Variant report

Variant	nsv536303
Chromosome Location	chr3:594267-1347353
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:2357)
CpG islands
(count:735)
Chromatin interactive
region (count:60)
LncRNA
region (count:20)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:2357 , 50 per page) page: 1 2 3 4 5 6 7 ... 48

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF1	chr3:1056506-1056524	K562	blood:	n/a	n/a
2	ATF1	chr3:1235289-1235354	K562	blood:	n/a	n/a
3	ATF2	chr3:1172821-1173212	H1-hESC	embryonic stem cell:	n/a	n/a
4	BACH1	chr3:1135881-1135904	H1-hESC	embryonic stem cell:	n/a	n/a
5	BACH1	chr3:1277576-1277666	H1-hESC	embryonic stem cell:	n/a	n/a
6	BACH1	chr3:1249806-1249899	H1-hESC	embryonic stem cell:	n/a	chr3:1249829-1249843
7	BACH1	chr3:888492-888519	H1-hESC	embryonic stem cell:	n/a	n/a
8	BACH1	chr3:954485-954653	H1-hESC	embryonic stem cell:	n/a	n/a
9	BATF	chr3:599789-600089	GM12878	blood:	n/a	chr3:599953-599962
10	BATF	chr3:599827-600084	GM12878	blood:	n/a	chr3:599953-599962
11	BATF	chr3:954466-954707	GM12878	blood:	n/a	chr3:954539-954550 chr3:954567-954578 chr3:954595-954606
12	BATF	chr3:954370-954767	GM12878	blood:	n/a	chr3:954539-954550 chr3:954567-954578 chr3:954595-954606
13	BATF	chr3:638972-639242	GM12878	blood:	n/a	chr3:639093-639102
14	BATF	chr3:892892-893121	GM12878	blood:	n/a	chr3:892988-892999
15	BATF	chr3:892848-893082	GM12878	blood:	n/a	chr3:892988-892999
16	BCL11A	chr3:954445-954734	GM12878	blood:	n/a	n/a
17	BCL3	chr3:1149010-1149230	GM12878	blood:	n/a	n/a
18	BCLAF1	chr3:599656-600200	GM12878	blood:	n/a	chr3:599779-599788 chr3:599826-599835
19	BHLHE40	chr3:895419-895457	GM12878	blood:	n/a	n/a
20	BHLHE40	chr3:943924-944164	GM12878	blood:	n/a	n/a
21	BHLHE40	chr3:846853-846863	GM12878	blood:	n/a	n/a
22	BRCA1	chr3:1225226-1225621	Hela-S3	cervix:	n/a	n/a
23	BRCA1	chr3:815996-816027	Hela-S3	cervix:	n/a	n/a
24	BRCA1	chr3:961437-961458	GM12878	blood:	n/a	n/a
25	BRCA1	chr3:639591-639851	Hela-S3	cervix:	n/a	n/a
26	BRCA1	chr3:991509-991520	H1-hESC	embryonic stem cell:	n/a	n/a
27	BRCA1	chr3:754720-755580	Hela-S3	cervix:	n/a	n/a
28	BRCA1	chr3:1123741-1124044	Hela-S3	cervix:	n/a	n/a
29	BRCA1	chr3:817416-817453	Hela-S3	cervix:	n/a	n/a
30	BRCA1	chr3:638578-639330	Hela-S3	cervix:	n/a	n/a
31	BRCA1	chr3:674381-674581	H1-hESC	embryonic stem cell:	n/a	n/a
32	BRCA1	chr3:1128644-1129340	Hela-S3	cervix:	n/a	n/a
33	BRCA1	chr3:649451-649478	Hela-S3	cervix:	n/a	n/a
34	CEBPB	chr3:650039-650244	HepG2	liver:	n/a	chr3:650073-650084 chr3:650075-650084
35	CEBPB	chr3:1343908-1344126	HepG2	liver:	n/a	chr3:1344018-1344029 chr3:1344018-1344031
36	CEBPB	chr3:927603-927831	HepG2	liver:	n/a	chr3:927748-927759 chr3:927746-927757 chr3:927746-927759
37	CEBPB	chr3:986492-986830	HepG2	liver:	n/a	chr3:986667-986678
38	CEBPB	chr3:1225025-1225385	IMR90	lung:	n/a	chr3:1225189-1225200 chr3:1225191-1225200 chr3:1225191-1225202 chr3:1225191-1225200 chr3:1225189-1225202 chr3:1225189-1225202 chr3:1225191-1225200 chr3:1225191-1225200
39	CEBPB	chr3:1285005-1285364	A549	lung:	n/a	chr3:1285182-1285193
40	CEBPB	chr3:766028-766169	H1-hESC	embryonic stem cell:	n/a	n/a
41	CEBPB	chr3:700997-701241	H1-hESC	embryonic stem cell:	n/a	chr3:701126-701139 chr3:701128-701137 chr3:701128-701137 chr3:701128-701137
42	CEBPB	chr3:611097-611344	HepG2	liver:	n/a	chr3:611201-611212
43	CEBPB	chr3:1164082-1164363	H1-hESC	embryonic stem cell:	n/a	chr3:1164197-1164208
44	CEBPB	chr3:1266757-1267048	HepG2	liver:	n/a	chr3:1266885-1266896
45	CEBPB	chr3:1165286-1165427	H1-hESC	embryonic stem cell:	n/a	n/a
46	CEBPB	chr3:795219-795424	K562	blood:	n/a	n/a
47	CEBPB	chr3:1129010-1129359	HepG2	liver:	n/a	chr3:1129164-1129175
48	CEBPB	chr3:1128706-1129408	Hela-S3	cervix:	n/a	chr3:1129164-1129175 chr3:1128961-1128973
49	CEBPB	chr3:754275-756263	Hela-S3	cervix:	n/a	chr3:754384-754393 chr3:754382-754393 chr3:755103-755114
50	CEBPB	chr3:697395-697928	Hela-S3	cervix:	n/a	n/a

(count:735 , 50 per page) page: 1 2 3 4 5 6 7 ... 15

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr3:1133865-1133915	U87	brain:	n/a
2	chr3:1134005-1134055	K562	blood:	n/a
3	chr3:1133865-1133915	NHBE	bronchial:	n/a
4	chr3:1133865-1133915	U87	brain:	n/a
5	chr3:1134005-1134055	K562	blood:	n/a
6	chr3:1133865-1133915	NHBE	bronchial:	n/a
7	chr3:1134711-1134761	ProgFib	skin:	n/a
8	chr3:1134528-1134578	Jurkat	blood:	n/a
9	chr3:1134528-1134578	SK-N-SH_RA	brain:	n/a
10	chr3:1134005-1134055	RPTEC	kidney:	n/a
11	chr3:1133865-1133915	HRPEpiC	eye:	n/a
12	chr3:1229376-1229426	HCM	heart:	n/a
13	chr3:1133865-1133915	SK-N-SH	brain:	n/a
14	chr3:782757-782807	HRCEpiC	kidney:	n/a
15	chr3:1134711-1134761	IMR90	lung:	fetal
16	chr3:782757-782807	AG04449	skin:	fetal
17	chr3:1202463-1202513	H1-hESC	embryonic stem cell:	embryo
18	chr3:1134005-1134055	HCM	heart:	n/a
19	chr3:1229376-1229426	NHDF-neo	bronchial:	n/a
20	chr3:1134366-1134416	HCPEpiC	choroid plexus:	n/a
21	chr3:1229376-1229426	NHBE	bronchial:	n/a
22	chr3:1202463-1202513	AG09309	skin:	n/a
23	chr3:1134005-1134055	AoSMC	blood vessel:	n/a
24	chr3:1134005-1134055	NT2-D1	testis:	n/a
25	chr3:1134528-1134578	A549	lung:	n/a
26	chr3:1134005-1134055	Jurkat	blood:	n/a
27	chr3:1284705-1284755	GM19239	blood:	n/a
28	chr3:1134366-1134416	AG09309	skin:	n/a
29	chr3:1229376-1229426	H1-hESC	embryonic stem cell:	embryo
30	chr3:1134366-1134416	ProgFib	skin:	n/a
31	chr3:1229376-1229426	PrEC	prostate:	n/a
32	chr3:1229376-1229426	HMEC	breast:	n/a
33	chr3:1133865-1133915	ECC-1	luminal epithelium:	n/a
34	chr3:1173560-1173610	SK-N-SH_RA	brain:	n/a
35	chr3:1133865-1133915	HEEpiC	esophagus:	n/a
36	chr3:1202463-1202513	HCPEpiC	choroid plexus:	n/a
37	chr3:1134730-1134780	LNCaP	prostate:	n/a
38	chr3:1229376-1229426	AG09319	gingival:	n/a
39	chr3:1134528-1134578	RPTEC	kidney:	n/a
40	chr3:1134528-1134578	NB4	blood:	n/a
41	chr3:1133865-1133915	GM12892	blood:	n/a
42	chr3:1134005-1134055	SK-N-MC	brain:	n/a
43	chr3:1134366-1134416	PFSK-1	brain:	n/a
44	chr3:1133865-1133915	HEK293	kidney:	embryo
45	chr3:1134005-1134055	U87	brain:	n/a
46	chr3:782757-782807	SK-N-MC	brain:	n/a
47	chr3:1134366-1134416	GM12878	blood:	n/a
48	chr3:1133865-1133915	HCT-116	colon:	n/a
49	chr3:1134366-1134416	ECC-1	luminal epithelium:	n/a
50	chr3:1134711-1134761	SK-N-MC	brain:	n/a

(count:60 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr2:44471645..44472524-chr3:1084585..1085105,2	K562	blood:
2	chr1:229050784..229051693-chr3:758018..758663,2	MCF-7	breast:
3	chr3:455533..456082-chr3:893341..894026,2	MCF-7	breast:
4	chr3:1271635..1274308-chr3:1276225..1277746,2	K562	blood:
5	chr3:1185425..1187107-chr3:1188609..1190735,2	K562	blood:
6	chr3:1091106..1092914-chr3:1094575..1097571,2	K562	blood:
7	chr3:746367..749271-chr3:749542..752426,2	K562	blood:
8	chr3:1145760..1147872-chr3:1156472..1158821,2	K562	blood:
9	chr3:674203..674975-chr3:2197712..2198482,2	MCF-7	breast:
10	chr17:59489294..59491290-chr3:1177376..1179707,2	MCF-7	breast:
11	chr3:1049665..1052589-chr3:1054165..1056315,2	K562	blood:
12	chr3:762317..764340-chr3:779905..782757,2	K562	blood:
13	chr3:1271635..1273502-chr3:1276225..1279196,2	K562	blood:
14	chr3:746367..749271-chr3:749542..752426,2	K562	blood:
15	chr3:1233578..1235618-chr3:1243417..1246040,2	K562	blood:
16	chr20:14175439..14177996-chr3:730394..733241,2	MCF-7	breast:
17	chr21:9533639..9536328-chr3:614645..617390,2	MCF-7	breast:
18	chr3:1089175..1092606-chr3:1092889..1096075,3	K562	blood:
19	chr3:1123403..1124144-chr3:2029373..2030343,3	MCF-7	breast:
20	chr3:762317..764340-chr3:779905..782757,2	K562	blood:
21	chr3:1089175..1092606-chr3:1092889..1096075,3	K562	blood:
22	chr3:1183195..1185033-chr3:1185128..1187712,2	MCF-7	breast:
23	chr21:9517250..9519290-chr3:632442..635070,2	MCF-7	breast:
24	chr3:674217..674800-chr3:1123463..1123990,2	MCF-7	breast:
25	chr3:1233578..1235618-chr3:1243417..1246040,2	K562	blood:
26	chr20:19743891..19744638-chr3:1326228..1327123,2	MCF-7	breast:
27	chr3:943774..944505-chr3:1390119..1390838,2	MCF-7	breast:
28	chr3:1091106..1092914-chr3:1094575..1097571,2	K562	blood:
29	chr3:844122..846364-chr3:847958..849773,2	K562	blood:
30	chr3:731301..733205-chr3:733252..736265,3	K562	blood:
31	chr3:726576..727076-chr3:11025934..11026463,2	MCF-7	breast:
32	chr3:1185425..1187107-chr3:1188609..1190735,2	K562	blood:
33	chr3:751166..753010-chr3:765105..767568,2	K562	blood:
34	chr3:829999..831597-chr3:832456..834541,2	MCF-7	breast:
35	chr3:1123458..1124156-chr3:2755562..2756408,3	MCF-7	breast:
36	chr21:9537493..9539688-chr3:612236..614804,2	MCF-7	breast:
37	chr3:805612..808013-chr3:811141..813375,2	K562	blood:
38	chr3:805612..808013-chr3:811141..813375,2	K562	blood:
39	chr3:731301..733205-chr3:733252..736265,3	K562	blood:
40	chr3:1183195..1185033-chr3:1185128..1187712,2	MCF-7	breast:
41	chr3:844122..846364-chr3:847958..849773,2	K562	blood:
42	chr3:703062..705164-chr3:828470..830008,2	K562	blood:
43	chr3:829999..831597-chr3:832456..834541,2	MCF-7	breast:
44	chr3:1017513..1019704-chr9:130832900..130835546,2	MCF-7	breast:
45	chr3:674217..674800-chr3:1123463..1123990,2	MCF-7	breast:
46	chr3:1271635..1274308-chr3:1276225..1277746,2	K562	blood:
47	chr3:522873..523625-chr3:674344..674995,2	MCF-7	breast:
48	chr3:1043997..1046659-chr3:1048163..1050652,2	K562	blood:
49	chr3:709932..711493-chr3:712317..715172,2	K562	blood:
50	chr12:51631069..51633376-chr3:1005382..1008189,2	MCF-7	breast:

(count:20 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-CNTN6-2	chr3:899428-900630	NONHSAT087575
2	lnc-CHL1-3	chr3:791898-791933	ENSG00000224957
3	lnc-CNTN6-2	chr3:898807-898956	XLOC_002565
4	lnc-CHL1-3	chr3:633788-633866	ENSG00000224957
5	lnc-CHL1-3	chr3:882398-882493	NR_110118
6	lnc-CHL1-3	chr3:791898-791933	NR_110118
7	lnc-CHL1-3	chr3:884059-884327	ENSG00000224957
8	lnc-IL5RA-13	chr3:1107266-1107559	NONHSAT087577
9	lnc-CNTN6-1	chr3:1049819-1049950	XLOC_002566
10	lnc-CHL1-3	chr3:868690-868816	ENSG00000224957
11	lnc-IL5RA-14	chr3:659472-659997	NONHSAT087571
12	lnc-CHL1-6	chr3:608788-608866	ucscGeneNc_uc003boy_1
13	lnc-CNTN6-1	chr3:1051052-1054618	XLOC_002566
14	lnc-CHL1-6	chr3:857398-857493	ucscGeneNc_uc003boy_1
15	lnc-CNTN6-2	chr3:899428-899774	XLOC_002565
16	lnc-CHL1-6	chr3:859059-862698	ucscGeneNc_uc003boy_1
17	lnc-CHL1-3	chr3:633788-633866	NR_110118
18	lnc-CHL1-3	chr3:884059-887698	NR_110118
19	lnc-CNTN6-2	chr3:898848-898956	NONHSAT087575
20	lnc-CHL1-6	chr3:766898-766933	ucscGeneNc_uc003boy_1

No data

Variant related genes	Relation type
RN7SL120P	TF binding region
CNTN6	TF binding region
ENSG00000235158	TF binding region
ENSG00000224239	TF binding region
ENSG00000238075	TF binding region
RN7SL120P	CpG island
CNTN6	CpG island
ENSG00000235158	CpG island
ENSG00000224239	CpG island
ENSG00000238075	CpG island
ENSG00000183283	chromatin interactions
ENSG00000235158	chromatin interactions
HIF1A	miRNA target sites
CPEB4	miRNA target sites
COPS7A	miRNA target sites
IL10	miRNA target sites
DCBLD2	miRNA target sites

Extended variants
information (count: 12737 )
Associated
traits (count: 98 )

Variant overlapped rSNPs/rCNVs (count:12737 , 50 per page) page: 1 2 3 4 5 6 7 ... 255

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs538224875	chr3:594304-594305	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs527941810	chr3:594318-594319	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs572217998	chr3:594337-594338	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs556708049	chr3:594341-594342	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs148525591	chr3:594357-594358	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs545224693	chr3:594408-594409	Enhancers Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs553966656	chr3:594427-594428	Enhancers Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs114928618	chr3:594489-594490	Enhancers Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs73095109	chr3:594529-594530	Enhancers Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
10	rs561212841	chr3:594538-594539	Enhancers Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs531224448	chr3:594549-594550	Enhancers Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs193292065	chr3:594601-594602	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs80105338	chr3:594608-594609	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs575658529	chr3:594613-594614	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs182373657	chr3:594635-594636	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs547083707	chr3:594672-594673	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs566772689	chr3:594691-594692	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs527866440	chr3:594714-594715	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs369940464	chr3:594772-594773	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs531700681	chr3:594786-594787	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs549902762	chr3:594827-594828	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs187869346	chr3:594835-594836	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs1484529	chr3:594868-594869	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs192608789	chr3:594875-594876	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs145358101	chr3:594880-594881	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs184233151	chr3:594890-594891	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs550148941	chr3:594904-594905	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs147233610	chr3:594952-594953	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs372477160	chr3:594983-594984	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs539176370	chr3:595024-595025	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs140711165	chr3:595092-595093	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs572174741	chr3:595125-595126	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs73095110	chr3:595129-595130	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
34	rs374116558	chr3:595146-595147	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs554590437	chr3:595202-595203	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs576240961	chr3:595233-595234	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs13327437	chr3:595236-595237	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
38	rs116912571	chr3:595248-595249	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs188806095	chr3:595250-595251	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs116028892	chr3:595259-595260	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs540758373	chr3:595285-595286	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs376550307	chr3:595293-595294	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs559010430	chr3:595317-595318	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs532081317	chr3:595340-595341	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs527897284	chr3:595350-595351	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs547557865	chr3:595372-595373	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs192067134	chr3:595393-595394	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs561424134	chr3:595406-595407	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs145318405	chr3:595467-595468	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs147637606	chr3:595517-595518	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:98)

Disease	PMID	Source
Cancer	20164920	CNVD
Lung cancer	16618734	CNVD
Autism	18349135	CNVD
Breast cancer	20409316	CNVD
Myelofibrosis	22110671	CNVD
Autism	22241247	CNVD
Intellectual disability	22045946	CNVD
Squamous cell cancer	19607727	CNVD
Gastric adenocarcinoma	19115996	CNVD
sporadic birth defects	19047251	CNVD
Mental retardation	17124404	CNVD
abnormal development	18461090	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Sudden cardiac death	19188705	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Ovarian cancer	21720365	CNVD
Neuroblastoma	18923191	CNVD
Papillary thyroid carcinoma	21436994	CNVD
Biliary cancer	19435499	CNVD
Medulloblastoma	21979893	CNVD
Esophageal squamous carcinoma	18405350	CNVD
Breast cancer	17603634	CNVD
Neuroblastoma	17327916	CNVD
Glioblastoma multiforme	21080181	CNVD
Colorectal cancer	21297112	CNVD
Lynch syndrome	18415027	CNVD
Renal cell carcinoma	18592004	CNVD
Acute myeloid leukemia	20729466	CNVD
Urothelial carcinoma	18382360	CNVD
Melanoma	18172304	CNVD
Cervical cancer	21062161	CNVD
Hirschsprung''s Disease	21712996	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Insulin resistance	16721378	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Ewing''s sarcoma	21437220	CNVD
Neuroblastoma	21484798	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Oral cancer	19627613	CNVD
Renal cell carcinoma	19461508	CNVD
Epithelial cancer	22065749	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Acute myeloid leukemia	16864856	CNVD
Liposarcoma	21253554	CNVD
Basal cell lymphoma	21115979	CNVD
Endometrial cancer	22040021	CNVD
Pancreatic endocrine tumor	20981439	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	17387387	CNVD
Oral cancer	21386901	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Basal cell lymphoma	17053054	CNVD
Esophageal cancer	21851588	CNVD
Uveal melanoma	21693616	CNVD
Retinoblastoma	21504564	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	21364760	CNVD
Schizophrenia	20967226	CNVD
Autism	22543975	CNVD
Attention deficit hyperactivity disorder	19546859	CNVD
lymphocytic leukemia	21291569	CNVD
Non-syndromic sensorineural hearing loss	17289997	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Renal cell carcinoma	21668985	CNVD
Tetralogy of Fallot	22912587	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Autism	20685689	CNVD
Multiple myeloma	17550852	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Hodgkin''s lymphoma	17606441	CNVD
early-passage human iPS cells	21368824	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Lung cancer	20668451	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Autism	22495311	CNVD
Cancer	20164919	CNVD
Bipolar disorder	19114987	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Lung cancer	18438408	CNVD
Breast cancer	22522925	CNVD
Rectal cancer	20877625	CNVD
cervicovaginal lavage	20877625	CNVD
Melanoma	20877625	CNVD
Pancreatic cancer	17952125	CNVD

Chromatin state (count:628 , 50 per page) page: 1 2 3 4 5 6 7 ... 13

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:590600-594400	Weak transcription	Fetal Muscle Leg	muscle
2	chr3:590600-595600	Weak transcription	Fetal Muscle Trunk	muscle
3	chr3:593800-595000	Enhancers	Hela-S3	cervix
4	chr3:594400-594600	Enhancers	Aorta	Aorta
5	chr3:594400-597200	Strong transcription	Fetal Muscle Leg	muscle
6	chr3:594600-607600	Weak transcription	Aorta	Aorta
7	chr3:595600-597000	Strong transcription	Fetal Muscle Trunk	muscle
8	chr3:597000-598600	Weak transcription	Fetal Muscle Trunk	muscle
9	chr3:597200-602600	Weak transcription	Fetal Muscle Leg	muscle
10	chr3:599200-599400	Enhancers	GM12878-XiMat	blood
11	chr3:599400-599800	Flanking Active TSS	GM12878-XiMat	blood
12	chr3:599800-600600	Enhancers	GM12878-XiMat	blood
13	chr3:602600-603200	Enhancers	Fetal Muscle Leg	muscle
14	chr3:602800-603000	Enhancers	Fetal Brain Male	brain
15	chr3:603000-606000	Weak transcription	Fetal Brain Male	brain
16	chr3:603200-603400	Weak transcription	Fetal Muscle Leg	muscle
17	chr3:606000-607000	Enhancers	Fetal Brain Male	brain
18	chr3:607000-610000	Weak transcription	Fetal Brain Male	brain
19	chr3:607600-608400	Enhancers	Aorta	Aorta
20	chr3:608800-610600	Enhancers	Brain Germinal Matrix	brain
21	chr3:610000-611200	Enhancers	Fetal Brain Male	brain
22	chr3:610200-610600	Enhancers	Ovary	ovary
23	chr3:611200-612400	Weak transcription	Fetal Brain Male	brain
24	chr3:612600-612800	Enhancers	Fetal Brain Male	brain
25	chr3:636400-642600	Enhancers	Hela-S3	cervix
26	chr3:639200-639800	Enhancers	Dnd41	blood
27	chr3:649000-650000	Enhancers	Hela-S3	cervix
28	chr3:649200-650200	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
29	chr3:659600-660000	Active TSS	Spleen	Spleen
30	chr3:663600-664000	Enhancers	Fetal Brain Male	brain
31	chr3:674200-674800	Enhancers	Brain Substantia Nigra	brain
32	chr3:674200-675000	Enhancers	Hela-S3	cervix
33	chr3:675800-676400	Enhancers	Fetal Thymus	thymus
34	chr3:682800-683200	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
35	chr3:684800-685200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
36	chr3:697200-697600	Enhancers	Hela-S3	cervix
37	chr3:703200-703400	Enhancers	Pancreatic Islets	Pancreatic Islet
38	chr3:703400-703800	Flanking Active TSS	Pancreatic Islets	Pancreatic Islet
39	chr3:706200-708000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
40	chr3:715600-716600	Enhancers	Fetal Brain Male	brain
41	chr3:716600-717800	Weak transcription	Fetal Brain Male	brain
42	chr3:718000-718200	Enhancers	Fetal Brain Male	brain
43	chr3:722800-723800	Enhancers	Hela-S3	cervix
44	chr3:723800-724400	Weak transcription	Hela-S3	cervix
45	chr3:724400-724600	Enhancers	Hela-S3	cervix
46	chr3:727000-727200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
47	chr3:729000-729400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
48	chr3:730600-732600	Weak transcription	Fetal Muscle Trunk	muscle
49	chr3:732000-732800	ZNF genes & repeats	Aorta	Aorta
50	chr3:732200-732400	ZNF genes & repeats	H1 Derived Mesenchymal Stem Cells	ES cell derived

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