Variant report

Variant nsv537636
Chromosome Location chr5:8522331-8747061
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:208 , 50 per page) page: 1 2 3 4 5
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:8517600-8532200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr5:8520200-8522400 Enhancers Cortex derived primary cultured neurospheres brain
3 chr5:8520400-8522800 Enhancers HUES48 Cell Line embryonic stem cell
4 chr5:8521400-8524600 Weak transcription Fetal Muscle Leg muscle
5 chr5:8522000-8522400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
6 chr5:8522000-8523400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
7 chr5:8523400-8523600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
8 chr5:8524600-8525400 Enhancers Fetal Muscle Trunk muscle
9 chr5:8524600-8525800 Enhancers Fetal Muscle Leg muscle
10 chr5:8525400-8528400 Weak transcription Fetal Muscle Trunk muscle
11 chr5:8525800-8528600 Weak transcription Fetal Muscle Leg muscle
12 chr5:8528400-8529800 Active TSS Fetal Muscle Trunk muscle
13 chr5:8528600-8528800 Flanking Active TSS Fetal Muscle Leg muscle
14 chr5:8528800-8529800 Active TSS Fetal Muscle Leg muscle
15 chr5:8529800-8530000 Flanking Active TSS Fetal Muscle Leg muscle
16 chr5:8539000-8539600 Enhancers Fetal Brain Male brain
17 chr5:8543800-8544200 Enhancers Fetal Adrenal Gland Adrenal Gland
18 chr5:8550000-8550200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr5:8550200-8551200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
20 chr5:8551200-8551800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
21 chr5:8562200-8562600 Enhancers Fetal Muscle Leg muscle
22 chr5:8565400-8565800 Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
23 chr5:8569000-8569400 Enhancers Fetal Muscle Trunk muscle
24 chr5:8569000-8569800 Enhancers iPS-18 Cell Line embryonic stem cell
25 chr5:8569200-8569600 Enhancers ES-I3 Cell Line embryonic stem cell
26 chr5:8569200-8569800 Enhancers HUES6 Cell Line embryonic stem cell
27 chr5:8569200-8569800 Enhancers iPS-15b Cell Line embryonic stem cell
28 chr5:8569200-8570000 Enhancers HUES48 Cell Line embryonic stem cell
29 chr5:8569400-8569800 Enhancers H1 Cell Line embryonic stem cell
30 chr5:8569400-8569800 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr5:8576000-8576600 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr5:8576000-8576800 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr5:8586800-8587000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr5:8592800-8594600 Enhancers Fetal Adrenal Gland Adrenal Gland
35 chr5:8597000-8597800 Enhancers Fetal Brain Female brain
36 chr5:8597000-8598600 Enhancers Fetal Brain Male brain
37 chr5:8597800-8599000 Weak transcription Fetal Brain Female brain
38 chr5:8598400-8599200 Enhancers Fetal Lung lung
39 chr5:8598600-8599000 Flanking Active TSS Fetal Brain Male brain
40 chr5:8599000-8600000 Enhancers Fetal Brain Female brain
41 chr5:8599000-8600200 Enhancers Fetal Brain Male brain
42 chr5:8599200-8599400 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
43 chr5:8599400-8606000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
44 chr5:8601000-8604000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
45 chr5:8601400-8602800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
46 chr5:8602800-8607200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
47 chr5:8604000-8606200 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
48 chr5:8606000-8606400 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
49 chr5:8606200-8606600 Enhancers H9 Cell Line embryonic stem cell
50 chr5:8606200-8608000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

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