Variant report

Variant	nsv537035
Chromosome Location	chr4:10103058-10297561
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:3859)
CpG islands
(count:1773)
Chromatin interactive
region (count:344)
LncRNA
region (count:10)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:3859 , 50 per page) page: 1 2 3 4 5 6 7 ... 78

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr4:10241023-10241142	K562	blood:	n/a	n/a
2	ARID3A	chr4:10286746-10287065	K562	blood:	n/a	n/a
3	ARID3A	chr4:10171356-10172376	K562	blood:	n/a	n/a
4	ARID3A	chr4:10119476-10119692	K562	blood:	n/a	n/a
5	ARID3A	chr4:10172580-10173201	K562	blood:	n/a	n/a
6	ARID3A	chr4:10188308-10188961	K562	blood:	n/a	n/a
7	ARID3A	chr4:10174858-10175646	K562	blood:	n/a	n/a
8	ARID3A	chr4:10185222-10185607	K562	blood:	n/a	chr4:10185454-10185470
9	ARID3A	chr4:10125192-10125592	HepG2	liver:	n/a	n/a
10	ARID3A	chr4:10118681-10118881	HepG2	liver:	n/a	n/a
11	ARID3A	chr4:10108260-10108548	K562	blood:	n/a	n/a
12	ARID3A	chr4:10182036-10184108	K562	blood:	n/a	n/a
13	ARID3A	chr4:10175936-10176225	K562	blood:	n/a	n/a
14	ARID3A	chr4:10242016-10242400	K562	blood:	n/a	n/a
15	ARID3A	chr4:10122672-10123968	HepG2	liver:	n/a	n/a
16	ARID3A	chr4:10118478-10119106	K562	blood:	n/a	n/a
17	ARID3A	chr4:10186847-10188023	K562	blood:	n/a	n/a
18	ARID3A	chr4:10202441-10202778	K562	blood:	n/a	n/a
19	ARID3A	chr4:10206912-10207070	K562	blood:	n/a	n/a
20	ARID3A	chr4:10206944-10207053	HepG2	liver:	n/a	n/a
21	ARID3A	chr4:10159442-10159716	K562	blood:	n/a	n/a
22	ARID3A	chr4:10258670-10258802	K562	blood:	n/a	n/a
23	ATF1	chr4:10182216-10183403	K562	blood:	n/a	n/a
24	ATF1	chr4:10199601-10200004	K562	blood:	n/a	n/a
25	ATF1	chr4:10172681-10173016	K562	blood:	n/a	n/a
26	ATF1	chr4:10184693-10185042	K562	blood:	n/a	n/a
27	ATF1	chr4:10188186-10188661	K562	blood:	n/a	n/a
28	ATF1	chr4:10174911-10175439	K562	blood:	n/a	n/a
29	ATF1	chr4:10108289-10108595	K562	blood:	n/a	n/a
30	ATF1	chr4:10159418-10159720	K562	blood:	n/a	n/a
31	ATF1	chr4:10118542-10118883	K562	blood:	n/a	n/a
32	ATF1	chr4:10171263-10171804	K562	blood:	n/a	n/a
33	ATF1	chr4:10241521-10242349	K562	blood:	n/a	n/a
34	ATF1	chr4:10187244-10187892	K562	blood:	n/a	n/a
35	ATF2	chr4:10116281-10116639	H1-hESC	embryonic stem cell:	n/a	n/a
36	ATF2	chr4:10117291-10117950	GM12878	blood:	n/a	n/a
37	ATF2	chr4:10118586-10119550	H1-hESC	embryonic stem cell:	n/a	n/a
38	ATF2	chr4:10152775-10153075	GM12878	blood:	n/a	n/a
39	ATF2	chr4:10159305-10159743	H1-hESC	embryonic stem cell:	n/a	n/a
40	ATF2	chr4:10159321-10159751	H1-hESC	embryonic stem cell:	n/a	n/a
41	ATF2	chr4:10118639-10119069	H1-hESC	embryonic stem cell:	n/a	n/a
42	ATF2	chr4:10118626-10118966	GM12878	blood:	n/a	n/a
43	ATF2	chr4:10117273-10117973	H1-hESC	embryonic stem cell:	n/a	n/a
44	ATF2	chr4:10118218-10119845	GM12878	blood:	n/a	n/a
45	ATF2	chr4:10112611-10113952	H1-hESC	embryonic stem cell:	n/a	n/a
46	ATF2	chr4:10116355-10116749	H1-hESC	embryonic stem cell:	n/a	n/a
47	ATF2	chr4:10117657-10118032	H1-hESC	embryonic stem cell:	n/a	n/a
48	ATF2	chr4:10114184-10114609	H1-hESC	embryonic stem cell:	n/a	n/a
49	ATF2	chr4:10118991-10119493	GM12878	blood:	n/a	n/a
50	ATF3	chr4:10286691-10286995	K562	blood:	n/a	n/a

(count:1773 , 50 per page) page: 1 2 3 4 5 6 7 ... 36

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr4:10116515-10116565	HRPEpiC	eye:	n/a
2	chr4:10147302-10147352	NH-A	brain:	n/a
3	chr4:10119609-10119659	NHBE	bronchial:	n/a
4	chr4:10147330-10147380	AG10803	skin:	n/a
5	chr4:10116515-10116565	HRPEpiC	eye:	n/a
6	chr4:10147302-10147352	NH-A	brain:	n/a
7	chr4:10119609-10119659	NHBE	bronchial:	n/a
8	chr4:10147330-10147380	AG10803	skin:	n/a
9	chr4:10147302-10147352	ProgFib	skin:	n/a
10	chr4:10117799-10117849	SAEC	small airway:	n/a
11	chr4:10119810-10119860	HCF	heart:	n/a
12	chr4:10116515-10116565	HNPCEpiC	eye:	n/a
13	chr4:10147330-10147380	NB4	blood:	n/a
14	chr4:10125330-10125380	ovcar-3	ovarian:	n/a
15	chr4:10119697-10119747	Caco-2	colon:	n/a
16	chr4:10122153-10122203	NH-A	brain:	n/a
17	chr4:10143053-10143103	HUVEC	blood vessel:	n/a
18	chr4:10143053-10143103	SKMC	muscle:	n/a
19	chr4:10147606-10147656	NHBE	bronchial:	n/a
20	chr4:10110163-10110213	GM12891	blood:	n/a
21	chr4:10117799-10117849	HRPEpiC	eye:	n/a
22	chr4:10116515-10116565	HEEpiC	esophagus:	n/a
23	chr4:10147302-10147352	HMEC	breast:	n/a
24	chr4:10105548-10105598	HIPEpiC	eye:	n/a
25	chr4:10143053-10143103	BJ	skin:	n/a
26	chr4:10143053-10143103	AG04449	skin:	fetal
27	chr4:10105548-10105598	H1-hESC	embryonic stem cell:	embryo
28	chr4:10122153-10122203	ECC-1	luminal epithelium:	n/a
29	chr4:10118265-10118315	BJ	skin:	n/a
30	chr4:10147100-10147150	HCF	heart:	n/a
31	chr4:10117799-10117849	HepG2	liver:	n/a
32	chr4:10118677-10118727	Hepatocyte	liver:	n/a
33	chr4:10122153-10122203	HMEC	breast:	n/a
34	chr4:10110163-10110213	HL-60	blood:	n/a
35	chr4:10145483-10145533	HCM	heart:	n/a
36	chr4:10117479-10117529	HCF	heart:	n/a
37	chr4:10120780-10120830	RPTEC	kidney:	n/a
38	chr4:10118677-10118727	AG04450	lung:	fetal
39	chr4:10118984-10119034	HEEpiC	esophagus:	n/a
40	chr4:10118516-10118566	U87	brain:	n/a
41	chr4:10119609-10119659	HRCEpiC	kidney:	n/a
42	chr4:10147038-10147088	HMEC	breast:	n/a
43	chr4:10118516-10118566	BE2_C	brain:	n/a
44	chr4:10119609-10119659	HEEpiC	esophagus:	n/a
45	chr4:10112059-10112109	NHDF-neo	bronchial:	n/a
46	chr4:10110163-10110213	HRPEpiC	eye:	n/a
47	chr4:10120780-10120830	MCF10A-Er-Src	breast:	n/a
48	chr4:10143053-10143103	CMK	blood:	n/a
49	chr4:10110163-10110213	HRCEpiC	kidney:	n/a
50	chr4:10113794-10113844	PFSK-1	brain:	n/a

(count:344 , 50 per page) page: 1 2 3 4 5 6 7

No.	Distal block	Cell Line	Cell type
1	chr4:10207125..10208799-chr4:10284967..10286577,2	K562	blood:
2	chr4:10111136..10113091-chr4:10453721..10455357,2	K562	blood:
3	chr15:65596761..65597431-chr4:10118051..10119234,3	NB4	blood:
4	chr4:10207125..10208799-chr4:10284967..10286577,2	K562	blood:
5	chr1:11969419..11970303-chr4:10118380..10119027,2	HCT-116	colon:
6	chr4:10120616..10123591-chr4:10237653..10240360,2	K562	blood:
7	chr4:10183994..10188822-chr4:10326557..10329780,4	K562	blood:
8	chr4:10120325..10123218-chr4:10371729..10374334,2	K562	blood:
9	chr4:10118945..10120597-chr4:10522587..10525551,2	K562	blood:
10	chr4:10117842..10119536-chr4:10257217..10259311,2	K562	blood:
11	chr4:10116325..10123199-chr4:10169149..10177855,21	K562	blood:
12	chr4:10206033..10207589-chr4:10220077..10222198,2	K562	blood:
13	chr4:10271663..10274322-chr4:10278537..10280895,2	K562	blood:
14	chr4:10019909..10022554-chr4:10120525..10123585,3	K562	blood:
15	chr4:10182494..10184635-chr4:10284696..10287291,2	K562	blood:
16	chr4:10159186..10164011-chr4:10164137..10169302,8	K562	blood:
17	chr4:10242448..10244811-chr4:10340269..10342798,2	K562	blood:
18	chr17:47269694..47270307-chr4:10118653..10119466,2	Hela-S3	cervix:
19	chr4:10203874..10205718-chr4:10217408..10219978,2	K562	blood:
20	chr4:10118162..10120785-chr4:10200742..10203933,4	K562	blood:
21	chr4:10117528..10120943-chr4:10131939..10133897,4	MCF-7	breast:
22	chr4:10117300..10124855-chr4:10138380..10145377,13	MCF-7	breast:
23	chr4:10120346..10122319-chr4:10312436..10314039,2	K562	blood:
24	chr4:10124627..10126326-chr4:10129593..10131682,2	MCF-7	breast:
25	chr4:10116325..10123199-chr4:10169149..10177855,21	K562	blood:
26	chr4:10234367..10236533-chr4:10242137..10244033,2	K562	blood:
27	chr4:10114162..10115900-chr4:10186432..10189186,2	K562	blood:
28	chr17:62971116..62971769-chr4:10117977..10118825,2	HCT-116	colon:
29	chr4:10118323..10118922-chr9:88896214..88897112,2	Hela-S3	cervix:
30	chr19:10224335..10225204-chr4:10118675..10119254,2	NB4	blood:
31	chr4:10109894..10126876-chr4:10164648..10190106,79	K562	blood:
32	chr4:10254361..10256671-chr4:10262474..10264248,2	K562	blood:
33	chr4:10182377..10185038-chr4:10453503..10456156,2	K562	blood:
34	chr4:10288926..10293598-chr4:10293770..10299284,5	K562	blood:
35	chr4:10119416..10121988-chr4:10218168..10219976,2	K562	blood:
36	chr4:10182491..10184302-chr4:10237283..10239761,2	K562	blood:
37	chr4:10181799..10184639-chr4:10262185..10264664,2	K562	blood:
38	chr4:10121162..10125014-chr4:10131852..10134322,3	MCF-7	breast:
39	chr4:10110778..10113486-chr4:11404692..11406354,2	K562	blood:
40	chr4:10239005..10240530-chr4:10240711..10243694,2	K562	blood:
41	chr4:10146309..10149123-chr4:10156130..10158993,2	K562	blood:
42	chr4:10182377..10184143-chr4:10453503..10455042,2	K562	blood:
43	chr4:10142468..10145387-chr4:10146611..10148310,2	MCF-7	breast:
44	chr4:10249783..10252189-chr4:10254326..10257178,3	K562	blood:
45	chr4:10187220..10189194-chr4:10403510..10406450,3	K562	blood:
46	chr4:10140841..10143166-chr4:10164924..10167000,2	K562	blood:
47	chr4:10249783..10252189-chr4:10254326..10257178,3	K562	blood:
48	chr4:10160663..10163901-chr4:10177399..10182680,5	K562	blood:
49	chr4:10141623..10144820-chr4:10145857..10148531,3	K562	blood:
50	chr4:10218238..10220165-chr4:10231013..10232714,2	K562	blood:

(count:10 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-WDR1-4	chr4:10159007-10159491	NONHSAT095472
2	lnc-ZNF518B-3	chr4:10286585-10287332	NONHSAT095493
3	lnc-WDR1-7	chr4:10201447-10202296	NONHSAT095488
4	lnc-WDR1-6	chr4:10168783-10169389	NONHSAT095487
5	lnc-WDR1-2	chr4:10144991-10145279	NONHSAT095429
6	lnc-ZNF518B-2	chr4:10293819-10294332	NONHSAT095494
7	lnc-WDR1-10	chr4:10261069-10261762	NONHSAT095491
8	lnc-WDR1-11	chr4:10269519-10269855	NONHSAT095492
9	lnc-WDR1-9	chr4:10256550-10258245	NONHSAT095490
10	lnc-WDR1-4	chr4:10151989-10152058	NONHSAT095472

No data

Variant related genes	Relation type
RNA5SP155	TF binding region
ENSG00000248777	TF binding region
ENSG00000251338	TF binding region
ENSG00000271544	TF binding region
ENSG00000250040	TF binding region
ENSG00000251296	TF binding region
ENSG00000250074	TF binding region
WDR1	TF binding region
ENSG00000251278	TF binding region
ENSG00000250573	TF binding region
ENSG00000250505	TF binding region
ENSG00000250393	TF binding region
RNA5SP155	CpG island
ENSG00000248777	CpG island
ENSG00000251338	CpG island
ENSG00000271544	CpG island
ENSG00000250040	CpG island
ENSG00000251296	CpG island
ENSG00000250074	CpG island
WDR1	CpG island
ENSG00000251278	CpG island
ENSG00000250573	CpG island
ENSG00000250505	CpG island
ENSG00000250393	CpG island
ENSG00000135070	chromatin interactions
ENSG00000071127	chromatin interactions
ENSG00000251296	chromatin interactions
ENSG00000109787	chromatin interactions
ENSG00000250040	chromatin interactions
ENSG00000264931	chromatin interactions
ENSG00000178163	chromatin interactions
ENSG00000250573	chromatin interactions
ENSG00000137203	chromatin interactions
ENSG00000200156	chromatin interactions
ENSG00000145390	chromatin interactions
ENSG00000214174	chromatin interactions
ENSG00000156983	chromatin interactions
ENSG00000271544	chromatin interactions
ENSG00000223086	chromatin interactions
ENSG00000109667	chromatin interactions
ENSG00000169814	chromatin interactions
ENSG00000250393	chromatin interactions
ENSG00000250613	chromatin interactions
ENSG00000247624	chromatin interactions
ENSG00000229117	chromatin interactions
ENSG00000150459	chromatin interactions
ENSG00000131373	chromatin interactions
ENSG00000248777	chromatin interactions
ENSG00000233554	chromatin interactions
ENSG00000256316	chromatin interactions
ENSG00000199377	chromatin interactions
ENSG00000116539	chromatin interactions
ENSG00000201801	chromatin interactions
ENSG00000172732	chromatin interactions
ENSG00000198374	chromatin interactions
ENSG00000251338	chromatin interactions
ENSG00000134294	chromatin interactions
ENSG00000144029	chromatin interactions
ENSG00000162616	chromatin interactions
ENSG00000251278	chromatin interactions
ENSG00000273338	chromatin interactions
ENSG00000178636	chromatin interactions
ENSG00000137449	chromatin interactions
ENSG00000196355	chromatin interactions
ENSG00000250074	chromatin interactions
ENSG00000163527	chromatin interactions
ENSG00000231160	chromatin interactions
ENSG00000116161	chromatin interactions
ENSG00000086062	chromatin interactions

Extended variants
information (count: 13677 )
Associated
traits (count: 58 )

Variant overlapped rSNPs/rCNVs (count:13677 , 50 per page) page: 1 2 3 4 5 6 7 ... 274

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs532863717	chr4:10103071-10103072	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
2	rs115893056	chr4:10103080-10103081	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
3	rs142543598	chr4:10103100-10103101	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
4	rs545260820	chr4:10103138-10103139	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
5	rs560525081	chr4:10103218-10103219	Strong transcription Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
6	rs527848086	chr4:10103226-10103227	Strong transcription Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
7	rs541391861	chr4:10103227-10103228	Strong transcription Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
8	rs549304459	chr4:10103236-10103237	Strong transcription Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
9	rs192223325	chr4:10103260-10103261	Strong transcription Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
10	rs182752635	chr4:10103276-10103277	Strong transcription Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
11	rs549837086	chr4:10103279-10103280	Strong transcription Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
12	rs375978941	chr4:10103283-10103284	Strong transcription Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
13	rs570908268	chr4:10103297-10103298	Strong transcription Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
14	rs571229503	chr4:10103328-10103329	Strong transcription Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
15	rs538957818	chr4:10103350-10103351	Strong transcription Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
16	rs547621815	chr4:10103381-10103382	Strong transcription Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs565744981	chr4:10103388-10103389	Strong transcription Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs369313665	chr4:10103404-10103405	Strong transcription Weak transcription Genic enhancers Enhancers Flanking Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs77061742	chr4:10103410-10103411	Strong transcription Weak transcription Genic enhancers Enhancers Flanking Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs370339051	chr4:10103415-10103416	Strong transcription Weak transcription Genic enhancers Enhancers Flanking Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs188921613	chr4:10103464-10103465	Strong transcription Weak transcription Genic enhancers Enhancers Flanking Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs567449487	chr4:10103486-10103487	Strong transcription Weak transcription Genic enhancers Enhancers Flanking Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs192484092	chr4:10103493-10103494	Strong transcription Weak transcription Genic enhancers Enhancers Flanking Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs184708715	chr4:10103503-10103504	Strong transcription Weak transcription Genic enhancers Enhancers Flanking Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs188875315	chr4:10103506-10103507	Strong transcription Weak transcription Genic enhancers Enhancers Flanking Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs545387816	chr4:10103550-10103551	Strong transcription Weak transcription Genic enhancers Enhancers Flanking Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs34930039	chr4:10103644-10103645	Strong transcription Weak transcription Genic enhancers Flanking Active TSS Enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
28	rs554491069	chr4:10103663-10103664	Strong transcription Weak transcription Genic enhancers Flanking Active TSS Enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
29	rs572647438	chr4:10103671-10103672	Strong transcription Weak transcription Genic enhancers Flanking Active TSS Enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
30	rs543233865	chr4:10103674-10103675	Strong transcription Weak transcription Genic enhancers Flanking Active TSS Enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
31	rs141851746	chr4:10103701-10103702	Strong transcription Weak transcription Genic enhancers Flanking Active TSS Enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
32	rs561453708	chr4:10103717-10103718	Strong transcription Weak transcription Genic enhancers Flanking Active TSS Enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
33	rs191805586	chr4:10103773-10103774	Strong transcription Weak transcription Genic enhancers Flanking Active TSS Enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
34	rs548677012	chr4:10103780-10103781	Strong transcription Weak transcription Genic enhancers Flanking Active TSS Enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
35	rs74614932	chr4:10103802-10103803	Strong transcription Weak transcription Genic enhancers Enhancers Flanking Active TSS Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
36	rs570194860	chr4:10103815-10103816	Strong transcription Weak transcription Genic enhancers Enhancers Flanking Active TSS Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
37	rs140955312	chr4:10103864-10103865	Strong transcription Weak transcription Genic enhancers Enhancers Flanking Active TSS Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
38	rs12499240	chr4:10103890-10103891	Strong transcription Weak transcription Genic enhancers Enhancers Flanking Active TSS Transcr. at gene 5' and 3'	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
39	rs552369019	chr4:10103891-10103892	Strong transcription Weak transcription Genic enhancers Enhancers Flanking Active TSS Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
40	rs184607731	chr4:10103915-10103916	Strong transcription Weak transcription Genic enhancers Enhancers Flanking Active TSS Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
41	rs145774797	chr4:10103953-10103954	Strong transcription Weak transcription Genic enhancers Enhancers Flanking Active TSS Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
42	rs566009090	chr4:10103973-10103974	Strong transcription Weak transcription Genic enhancers Enhancers Flanking Active TSS Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
43	rs138442050	chr4:10104008-10104009	Genic enhancers Weak transcription Strong transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
44	rs35116167	chr4:10104014-10104015	Genic enhancers Weak transcription Strong transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
45	rs548399824	chr4:10104021-10104022	Genic enhancers Weak transcription Strong transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
46	rs537098130	chr4:10104053-10104054	Genic enhancers Weak transcription Strong transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
47	rs34893238	chr4:10104103-10104104	Genic enhancers Weak transcription Strong transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
48	rs189542907	chr4:10104121-10104122	Genic enhancers Weak transcription Strong transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
49	rs556199575	chr4:10104159-10104160	Genic enhancers Weak transcription Strong transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
50	rs73212863	chr4:10104173-10104174	Genic enhancers Weak transcription Strong transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance

Variant related diseases (count:58)

Disease	PMID	Source
Colorectal cancer	16272173	CNVD
Non-syndromic sensorineural hearing loss	20606397	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Wilms tumour	21544195	CNVD
Breast cancer	17603634	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	17053054	CNVD
Colorectal cancer	19359472	CNVD
Neuroblastoma	17533364	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Cancer	21637783	CNVD
Melanoma	21693616	CNVD
Squamous cell cancer	21044232	CNVD
Colorectal cancer	20709793	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Non-small cell lung cancer	21044232	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	17387387	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Cervical cancer	21062161	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Glioblastoma multiforme	21080181	CNVD
Chordoma	21602918	CNVD
HIV/AIDS	22032296	CNVD
Neuroblastoma	18923191	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Prostate cancer	18632612	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Breast cancer	21785460	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Breast cancer	21509527	CNVD
Lung cancer	18438408	CNVD
Myelofibrosis	22110671	CNVD
Hirschsprung''s Disease	21712996	CNVD
Schizophrenia	22241247	CNVD
Autosomal-dominant microtia	18179897	CNVD
Glioma	17123091	CNVD
Colorectal cancer	20459617	CNVD
Breast cancer	17133270	CNVD
Sezary syndrome	18413736	CNVD
Breast cancer	21858162	CNVD
small cell lung cancer	20016488	CNVD
Neuroblastoma	20406844	CNVD
Schizophrenia	23813976	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD

Chromatin state (count:2621 , 50 per page) page: 1 2 3 4 5 6 7 ... 53

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:10073800-10103800	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
2	chr4:10073800-10103800	Strong transcription	HUES64 Cell Line	embryonic stem cell
3	chr4:10074000-10103800	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr4:10074000-10105600	Strong transcription	H9 Cell Line	embryonic stem cell
5	chr4:10074200-10106600	Strong transcription	Dnd41	blood
6	chr4:10081600-10103600	Genic enhancers	Breast Myoepithelial Primary Cells	Breast
7	chr4:10084400-10114000	Genic enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
8	chr4:10084800-10116600	Genic enhancers	Fetal Muscle Leg	muscle
9	chr4:10085800-10103400	Enhancers	Fetal Heart	heart
10	chr4:10089600-10107800	Genic enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
11	chr4:10090200-10105600	Genic enhancers	Right Ventricle	heart
12	chr4:10090400-10105000	Genic enhancers	Colonic Mucosa	Colon
13	chr4:10090400-10106800	Genic enhancers	Fetal Muscle Trunk	muscle
14	chr4:10090400-10116400	Genic enhancers	Primary T cells fromperipheralblood	blood
15	chr4:10091200-10105800	Genic enhancers	Primary T helper cells fromperipheralblood	blood
16	chr4:10091800-10116800	Genic enhancers	Primary Natural Killer cells fromperipheralblood	blood
17	chr4:10092200-10106400	Genic enhancers	Primary T regulatory cells fromperipheralblood	blood
18	chr4:10092400-10107400	Genic enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
19	chr4:10093000-10116800	Genic enhancers	Fetal Thymus	thymus
20	chr4:10093400-10103800	Genic enhancers	HUVEC	blood vessel
21	chr4:10093600-10104600	Genic enhancers	Brain Inferior Temporal Lobe	brain
22	chr4:10093800-10103800	Genic enhancers	Rectal Smooth Muscle	rectum
23	chr4:10093800-10110800	Genic enhancers	Primary T cells from cord blood	blood
24	chr4:10093800-10116000	Genic enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
25	chr4:10094000-10104800	Genic enhancers	NHLF	lung
26	chr4:10094200-10108000	Genic enhancers	HMEC	breast
27	chr4:10094400-10104600	Genic enhancers	Primary monocytes fromperipheralblood	blood
28	chr4:10094400-10105000	Genic enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
29	chr4:10094600-10104400	Genic enhancers	GM12878-XiMat	blood
30	chr4:10094600-10105000	Genic enhancers	Esophagus	oesophagus
31	chr4:10094600-10105200	Genic enhancers	NHDF-Ad	bronchial
32	chr4:10095000-10104000	Strong transcription	iPS-18 Cell Line	embryonic stem cell
33	chr4:10095200-10106800	Strong transcription	HepG2	liver
34	chr4:10095400-10105600	Strong transcription	HUES48 Cell Line	embryonic stem cell
35	chr4:10095400-10105800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
36	chr4:10095600-10104200	Strong transcription	iPS-15b Cell Line	embryonic stem cell
37	chr4:10095600-10107600	Strong transcription	Fetal Intestine Large	intestine
38	chr4:10096000-10104200	Strong transcription	HUES6 Cell Line	embryonic stem cell
39	chr4:10096000-10104600	Strong transcription	iPS-20b Cell Line	embryonic stem cell
40	chr4:10096000-10104600	Genic enhancers	Left Ventricle	heart
41	chr4:10096400-10104000	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
42	chr4:10096400-10105800	Strong transcription	Fetal Intestine Small	intestine
43	chr4:10096800-10106200	Genic enhancers	Thymus	Thymus
44	chr4:10097800-10110600	Enhancers	Fetal Brain Male	brain
45	chr4:10098000-10105600	Genic enhancers	Colon Smooth Muscle	Colon
46	chr4:10098200-10112200	Genic enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
47	chr4:10098400-10104600	Genic enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
48	chr4:10098600-10104400	Genic enhancers	Monocytes-CD14+_RO01746	blood
49	chr4:10098600-10104600	Genic enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
50	chr4:10098600-10106200	Strong transcription	A549	lung

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