Variant report

Variant	nsv536679
Chromosome Location	chr3:105718749-106331879
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:4057)
CpG islands
(count:550)
Chromatin interactive
region (count:115)
LncRNA
region (count:64)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:4057 , 50 per page) page: 1 2 3 4 5 6 7 ... 82

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr3:105833713-105834164	K562	blood:	n/a	n/a
2	ARID3A	chr3:105849346-105850590	K562	blood:	n/a	chr3:105849358-105849374
3	ARID3A	chr3:105722899-105723573	K562	blood:	n/a	n/a
4	ARID3A	chr3:105927888-105928150	K562	blood:	n/a	n/a
5	ARID3A	chr3:105947311-105947418	K562	blood:	n/a	n/a
6	ATF1	chr3:105915582-105915782	K562	blood:	n/a	n/a
7	ATF1	chr3:105833703-105833926	K562	blood:	n/a	n/a
8	ATF1	chr3:105718646-105719040	K562	blood:	n/a	n/a
9	ATF1	chr3:105722925-105723493	K562	blood:	n/a	n/a
10	ATF2	chr3:105967123-105967568	GM12878	blood:	n/a	n/a
11	ATF2	chr3:105895403-105896156	GM12878	blood:	n/a	n/a
12	ATF2	chr3:105891524-105892110	GM12878	blood:	n/a	n/a
13	ATF2	chr3:106051681-106052075	GM12878	blood:	n/a	n/a
14	ATF2	chr3:105967110-105967617	GM12878	blood:	n/a	n/a
15	ATF2	chr3:106328284-106328895	GM12878	blood:	n/a	n/a
16	ATF2	chr3:106017812-106018705	GM12878	blood:	n/a	n/a
17	ATF2	chr3:106051712-106052156	GM12878	blood:	n/a	n/a
18	ATF2	chr3:106021079-106021955	GM12878	blood:	n/a	n/a
19	ATF2	chr3:105895308-105896114	GM12878	blood:	n/a	n/a
20	ATF2	chr3:105975176-105975869	GM12878	blood:	n/a	n/a
21	ATF2	chr3:106142417-106143189	GM12878	blood:	n/a	n/a
22	ATF2	chr3:105974264-105975156	GM12878	blood:	n/a	n/a
23	ATF2	chr3:105974243-105976569	GM12878	blood:	n/a	n/a
24	ATF2	chr3:105902447-105904534	GM12878	blood:	n/a	n/a
25	ATF2	chr3:105891496-105892138	GM12878	blood:	n/a	n/a
26	ATF2	chr3:105801986-105802427	GM12878	blood:	n/a	n/a
27	ATF2	chr3:106142097-106143148	GM12878	blood:	n/a	n/a
28	ATF2	chr3:106017814-106018736	GM12878	blood:	n/a	n/a
29	ATF2	chr3:106020875-106022101	GM12878	blood:	n/a	n/a
30	ATF2	chr3:105902550-105904465	GM12878	blood:	n/a	n/a
31	ATF3	chr3:105722966-105723337	K562	blood:	n/a	n/a
32	ATF3	chr3:105745703-105745915	K562	blood:	n/a	n/a
33	BACH1	chr3:105748890-105749016	H1-hESC	embryonic stem cell:	n/a	n/a
34	BACH1	chr3:106176287-106176393	K562	blood:	n/a	n/a
35	BACH1	chr3:105833889-105833918	K562	blood:	n/a	n/a
36	BACH1	chr3:106176254-106176502	H1-hESC	embryonic stem cell:	n/a	n/a
37	BACH1	chr3:105849406-105849860	K562	blood:	n/a	n/a
38	BACH1	chr3:106021384-106021672	H1-hESC	embryonic stem cell:	n/a	n/a
39	BATF	chr3:106055912-106056232	GM12878	blood:	n/a	chr3:106056067-106056078
40	BATF	chr3:105974673-105975544	GM12878	blood:	n/a	n/a
41	BATF	chr3:106261265-106261522	GM12878	blood:	n/a	n/a
42	BATF	chr3:106176139-106176468	GM12878	blood:	n/a	chr3:106176327-106176338
43	BATF	chr3:106051781-106052109	GM12878	blood:	n/a	chr3:106051957-106051966
44	BATF	chr3:106176162-106176454	GM12878	blood:	n/a	chr3:106176327-106176338
45	BATF	chr3:105891582-105891992	GM12878	blood:	n/a	chr3:105891837-105891847
46	BATF	chr3:106142476-106143184	GM12878	blood:	n/a	n/a
47	BATF	chr3:106051657-106052158	GM12878	blood:	n/a	chr3:106051957-106051966
48	BATF	chr3:106247810-106248117	GM12878	blood:	n/a	chr3:106247922-106247930
49	BATF	chr3:106142250-106143181	GM12878	blood:	n/a	n/a
50	BATF	chr3:106051054-106051280	GM12878	blood:	n/a	n/a

(count:550 , 50 per page) page: 1 2 3 4 5 6 7 ... 11

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr3:105839222-105839272	BE2_C	brain:	n/a
2	chr3:105839222-105839272	BE2_C	brain:	n/a
3	chr3:106116978-106117028	NHBE	bronchial:	n/a
4	chr3:105831607-105831657	HCF	heart:	n/a
5	chr3:105733168-105733218	ProgFib	skin:	n/a
6	chr3:105960717-105960767	PANC-1	pancreas:	n/a
7	chr3:105831607-105831657	HepG2	liver:	n/a
8	chr3:105839222-105839272	K562	blood:	n/a
9	chr3:106045899-106045949	LNCaP	prostate:	n/a
10	chr3:106147199-106147249	MCF10A-Er-Src	breast:	n/a
11	chr3:106147199-106147249	GM19239	blood:	n/a
12	chr3:106204767-106204817	NH-A	brain:	n/a
13	chr3:106176366-106176416	HEEpiC	esophagus:	n/a
14	chr3:106045899-106045949	IMR90	lung:	fetal
15	chr3:106204767-106204817	BJ	skin:	n/a
16	chr3:105831607-105831657	HEEpiC	esophagus:	n/a
17	chr3:105839222-105839272	HRPEpiC	eye:	n/a
18	chr3:105960717-105960767	PrEC	prostate:	n/a
19	chr3:106204767-106204817	K562	blood:	n/a
20	chr3:105733168-105733218	U87	brain:	n/a
21	chr3:105960717-105960767	HRE	kidney:	n/a
22	chr3:106116978-106117028	Hela-S3	cervix:	n/a
23	chr3:106116978-106117028	HCM	heart:	n/a
24	chr3:106204767-106204817	ovcar-3	ovarian:	n/a
25	chr3:106176366-106176416	PANC-1	pancreas:	n/a
26	chr3:106147199-106147249	LNCaP	prostate:	n/a
27	chr3:106204767-106204817	NHDF-neo	bronchial:	n/a
28	chr3:106176366-106176416	HL-60	blood:	n/a
29	chr3:105831607-105831657	A549	lung:	n/a
30	chr3:105831607-105831657	SK-N-MC	brain:	n/a
31	chr3:106176366-106176416	Hepatocyte	liver:	n/a
32	chr3:105733168-105733218	ovcar-3	ovarian:	n/a
33	chr3:105960717-105960767	AG04449	skin:	fetal
34	chr3:106204767-106204817	HepG2	liver:	n/a
35	chr3:105960717-105960767	MCF10A-Er-Src	breast:	n/a
36	chr3:105831607-105831657	MCF-7	breast:	n/a
37	chr3:105831607-105831657	SAEC	small airway:	n/a
38	chr3:106045899-106045949	HMEC	breast:	n/a
39	chr3:105831607-105831657	BJ	skin:	n/a
40	chr3:106045899-106045949	BJ	skin:	n/a
41	chr3:105960717-105960767	AG09319	gingival:	n/a
42	chr3:106204767-106204817	HRCEpiC	kidney:	n/a
43	chr3:106204767-106204817	GM06990	blood:	n/a
44	chr3:106176366-106176416	MCF10A-Er-Src	breast:	n/a
45	chr3:105960717-105960767	T-47D	breast:	n/a
46	chr3:105831607-105831657	GM06990	blood:	n/a
47	chr3:106204767-106204817	Jurkat	blood:	n/a
48	chr3:106147199-106147249	HMEC	breast:	n/a
49	chr3:105960717-105960767	MCF-7	breast:	n/a
50	chr3:105831607-105831657	MCF10A-Er-Src	breast:	n/a

(count:115 , 50 per page) page: 1 2 3

No.	Distal block	Cell Line	Cell type
1	chr3:106313000..106315115-chr3:106328772..106331411,2	MCF-7	breast:
2	chr3:106058541..106060083-chr3:106062950..106065204,2	MCF-7	breast:
3	chr3:106164691..106166438-chr3:106186833..106189674,2	MCF-7	breast:
4	chr3:105586976..105590454-chr3:105834808..105837909,5	MCF-7	breast:
5	chr3:105603078..105603677-chr3:105774410..105775125,2	MCF-7	breast:
6	chr3:106304732..106306623-chr3:106312580..106314480,2	MCF-7	breast:
7	chr3:106047719..106048625-chr6:26157506..26158419,2	Hela-S3	cervix:
8	chr3:106329609..106330150-chr3:106399676..106400270,2	MCF-7	breast:
9	chr3:106186900..106189565-chr3:106191433..106194226,2	MCF-7	breast:
10	chr3:105884642..105887122-chr3:105902947..105905518,2	MCF-7	breast:
11	chr3:106052542..106055477-chr3:106055558..106057110,2	MCF-7	breast:
12	chr3:106018720..106021659-chr3:106023659..106025644,2	MCF-7	breast:
13	chr3:105874261..105876624-chr3:105876895..105879680,3	MCF-7	breast:
14	chr3:105722394..105725041-chr3:105732379..105734444,2	MCF-7	breast:
15	chr3:105801744..105803970-chr3:105851006..105853330,2	MCF-7	breast:
16	chr3:105995923..105998660-chr3:106001692..106003580,2	MCF-7	breast:
17	chr3:105716890..105719921-chr3:105720990..105723304,3	K562	blood:
18	chr3:106058541..106060083-chr3:106062950..106065204,2	MCF-7	breast:
19	chr3:105716890..105720340-chr3:105720990..105724271,4	K562	blood:
20	chr1:187672225..187673726-chr3:105922087..105923600,2	MCF-7	breast:
21	chr3:105716218..105718448-chr3:105721913..105723438,2	MCF-7	breast:
22	chr3:106166454..106167048-chr3:106174727..106175656,2	MCF-7	breast:
23	chr3:105843577..105846046-chr3:105847712..105849257,2	MCF-7	breast:
24	chr3:106270707..106272385-chr3:106275009..106277664,2	MCF-7	breast:
25	chr3:106315796..106317621-chr3:106319777..106322488,2	MCF-7	breast:
26	chr3:105928970..105930853-chr3:105939780..105941554,2	K562	blood:
27	chr3:106277689..106279756-chr3:106279983..106282621,2	MCF-7	breast:
28	chr3:105404856..105405756-chr3:105840513..105841376,2	MCF-7	breast:
29	chr3:105995923..105998660-chr3:106001692..106003580,2	MCF-7	breast:
30	chr3:106159111..106160696-chr3:106162064..106164433,2	MCF-7	breast:
31	chr3:106291503..106294370-chr3:106296487..106298568,3	MCF-7	breast:
32	chr3:105904856..105907247-chr3:105909477..105911619,2	K562	blood:
33	chr3:106302619..106305124-chr3:106305223..106307557,2	MCF-7	breast:
34	chr3:105993523..105995070-chr3:105995431..105997328,2	MCF-7	breast:
35	chr3:105724718..105727250-chr3:105727587..105729299,2	MCF-7	breast:
36	chr3:105404904..105405760-chr3:106328270..106329152,3	MCF-7	breast:
37	chr3:106018720..106021659-chr3:106023659..106025644,2	MCF-7	breast:
38	chr3:105904856..105907247-chr3:105909477..105911619,2	K562	blood:
39	chr3:105586195..105588257-chr3:106327477..106330466,2	MCF-7	breast:
40	chr3:105716890..105720340-chr3:105720990..105724271,4	K562	blood:
41	chr3:106085659..106088454-chr3:106091584..106093957,2	MCF-7	breast:
42	chr3:105879487..105881995-chr3:105889163..105891300,2	K562	blood:
43	chr3:105884642..105887122-chr3:105902947..105905518,2	MCF-7	breast:
44	chr3:105889901..105892774-chr3:105909285..105910974,2	MCF-7	breast:
45	chr3:106045146..106047029-chr3:106048387..106050311,2	K562	blood:
46	chr3:106291348..106293795-chr3:106324472..106326984,2	MCF-7	breast:
47	chr3:105722394..105725041-chr3:105732379..105734444,2	MCF-7	breast:
48	chr3:105786379..105788670-chr3:105804052..105805702,2	MCF-7	breast:
49	chr3:105907275..105909533-chr3:105911519..105914134,2	K562	blood:
50	chr3:106186900..106189565-chr3:106191433..106194226,2	MCF-7	breast:

(count:64 , 50 per page) page: 1 2

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-CBLB-9	chr3:105971875-105971915	NONHSAT090975
2	lnc-CBLB-3	chr3:106098358-106098477	NONHSAT090983
3	lnc-CBLB-3	chr3:106142196-106142243	XLOC_003199
4	lnc-CBLB-3	chr3:106096990-106097199	NONHSAT090983
5	lnc-CBLB-3	chr3:106142196-106142233	NONHSAT090983
6	lnc-CBLB-3	chr3:106142196-106142243	XLOC_003199
7	lnc-CBLB-3	chr3:106146751-106146799	XLOC_003199
8	lnc-CBLB-3	chr3:106143742-106143888	XLOC_003199
9	lnc-ALCAM-8	chr3:105912567-105913564	NONHSAT090974
10	lnc-CBLB-3	chr3:106103458-106103570	XLOC_003199
11	lnc-CBLB-9	chr3:105927930-105927960	NONHSAT090975
12	lnc-CBLB-3	chr3:106136381-106136556	NONHSAT090983
13	lnc-CBLB-9	chr3:105932989-105933176	NONHSAT090975
14	lnc-CBLB-3	chr3:106146751-106146799	XLOC_003199
15	lnc-CBLB-3	chr3:106142196-106142243	XLOC_003199
16	lnc-CBLB-9	chr3:105908037-105908255	NONHSAT090975
17	lnc-CBLB-3	chr3:106143742-106143888	XLOC_003199
18	lnc-CBLB-3	chr3:106103458-106103570	XLOC_003199
19	lnc-CBLB-3	chr3:106136381-106136600	XLOC_003199
20	lnc-CBLB-3	chr3:106133347-106133436	NONHSAT090984
21	lnc-CBLB-3	chr3:106104497-106104733	NONHSAT090984
22	lnc-CBLB-3	chr3:106146751-106146792	XLOC_003199
23	lnc-ALCAM-8	chr3:105897346-105897395	NONHSAT090974
24	lnc-CBLB-3	chr3:106104497-106104733	XLOC_003199
25	lnc-CBLB-3	chr3:106133347-106133436	XLOC_003199
26	lnc-CBLB-10	chr3:105992408-105992737	NONHSAT090976
27	lnc-CBLB-3	chr3:106136381-106136556	XLOC_003199
28	lnc-CBLB-3	chr3:106142196-106142243	XLOC_003199
29	lnc-CBLB-9	chr3:105922760-105922914	NONHSAT090975
30	lnc-CBLB-3	chr3:106133347-106133436	XLOC_003199
31	lnc-CBLB-3	chr3:106103458-106103570	XLOC_003199
32	lnc-CBLB-3	chr3:106146751-106146792	XLOC_003199
33	lnc-ALCAM-9	chr3:106146912-106148951	NONHSAT090986
34	lnc-CBLB-3	chr3:106142196-106142224	NONHSAT090984
35	lnc-CBLB-3	chr3:106143742-106143888	XLOC_003199
36	lnc-CBLB-8	chr3:105803221-105803816	NONHSAT090973
37	lnc-CBLB-3	chr3:106096990-106097199	NONHSAT090984
38	lnc-CBLB-3	chr3:106103458-106103570	NONHSAT090983
39	lnc-CBLB-3	chr3:106136381-106136600	XLOC_003199
40	lnc-CBLB-3	chr3:106096979-106097199	XLOC_003199
41	lnc-CBLB-3	chr3:106104497-106104733	NONHSAT090983
42	lnc-CBLB-3	chr3:106146751-106146799	XLOC_003199
43	lnc-CBLB-3	chr3:106104497-106104733	XLOC_003199
44	lnc-CBLB-9	chr3:105906068-105907371	NONHSAT090975
45	lnc-CBLB-3	chr3:106103458-106103570	NONHSAT090984
46	lnc-CBLB-3	chr3:106103458-106103570	XLOC_003199
47	lnc-CBLB-3	chr3:106143742-106143888	XLOC_003199
48	lnc-CBLB-3	chr3:106142136-106142243	XLOC_003199
49	lnc-CBLB-3	chr3:106086838-106087063	XLOC_003199
50	lnc-CBLB-3	chr3:106086841-106087063	XLOC_003199

No data

Variant related genes	Relation type
ENSG00000200610	TF binding region
ENSG00000244652	TF binding region
ENSG00000200610	CpG island
ENSG00000244652	CpG island
ENSG00000114423	chromatin interactions
ENSG00000158373	chromatin interactions
PRKAA2	miRNA target sites
PRKAA1	miRNA target sites
PRKAB2	miRNA target sites

Extended variants
information (count: 20104 )
Associated
traits (count: 64 )

Variant overlapped rSNPs/rCNVs (count:20104 , 50 per page) page: 1 2 3 4 5 6 7 ... 403

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs181508165	chr3:105718756-105718757	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs540957900	chr3:105718788-105718789	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs562261884	chr3:105718827-105718828	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs573242074	chr3:105718840-105718841	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs115918168	chr3:105718843-105718844	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs374365348	chr3:105718872-105718873	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs563061502	chr3:105718883-105718884	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs2655036	chr3:105718886-105718887	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs533509836	chr3:105718934-105718935	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs551560923	chr3:105718940-105718941	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs115323465	chr3:105718964-105718965	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs377115814	chr3:105718986-105718987	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs66513749	chr3:105718987-105718988	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs71111398	chr3:105719011-105719012	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs527699464	chr3:105719047-105719048	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs549329568	chr3:105719051-105719052	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs114561802	chr3:105719056-105719057	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs574026171	chr3:105719080-105719081	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs377269627	chr3:105719124-105719125	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs544477843	chr3:105719149-105719150	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs150743417	chr3:105719156-105719157	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs79131634	chr3:105719157-105719158	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs538755161	chr3:105719167-105719168	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs553571901	chr3:105719172-105719173	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs572074800	chr3:105719228-105719229	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs532776407	chr3:105719237-105719238	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs139113293	chr3:105719241-105719242	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs531441521	chr3:105719246-105719247	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs184540608	chr3:105719258-105719259	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs201663493	chr3:105719275-105719276	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs143978563	chr3:105719280-105719281	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs551311443	chr3:105719303-105719304	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs372493846	chr3:105719314-105719315	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs563100942	chr3:105719331-105719332	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs115855308	chr3:105719394-105719395	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs189446298	chr3:105719403-105719404	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs527346584	chr3:105719449-105719450	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs368701840	chr3:105719455-105719456	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs145945638	chr3:105719500-105719501	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs527737802	chr3:105719560-105719561	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs139952495	chr3:105719562-105719563	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs77630275	chr3:105719632-105719633	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs560937537	chr3:105719639-105719640	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs531546863	chr3:105719666-105719667	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs549644634	chr3:105719673-105719674	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs182042688	chr3:105719684-105719685	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs538472839	chr3:105719714-105719715	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs547543943	chr3:105719715-105719716	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs553351041	chr3:105719771-105719772	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs567447102	chr3:105719781-105719782	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:64)

Disease	PMID	Source
Basal cell lymphoma	17053054	CNVD
Esophageal cancer	21851588	CNVD
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Retinoblastoma	21504564	CNVD
Medulloblastoma	21979893	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Lung cancer	18438408	CNVD
Hirschsprung''s Disease	21712996	CNVD
Hepatocellular carcinoma	16750200	CNVD
Cancer	21183584	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Bipolar disorder	20877625	CNVD
Bipolar disorder	21956041	CNVD
Bipolar disorder	22241247	CNVD
Biliary cancer	18923514	CNVD
Prostate cancer	21965145	CNVD
Cancer	21129771	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Cervical cancer	21062161	CNVD
Squamous cell cancer	20885788	CNVD
Melanoma	18172304	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Bipolar disorder	18458673	CNVD
Breast cancer	22032731	CNVD
Neurodevelopmental disorder	22521361	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Breast cancer	16461572	CNVD
Neuroblastoma	17533364	CNVD
microdeletion syndrome	22180640	CNVD
Cervical Cancer	21857958	CNVD
Melanoma	21693616	CNVD
Lung cancer	21426551	CNVD
Cancer	21637783	CNVD
Cervical cancer	21063398	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Liposarcoma	21253554	CNVD
Oral cancer	21386901	CNVD
Renal cell carcinoma	19461508	CNVD
Cancer	22065749	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	16608533	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Renal cell carcinoma	18765545	CNVD
Developmental delay	22180640	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Myelofibrosis	22110671	CNVD
T-cell acute lymphoblastic leukemia	19406988	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Bipolar disorder	19114987	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Non-syndromic sensorineural hearing loss	19587683	CNVD
Congenital anomalies of the kidney and urinary tract	18316590	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
early-passage human iPS cells	21368824	CNVD

Chromatin state (count:2744 , 50 per page) page: 1 2 3 4 5 6 7 ... 55

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:105717400-105722800	Weak transcription	HSMM	muscle
2	chr3:105717400-105725000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
3	chr3:105717600-105722400	Weak transcription	Osteobl	bone
4	chr3:105717600-105722600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
5	chr3:105717600-105725000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
6	chr3:105717800-105721600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
7	chr3:105717800-105722600	Weak transcription	Muscle Satellite Cultured Cells	--
8	chr3:105718000-105720000	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
9	chr3:105718000-105722400	Weak transcription	Hela-S3	cervix
10	chr3:105718000-105722400	Weak transcription	NH-A	brain
11	chr3:105718200-105719000	Enhancers	K562	blood
12	chr3:105718200-105722600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
13	chr3:105718400-105729200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
14	chr3:105719000-105721600	Weak transcription	K562	blood
15	chr3:105720000-105724800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
16	chr3:105721600-105721800	Enhancers	K562	blood
17	chr3:105721600-105722400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
18	chr3:105721600-105723000	Enhancers	NHDF-Ad	bronchial
19	chr3:105721800-105722400	Weak transcription	K562	blood
20	chr3:105722000-105722200	Enhancers	Aorta	Aorta
21	chr3:105722400-105722600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
22	chr3:105722400-105722600	Enhancers	K562	blood
23	chr3:105722400-105722800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
24	chr3:105722400-105722800	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
25	chr3:105722400-105722800	Enhancers	NH-A	brain
26	chr3:105722400-105723000	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
27	chr3:105722400-105723000	Enhancers	Hela-S3	cervix
28	chr3:105722400-105723000	Enhancers	Osteobl	bone
29	chr3:105722400-105723200	Enhancers	Primary T helper cells PMA-I stimulated	--
30	chr3:105722400-105724200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
31	chr3:105722600-105722800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
32	chr3:105722600-105722800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
33	chr3:105722600-105722800	Enhancers	Muscle Satellite Cultured Cells	--
34	chr3:105722600-105722800	Enhancers	NHEK	skin
35	chr3:105722600-105723000	Weak transcription	K562	blood
36	chr3:105722600-105725000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
37	chr3:105722800-105723000	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
38	chr3:105722800-105723000	Active TSS	Primary T helper memory cells from peripheral blood 2	blood
39	chr3:105722800-105723000	Enhancers	HSMM	muscle
40	chr3:105722800-105723000	Flanking Active TSS	NHEK	skin
41	chr3:105722800-105723400	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
42	chr3:105722800-105723400	Active TSS	Duodenum Mucosa	Duodenum
43	chr3:105722800-105723400	Active TSS	Pancreatic Islets	Pancreatic Islet
44	chr3:105722800-105723400	Active TSS	HSMMtube	muscle
45	chr3:105722800-105723400	Active TSS	NHLF	lung
46	chr3:105722800-105723600	Active TSS	Adipose Nuclei	Adipose
47	chr3:105722800-105723600	Active TSS	Fetal Brain Male	brain
48	chr3:105722800-105723600	Active TSS	Right Atrium	heart
49	chr3:105722800-105723600	Flanking Active TSS	NH-A	brain
50	chr3:105722800-105723800	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow

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