	lnc-IL5RA-6	chr3:238139-238191	ENSG00000224318.1
9	lnc-IL5RA-6	chr3:238139-238191	ENSG00000224318.1
10	lnc-IL5RA-6	chr3:237679-237723	ENSG00000224318.1
11	lnc-IL5RA-6	chr3:237679-237723	ENSG00000224318.1
12	lnc-IL5RA-6	chr3:237679-237723	ENSG00000224318.1
13	lnc-IL5RA-5	chr3:415500-415735	ENSG00000234661.2
14	lnc-IL5RA-6	chr3:238139-238386	NONHSAT087559
15	lnc-CNTN6-7	chr3:254887-255362	NONHSAT087562
16	lnc-IL5RA-7	chr3:95976-96029	XLOC_003014
17	lnc-IL5RA-5	chr3:427386-427478	ENSG00000234661.1
18	lnc-IL5RA-5	chr3:405053-405706	ENSG00000234661.1
19	lnc-CNTN6-7	chr3:286296-286375	NONHSAT087560
20	lnc-CHL1-1	chr3:109008-109196	XLOC_002563
21	lnc-IL5RA-6	chr3:238139-238191	ENSG00000224318.1
22	lnc-CHL1-1	chr3:95888-96275	XLOC_002563
23	lnc-IL5RA-16	chr3:172879-173007	NONHSAT087554
24	lnc-IL5RA-5	chr3:405518-405706	ENSG00000234661.2
25	lnc-CHL1-1	chr3:111531-111980	XLOC_002563
26	lnc-CNTN6-7	chr3:288251-288539	NONHSAT087560
27	lnc-IL5RA-5	chr3:424250-424415	ENSG00000234661.1
28	lnc-IL5RA-6	chr3:238650-238882	ENSG00000224318.1
29	lnc-CHL1-3	chr3:633788-633866	NR_110118
30	lnc-IL5RA-16	chr3:157540-157624	NONHSAT087555
31	lnc-IL5RA-17	chr3:147879-148034	l_2301_chr3:147013-148034_heart
32	lnc-CHL1-1	chr3:95888-96275	XLOC_002563
33	lnc-CHL1-3	chr3:791898-791933	NR_110118
34	lnc-IL5RA-6	chr3:237441-237597	ENSG00000224318.1
35	lnc-CNTN6-7	chr3:239326-239775	NONHSAT087561
36	lnc-CHL1-3	chr3:791898-791933	ENSG00000224957
37	lnc-IL5RA-6	chr3:238290-238542	ENSG00000224318.1
38	lnc-IL5RA-16	chr3:153782-154143	NONHSAT087554
39	lnc-IL5RA-6	chr3:237441-237597	ENSG00000224318.1
40	lnc-CHL1-3	chr3:577941-579275	NONHSAT087570
41	lnc-CHL1-6	chr3:608788-608866	ucscGeneNc_uc003boy_1
42	lnc-IL5RA-14	chr3:659472-659997	NONHSAT087571
43	lnc-IL5RA-7	chr3:95031-95375	XLOC_003014
44	lnc-IL5RA-16	chr3:153927-154143	NONHSAT087555
45	lnc-CNTN6-7	chr3:239697-239775	NONHSAT087562
46	lnc-CNTN6-7	chr3:286296-286375	NONHSAT087561
47	lnc-CHL1-6	chr3:766898-766933	ucscGeneNc_uc003boy_1
48	lnc-CHL1-1	chr3:109401-109695	XLOC_002563
49	lnc-IL5RA-6	chr3:237441-237597	ENSG00000224318.1
50	lnc-IL5RA-16	chr3:157540-157620	NONHSAT087554

No data

(count:3 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location
1	CHL1	hsa-miR-181a-5p	chr3:448562-448584
2	CHL1	hsa-miR-10a-5p	chr3:450185-450191
3	CHL1	hsa-miR-10a-5p	chr3:450171-450192

Variant related genes	Relation type
RNU6-1194P	TF binding region
RPS8P6	TF binding region
CHL1-AS1	TF binding region
ENSG00000224918	TF binding region
CHL1-AS2	TF binding region
ENSG00000224957	TF binding region
ENSG00000238075	TF binding region
CHL1	TF binding region
RNU6-1194P	CpG island
RPS8P6	CpG island
CHL1-AS1	CpG island
ENSG00000224918	CpG island
CHL1-AS2	CpG island
ENSG00000224957	CpG island
ENSG00000238075	CpG island
CHL1	CpG island
ENSG00000252017	chromatin interactions
ENSG00000234661	chromatin interactions
DCBLD2	miRNA target sites
IL10	miRNA target sites

Extended variants
information (count: 22630 )
Associated
traits (count: 99 )

Variant overlapped rSNPs/rCNVs (count:22630 , 50 per page) page: 1 2 3 4 5 6 7 ... 453

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs187046988	chr3:95006-95007	Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs542506363	chr3:95026-95027	Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs539230420	chr3:95035-95036	Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
4	rs559045695	chr3:95049-95050	Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
5	rs554859245	chr3:95059-95060	Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
6	rs577261913	chr3:95091-95092	Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
7	rs541417200	chr3:95130-95131	Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
8	rs538864381	chr3:95141-95142	Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
9	rs575223468	chr3:95154-95155	Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
10	rs17323863	chr3:95172-95173	Enhancers	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
11	rs141385216	chr3:95198-95199	Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
12	rs191902830	chr3:95207-95208	Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
13	rs5019322	chr3:95214-95215	Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
14	rs114940036	chr3:95241-95242	Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
15	rs184330632	chr3:95257-95258	Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
16	rs546585797	chr3:95314-95315	Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
17	rs567684597	chr3:95315-95316	Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
18	rs529175223	chr3:95332-95333	Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
19	rs550491742	chr3:95347-95348	Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
20	rs568798490	chr3:95356-95357	Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
21	rs17075510	chr3:95357-95358	Enhancers	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
22	rs551239145	chr3:95361-95362	Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
23	rs564760430	chr3:95404-95405	Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs534772012	chr3:95409-95410	Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs190158673	chr3:95414-95415	Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs541171975	chr3:95506-95507	Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs146952269	chr3:95532-95533	Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs74777740	chr3:95545-95546	Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs369287552	chr3:95559-95560	Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs138050890	chr3:95572-95573	Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs142083116	chr3:95579-95580	Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs17040271	chr3:95597-95598	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
33	rs564482320	chr3:95602-95603	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs530327564	chr3:95613-95614	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs78386762	chr3:95727-95728	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs577046845	chr3:95728-95729	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs398061995	chr3:95737-95738	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs11293547	chr3:95738-95739	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs572910963	chr3:95779-95780	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs143012311	chr3:95802-95803	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs193239735	chr3:95824-95825	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs548551720	chr3:95837-95838	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs9866377	chr3:95854-95855	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs528893980	chr3:95859-95860	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs550153610	chr3:95863-95864	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs148194766	chr3:95868-95869	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs376233037	chr3:95933-95934	Enhancers Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
48	rs73816907	chr3:95935-95936	Enhancers Weak transcription	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
49	rs566518364	chr3:95967-95968	Enhancers Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
50	rs1400176	chr3:95973-95974	Enhancers Weak transcription	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance

Variant related diseases (count:99)

Disease	PMID	Source
Cancer	20164920	CNVD
Lung cancer	16618734	CNVD
Autism	18349135	CNVD
Breast cancer	20409316	CNVD
Myelofibrosis	22110671	CNVD
Autism	22241247	CNVD
Intellectual disability	22045946	CNVD
Squamous cell cancer	19607727	CNVD
Gastric adenocarcinoma	19115996	CNVD
sporadic birth defects	19047251	CNVD
Mental retardation	17124404	CNVD
abnormal development	18461090	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Sudden cardiac death	19188705	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Ovarian cancer	21720365	CNVD
Neuroblastoma	18923191	CNVD
Papillary thyroid carcinoma	21436994	CNVD
Biliary cancer	19435499	CNVD
Medulloblastoma	21979893	CNVD
Esophageal squamous carcinoma	18405350	CNVD
Breast cancer	17603634	CNVD
Neuroblastoma	17327916	CNVD
Glioblastoma multiforme	21080181	CNVD
Colorectal cancer	21297112	CNVD
Lynch syndrome	18415027	CNVD
Renal cell carcinoma	18592004	CNVD
Acute myeloid leukemia	20729466	CNVD
Urothelial carcinoma	18382360	CNVD
Melanoma	18172304	CNVD
Cervical cancer	21062161	CNVD
Hirschsprung''s Disease	21712996	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Insulin resistance	16721378	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Ewing''s sarcoma	21437220	CNVD
Neuroblastoma	21484798	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Oral cancer	19627613	CNVD
Renal cell carcinoma	19461508	CNVD
Epithelial cancer	22065749	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Acute myeloid leukemia	16864856	CNVD
Liposarcoma	21253554	CNVD
Basal cell lymphoma	21115979	CNVD
Endometrial cancer	22040021	CNVD
Pancreatic endocrine tumor	20981439	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	17387387	CNVD
Oral cancer	21386901	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Basal cell lymphoma	17053054	CNVD
Esophageal cancer	21851588	CNVD
Uveal melanoma	21693616	CNVD
Retinoblastoma	21504564	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	21364760	CNVD
Schizophrenia	20967226	CNVD
Autism	22543975	CNVD
Attention deficit hyperactivity disorder	19546859	CNVD
Ependymoma	20639864	CNVD
lymphocytic leukemia	21291569	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Non-syndromic sensorineural hearing loss	17289997	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Renal cell carcinoma	21668985	CNVD
Tetralogy of Fallot	22912587	CNVD
early-passage human iPS cells	21368824	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Autism	22495311	CNVD
Autism	20685689	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Non-syndromic sensorineural hearing loss	19587683	CNVD
Melanoma	20877625	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Multiple myeloma	17550852	CNVD
Prostate cancer	18632612	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Lung cancer	20668451	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Cancer	20164919	CNVD
Bipolar disorder	19114987	CNVD

Chromatin state (count:1966 , 50 per page) page: 1 2 3 4 5 6 7 ... 40

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:95000-95600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
2	chr3:95000-96600	Enhancers	Breast Myoepithelial Primary Cells	Breast
3	chr3:95600-104600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr3:97400-97600	Enhancers	Brain Hippocampus Middle	brain
5	chr3:97600-98000	Enhancers	Fetal Brain Male	brain
6	chr3:97800-98200	Active TSS	Fetal Brain Female	brain
7	chr3:98000-98600	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr3:98000-104800	Weak transcription	Fetal Brain Male	brain
9	chr3:98200-98600	Enhancers	Fetal Brain Female	brain
10	chr3:103600-104400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
11	chr3:103800-104200	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
12	chr3:104200-104400	Enhancers	Gastric	stomach
13	chr3:104400-104800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
14	chr3:104400-105000	Weak transcription	Gastric	stomach
15	chr3:104400-105400	Enhancers	HUES48 Cell Line	embryonic stem cell
16	chr3:104400-105400	Enhancers	HepG2	liver
17	chr3:104400-105600	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
18	chr3:104600-104800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
19	chr3:104600-104800	Enhancers	Adipose Nuclei	Adipose
20	chr3:104600-104800	Enhancers	Brain Substantia Nigra	brain
21	chr3:104600-105600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
22	chr3:104600-105600	Enhancers	Fetal Lung	lung
23	chr3:104800-105000	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
24	chr3:104800-105000	Active TSS	Brain Germinal Matrix	brain
25	chr3:104800-105000	Enhancers	Stomach Mucosa	stomach
26	chr3:104800-105200	Enhancers	Fetal Brain Male	brain
27	chr3:104800-105400	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
28	chr3:104800-105400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
29	chr3:104800-105400	Flanking Active TSS	Adipose Nuclei	Adipose
30	chr3:104800-105400	Enhancers	Brain Angular Gyrus	brain
31	chr3:104800-105400	Active TSS	Brain Inferior Temporal Lobe	brain
32	chr3:104800-105600	Enhancers	iPS-18 Cell Line	embryonic stem cell
33	chr3:104800-105600	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
34	chr3:104800-105600	Enhancers	Breast Myoepithelial Primary Cells	Breast
35	chr3:104800-105600	Enhancers	Cortex derived primary cultured neurospheres	brain
36	chr3:104800-105600	Enhancers	Brain Hippocampus Middle	brain
37	chr3:104800-105600	Flanking Active TSS	Brain Substantia Nigra	brain
38	chr3:104800-105600	Enhancers	Fetal Brain Female	brain
39	chr3:104800-105600	Enhancers	Psoas Muscle	Psoas
40	chr3:104800-105800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
41	chr3:105000-105200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
42	chr3:105000-105200	Enhancers	Liver	Liver
43	chr3:105000-105400	Enhancers	ES-I3 Cell Line	embryonic stem cell
44	chr3:105000-105400	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
45	chr3:105000-105400	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
46	chr3:105000-105400	Enhancers	Pancreas	Pancrea
47	chr3:105000-105600	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
48	chr3:105000-105600	Flanking Active TSS	Brain Anterior Caudate	brain
49	chr3:105000-105600	Enhancers	Brain Cingulate Gyrus	brain
50	chr3:105000-105600	Flanking Active TSS	Brain Germinal Matrix	brain

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