Variant report

Variant	nsv536687
Chromosome Location	chr3:110158316-110431113
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1356)
CpG islands
(count:673)
Chromatin interactive
region (count:63)
LncRNA
region (count:4)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1356 , 50 per page) page: 1 2 3 4 5 6 7 ... 28

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr3:110239851-110240334	K562	blood:	n/a	n/a
2	ARID3A	chr3:110339011-110339287	K562	blood:	n/a	n/a
3	ARID3A	chr3:110229389-110229704	K562	blood:	n/a	n/a
4	ARID3A	chr3:110222947-110224194	K562	blood:	n/a	n/a
5	ARID3A	chr3:110235328-110235528	K562	blood:	n/a	n/a
6	ARID3A	chr3:110344280-110344634	K562	blood:	n/a	n/a
7	ARID3A	chr3:110247380-110248084	K562	blood:	n/a	n/a
8	ARID3A	chr3:110269356-110270029	K562	blood:	n/a	n/a
9	ATF1	chr3:110223647-110224062	K562	blood:	n/a	n/a
10	ATF1	chr3:110239924-110240245	K562	blood:	n/a	n/a
11	ATF2	chr3:110430615-110431161	H1-hESC	embryonic stem cell:	n/a	n/a
12	ATF2	chr3:110295750-110296207	H1-hESC	embryonic stem cell:	n/a	n/a
13	ATF2	chr3:110430649-110431131	H1-hESC	embryonic stem cell:	n/a	n/a
14	ATF3	chr3:110223684-110224032	K562	blood:	n/a	n/a
15	ATF3	chr3:110302100-110302850	A549	lung:	n/a	n/a
16	ATF3	chr3:110295700-110296333	A549	lung:	n/a	n/a
17	ATF3	chr3:110186797-110187048	K562	blood:	n/a	n/a
18	ATF3	chr3:110239853-110240234	K562	blood:	n/a	n/a
19	ATF3	chr3:110344405-110344569	K562	blood:	n/a	n/a
20	ATF3	chr3:110245673-110245815	K562	blood:	n/a	n/a
21	ATF3	chr3:110245606-110245939	K562	blood:	n/a	n/a
22	ATF3	chr3:110302207-110302904	A549	lung:	n/a	n/a
23	BACH1	chr3:110373934-110373954	H1-hESC	embryonic stem cell:	n/a	n/a
24	BACH1	chr3:110310093-110310161	K562	blood:	n/a	n/a
25	BACH1	chr3:110295457-110296326	H1-hESC	embryonic stem cell:	n/a	n/a
26	BACH1	chr3:110239948-110240284	K562	blood:	n/a	n/a
27	BATF	chr3:110345477-110345909	GM12878	blood:	n/a	chr3:110345613-110345623
28	BATF	chr3:110287191-110287395	GM12878	blood:	n/a	n/a
29	BCL11A	chr3:110295827-110296106	H1-hESC	embryonic stem cell:	n/a	n/a
30	BCL11A	chr3:110302104-110302404	H1-hESC	embryonic stem cell:	n/a	n/a
31	BCL11A	chr3:110317738-110318028	H1-hESC	embryonic stem cell:	n/a	n/a
32	BCL11A	chr3:110302187-110302409	H1-hESC	embryonic stem cell:	n/a	n/a
33	BCL11A	chr3:110430733-110430982	H1-hESC	embryonic stem cell:	n/a	n/a
34	BCL11A	chr3:110430736-110430988	H1-hESC	embryonic stem cell:	n/a	n/a
35	BCL11A	chr3:110295758-110296109	H1-hESC	embryonic stem cell:	n/a	n/a
36	BCL3	chr3:110301985-110302982	A549	lung:	n/a	n/a
37	BCL3	chr3:110295630-110296266	A549	lung:	n/a	n/a
38	BCL3	chr3:110295569-110296350	A549	lung:	n/a	n/a
39	BHLHE40	chr3:110344340-110344672	K562	blood:	n/a	n/a
40	BHLHE40	chr3:110242580-110242784	K562	blood:	n/a	n/a
41	BHLHE40	chr3:110239814-110240283	K562	blood:	n/a	n/a
42	BHLHE40	chr3:110223596-110224181	K562	blood:	n/a	n/a
43	BRCA1	chr3:110404988-110405130	H1-hESC	embryonic stem cell:	n/a	n/a
44	BRCA1	chr3:110245710-110246410	Hela-S3	cervix:	n/a	n/a
45	CBX3	chr3:110286966-110287682	HCT-116	colon:	n/a	n/a
46	CBX3	chr3:110206608-110207129	HCT-116	colon:	n/a	n/a
47	CBX3	chr3:110245504-110246008	HCT-116	colon:	n/a	n/a
48	CBX3	chr3:110206753-110206968	K562	blood:	n/a	n/a
49	CBX3	chr3:110286951-110287606	HCT-116	colon:	n/a	n/a
50	CBX3	chr3:110239876-110240224	K562	blood:	n/a	n/a

(count:673 , 50 per page) page: 1 2 3 4 5 6 7 ... 14

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr3:110376551-110376601	HRPEpiC	eye:	n/a
2	chr3:110363228-110363278	SAEC	small airway:	n/a
3	chr3:110376551-110376601	HRPEpiC	eye:	n/a
4	chr3:110363228-110363278	SAEC	small airway:	n/a
5	chr3:110248442-110248492	T-47D	breast:	n/a
6	chr3:110363228-110363278	K562	blood:	n/a
7	chr3:110248442-110248492	SK-N-SH	brain:	n/a
8	chr3:110363228-110363278	NT2-D1	testis:	n/a
9	chr3:110376551-110376601	HCPEpiC	choroid plexus:	n/a
10	chr3:110363281-110363331	HNPCEpiC	eye:	n/a
11	chr3:110246985-110247035	HCPEpiC	choroid plexus:	n/a
12	chr3:110248442-110248492	HIPEpiC	eye:	n/a
13	chr3:110363281-110363331	NHBE	bronchial:	n/a
14	chr3:110303472-110303522	NT2-D1	testis:	n/a
15	chr3:110159202-110159252	NB4	blood:	n/a
16	chr3:110240891-110240941	AG09319	gingival:	n/a
17	chr3:110344165-110344215	SK-N-SH_RA	brain:	n/a
18	chr3:110159202-110159252	AG04449	skin:	fetal
19	chr3:110363228-110363278	Jurkat	blood:	n/a
20	chr3:110246985-110247035	NHDF-neo	bronchial:	n/a
21	chr3:110250679-110250729	MCF-7	breast:	n/a
22	chr3:110303472-110303522	IMR90	lung:	fetal
23	chr3:110240891-110240941	SKMC	muscle:	n/a
24	chr3:110363281-110363331	NH-A	brain:	n/a
25	chr3:110240891-110240941	RPTEC	kidney:	n/a
26	chr3:110344165-110344215	HCM	heart:	n/a
27	chr3:110159202-110159252	PFSK-1	brain:	n/a
28	chr3:110248442-110248492	HCT-116	colon:	n/a
29	chr3:110250679-110250729	H1-hESC	embryonic stem cell:	embryo
30	chr3:110363228-110363278	T-47D	breast:	n/a
31	chr3:110159202-110159252	Caco-2	colon:	n/a
32	chr3:110240891-110240941	HPAEpiC	pulmonary alveolar:	n/a
33	chr3:110240891-110240941	SK-N-SH_RA	brain:	n/a
34	chr3:110303472-110303522	HL-60	blood:	n/a
35	chr3:110363281-110363331	Jurkat	blood:	n/a
36	chr3:110240891-110240941	BE2_C	brain:	n/a
37	chr3:110376551-110376601	ovcar-3	ovarian:	n/a
38	chr3:110363281-110363331	AG10803	skin:	n/a
39	chr3:110363222-110363272	RPTEC	kidney:	n/a
40	chr3:110344165-110344215	AG04450	lung:	fetal
41	chr3:110363222-110363272	H1-hESC	embryonic stem cell:	embryo
42	chr3:110344165-110344215	LNCaP	prostate:	n/a
43	chr3:110363222-110363272	NB4	blood:	n/a
44	chr3:110240891-110240941	CMK	blood:	n/a
45	chr3:110246985-110247035	A549	lung:	n/a
46	chr3:110240891-110240941	ovcar-3	ovarian:	n/a
47	chr3:110246985-110247035	IMR90	lung:	fetal
48	chr3:110303472-110303522	ProgFib	skin:	n/a
49	chr3:110248442-110248492	PrEC	prostate:	n/a
50	chr3:110250679-110250729	CMK	blood:	n/a

(count:63 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr3:110256128..110258374-chr3:110259929..110261455,2	K562	blood:
2	chr3:110279243..110282023-chr3:110283429..110285882,2	K562	blood:
3	chr3:110200269..110202547-chr3:110206926..110209174,2	K562	blood:
4	chr3:110240019..110241918-chr3:110243471..110245418,2	K562	blood:
5	chr3:110202579..110205350-chr3:110208750..110211546,2	K562	blood:
6	chr3:110222894..110225675-chr3:110240158..110242098,2	K562	blood:
7	chr3:110232263..110233795-chr3:110237768..110239573,2	K562	blood:
8	chr3:110245688..110247478-chr3:110251852..110254191,2	K562	blood:
9	chr3:110175281..110177877-chr3:110179884..110181933,2	K562	blood:
10	chr3:110337784..110340050-chr3:110340181..110342150,2	MCF-7	breast:
11	chr3:110222894..110225675-chr3:110240158..110242098,2	K562	blood:
12	chr3:110245688..110247478-chr3:110251852..110254191,2	K562	blood:
13	chr3:110282414..110285256-chr3:110286686..110288676,2	K562	blood:
14	chr3:110235029..110237272-chr3:110238334..110239946,2	K562	blood:
15	chr3:110232519..110235271-chr3:110279973..110282638,2	K562	blood:
16	chr3:110256128..110258374-chr3:110259929..110261455,2	K562	blood:
17	chr3:110240019..110241918-chr3:110243471..110245418,2	K562	blood:
18	chr3:110226107..110231031-chr3:110235797..110240409,5	K562	blood:
19	chr3:110361104..110363034-chr3:110366368..110368463,2	MCF-7	breast:
20	chr3:110405694..110407709-chr3:110411526..110413966,2	K562	blood:
21	chr3:110223100..110226514-chr3:110228942..110230704,3	K562	blood:
22	chr3:110361104..110363034-chr3:110366368..110368463,2	MCF-7	breast:
23	chr3:110195963..110198828-chr3:110223194..110225023,2	K562	blood:
24	chr3:110224350..110227035-chr3:110267483..110270332,2	K562	blood:
25	chr3:110200642..110202242-chr3:110202385..110205296,2	K562	blood:
26	chr3:110269319..110271663-chr3:110272777..110274394,2	K562	blood:
27	chr3:110276449..110278320-chr3:110281402..110283554,3	K562	blood:
28	chr3:110234753..110236641-chr3:110241075..110242689,2	K562	blood:
29	chr3:110181992..110184815-chr3:110198027..110199804,2	K562	blood:
30	chr3:110175281..110177877-chr3:110179884..110181933,2	K562	blood:
31	chr3:110337784..110340050-chr3:110340181..110342150,2	MCF-7	breast:
32	chr3:110232519..110235271-chr3:110279973..110282638,2	K562	blood:
33	chr3:110223795..110225407-chr3:110236340..110238461,2	K562	blood:
34	chr3:110223081..110225312-chr3:110255969..110257984,2	K562	blood:
35	chr3:110223081..110225312-chr3:110255969..110257984,2	K562	blood:
36	chr3:110223100..110226514-chr3:110228942..110230704,3	K562	blood:
37	chr3:110276449..110278320-chr3:110281402..110283554,3	K562	blood:
38	chr3:110223795..110225407-chr3:110236340..110238461,2	K562	blood:
39	chr3:110228265..110231031-chr3:110237827..110239739,2	K562	blood:
40	chr3:110234753..110236641-chr3:110241075..110242689,2	K562	blood:
41	chr3:110248230..110250752-chr3:110252528..110254988,2	K562	blood:
42	chr3:110235029..110237272-chr3:110238334..110239946,2	K562	blood:
43	chr3:110240671..110243637-chr3:110277371..110279265,2	K562	blood:
44	chr3:110279243..110282023-chr3:110283429..110285882,2	K562	blood:
45	chr3:110200269..110202547-chr3:110206926..110209174,2	K562	blood:
46	chr3:110148648..110150242-chr3:110157242..110158931,2	MCF-7	breast:
47	chr3:110224350..110227035-chr3:110267483..110270332,2	K562	blood:
48	chr3:110200642..110202242-chr3:110202385..110205296,2	K562	blood:
49	chr3:110240671..110243637-chr3:110277371..110279265,2	K562	blood:
50	chr3:110233003..110234859-chr3:110246795..110249588,2	K562	blood:

(count:4 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-RP11-553A10.1.1-2	chr3:110247508-110247602	XLOC_003212
2	lnc-RP11-553A10.1.1-2	chr3:110246329-110246613	XLOC_003212
3	lnc-RP11-553A10.1.1-2	chr3:110248177-110248429	XLOC_003212
4	lnc-RP11-553A10.1.1-2	chr3:110247848-110248015	XLOC_003212

No data

Variant related genes	Relation type
ENSG00000244722	TF binding region
ENSG00000240895	TF binding region
RNU6ATAC15P	TF binding region
ENSG00000244722	CpG island
ENSG00000240895	CpG island
RNU6ATAC15P	CpG island
ENSG00000221206	chromatin interactions
ENSG00000240895	chromatin interactions
ENSG00000113648	chromatin interactions

Extended variants
information (count: 7155 )
Associated
traits (count: 63 )

Variant overlapped rSNPs/rCNVs (count:7155 , 50 per page) page: 1 2 3 4 5 6 7 ... 144

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs534322009	chr3:110158415-110158416	Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs189513944	chr3:110158432-110158433	Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs545140052	chr3:110158433-110158434	Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs57509690	chr3:110158435-110158436	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
5	rs143426407	chr3:110158460-110158461	Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs193042890	chr3:110158466-110158467	Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs148071082	chr3:110158480-110158481	Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs184925532	chr3:110158481-110158482	Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs368103766	chr3:110158499-110158500	Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs72937206	chr3:110158502-110158503	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
11	rs188909473	chr3:110158524-110158525	Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs181554076	chr3:110158527-110158528	Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs574098244	chr3:110158549-110158550	Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs186263655	chr3:110158586-110158587	Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs58939217	chr3:110158589-110158590	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
16	rs189475503	chr3:110158591-110158592	Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs552063069	chr3:110158626-110158627	Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs181527056	chr3:110158667-110158668	Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs543646614	chr3:110158693-110158694	Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs527751607	chr3:110158824-110158825	Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs547930087	chr3:110158865-110158866	Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs567614779	chr3:110158880-110158881	Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs536653417	chr3:110158929-110158930	Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs148068997	chr3:110158932-110158933	Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs564984354	chr3:110158933-110158934	Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs570232709	chr3:110158947-110158948	Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs539355362	chr3:110158948-110158949	Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs558852947	chr3:110158952-110158953	Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs11919123	chr3:110158954-110158955	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
30	rs185849991	chr3:110158957-110158958	Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs9851821	chr3:110158963-110158964	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
32	rs138660431	chr3:110158970-110158971	Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs543011804	chr3:110158983-110158984	Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs141701607	chr3:110158987-110158988	Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs146333848	chr3:110158995-110158996	Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs546093833	chr3:110159005-110159006	Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
37	rs191047803	chr3:110159035-110159036	Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
38	rs529669180	chr3:110159040-110159041	Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
39	rs547865151	chr3:110159041-110159042	Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
40	rs569773513	chr3:110159047-110159048	Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
41	rs528294938	chr3:110159071-110159072	Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
42	rs541494051	chr3:110159089-110159090	Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
43	rs138284828	chr3:110159090-110159091	Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
44	rs530262349	chr3:110159094-110159095	Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
45	rs538052479	chr3:110159104-110159105	Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
46	rs549893148	chr3:110159105-110159106	Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
47	rs149571561	chr3:110159109-110159110	Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
48	rs556721620	chr3:110159149-110159150	Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
49	rs4407426	chr3:110159186-110159187	Enhancers Flanking Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
50	rs552838924	chr3:110159188-110159189	Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:63)

Disease	PMID	Source
Basal cell lymphoma	17053054	CNVD
Esophageal cancer	21851588	CNVD
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Retinoblastoma	21504564	CNVD
Medulloblastoma	21979893	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Lung cancer	18438408	CNVD
Hirschsprung''s Disease	21712996	CNVD
Hepatocellular carcinoma	16750200	CNVD
Cancer	21183584	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Bipolar disorder	20877625	CNVD
Bipolar disorder	21956041	CNVD
Bipolar disorder	22241247	CNVD
Biliary cancer	18923514	CNVD
Prostate cancer	21965145	CNVD
Cancer	21129771	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Cervical cancer	21062161	CNVD
Squamous cell cancer	20885788	CNVD
Melanoma	18172304	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Bipolar disorder	18458673	CNVD
Breast cancer	22032731	CNVD
Neurodevelopmental disorder	22521361	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Breast cancer	16461572	CNVD
Neuroblastoma	17533364	CNVD
microdeletion syndrome	22180640	CNVD
Cervical Cancer	21857958	CNVD
Melanoma	21693616	CNVD
Lung cancer	21426551	CNVD
Cancer	21637783	CNVD
Cervical cancer	21063398	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Liposarcoma	21253554	CNVD
Oral cancer	21386901	CNVD
Renal cell carcinoma	19461508	CNVD
Cancer	22065749	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	16608533	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Renal cell carcinoma	18765545	CNVD
Developmental delay	22180640	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21858162	CNVD
Multiple myeloma	17550852	CNVD
Ductal carcinoma	22052326	CNVD
small cell lung cancer	20016488	CNVD
Myelofibrosis	22110671	CNVD
Basal cell lymphoma	21115979	CNVD
Rett syndrome	21593744	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Non-syndromic sensorineural hearing loss	19587683	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:958 , 50 per page) page: 1 2 3 4 5 6 7 ... 20

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:110158400-110159400	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr3:110159000-110159200	Flanking Active TSS	H9 Cell Line	embryonic stem cell
3	chr3:110159200-110159400	Active TSS	H9 Cell Line	embryonic stem cell
4	chr3:110178000-110178400	Enhancers	Fetal Heart	heart
5	chr3:110178000-110178400	Enhancers	HSMMtube	muscle
6	chr3:110180200-110180800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
7	chr3:110181000-110181200	Enhancers	Gastric	stomach
8	chr3:110182000-110182200	Enhancers	Gastric	stomach
9	chr3:110182000-110183400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
10	chr3:110183200-110183400	Enhancers	Rectal Mucosa Donor 31	rectum
11	chr3:110184600-110185000	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
12	chr3:110184600-110185200	Enhancers	H1 Cell Line	embryonic stem cell
13	chr3:110184600-110185200	Enhancers	HUES48 Cell Line	embryonic stem cell
14	chr3:110184600-110185400	Enhancers	ES-I3 Cell Line	embryonic stem cell
15	chr3:110184800-110185000	Enhancers	iPS-20b Cell Line	embryonic stem cell
16	chr3:110184800-110185200	Enhancers	Fetal Lung	lung
17	chr3:110184800-110185400	Enhancers	HUES6 Cell Line	embryonic stem cell
18	chr3:110184800-110185800	Enhancers	NHDF-Ad	bronchial
19	chr3:110185000-110185400	Enhancers	iPS-18 Cell Line	embryonic stem cell
20	chr3:110185600-110185800	Enhancers	iPS-20b Cell Line	embryonic stem cell
21	chr3:110190600-110191600	Weak transcription	Rectal Mucosa Donor 31	rectum
22	chr3:110191600-110191800	Enhancers	Rectal Mucosa Donor 31	rectum
23	chr3:110191800-110192200	Flanking Active TSS	Rectal Mucosa Donor 31	rectum
24	chr3:110191800-110192600	Enhancers	Fetal Intestine Small	intestine
25	chr3:110192200-110193000	Enhancers	Rectal Mucosa Donor 31	rectum
26	chr3:110193400-110193600	Enhancers	Aorta	Aorta
27	chr3:110195200-110195600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
28	chr3:110195200-110195800	Enhancers	Breast Myoepithelial Primary Cells	Breast
29	chr3:110195800-110196400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
30	chr3:110196400-110196600	Enhancers	Breast Myoepithelial Primary Cells	Breast
31	chr3:110197000-110197800	Enhancers	Muscle Satellite Cultured Cells	--
32	chr3:110197000-110197800	Enhancers	Pancreatic Islets	Pancreatic Islet
33	chr3:110197200-110197400	Enhancers	A549	lung
34	chr3:110197400-110197800	Flanking Active TSS	A549	lung
35	chr3:110198600-110199000	Enhancers	Fetal Heart	heart
36	chr3:110198600-110199200	Enhancers	Fetal Intestine Large	intestine
37	chr3:110198600-110199200	Enhancers	Fetal Intestine Small	intestine
38	chr3:110204000-110204800	Enhancers	Muscle Satellite Cultured Cells	--
39	chr3:110205400-110206600	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
40	chr3:110206000-110206600	ZNF genes & repeats	H1 Cell Line	embryonic stem cell
41	chr3:110206200-110208200	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
42	chr3:110208200-110208800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
43	chr3:110208800-110209200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
44	chr3:110209200-110211400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
45	chr3:110209800-110211000	Enhancers	iPS-18 Cell Line	embryonic stem cell
46	chr3:110210000-110210600	Enhancers	H1 Cell Line	embryonic stem cell
47	chr3:110210000-110210800	Enhancers	iPS-15b Cell Line	embryonic stem cell
48	chr3:110210000-110211000	Enhancers	HUES48 Cell Line	embryonic stem cell
49	chr3:110210000-110211000	Enhancers	HUES64 Cell Line	embryonic stem cell
50	chr3:110210200-110210400	Enhancers	Pancreatic Islets	Pancreatic Islet

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links