Variant report

Variant nsv537708
Chromosome Location chr5:28165763-28370968
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:107 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:28164400-28166200 Enhancers HUVEC blood vessel
2 chr5:28164800-28166000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
3 chr5:28164800-28166000 Enhancers Breast Myoepithelial Primary Cells Breast
4 chr5:28164800-28166000 Enhancers Brain Substantia Nigra brain
5 chr5:28164800-28166200 Enhancers Fetal Adrenal Gland Adrenal Gland
6 chr5:28165200-28166000 Enhancers Cortex derived primary cultured neurospheres brain
7 chr5:28165400-28165800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
8 chr5:28165400-28165800 Active TSS Brain Cingulate Gyrus brain
9 chr5:28165400-28165800 Flanking Active TSS Brain Hippocampus Middle brain
10 chr5:28165400-28166200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr5:28165400-28166200 Enhancers Ovary ovary
12 chr5:28165600-28165800 Enhancers Adipose Nuclei Adipose
13 chr5:28165600-28166200 Enhancers Placenta Amnion Placenta Amnion
14 chr5:28165800-28166000 Enhancers Brain Anterior Caudate brain
15 chr5:28165800-28166800 Enhancers Brain Hippocampus Middle brain
16 chr5:28166000-28166400 Weak transcription Breast Myoepithelial Primary Cells Breast
17 chr5:28166200-28166600 Weak transcription HUVEC blood vessel
18 chr5:28166400-28167400 Enhancers Breast Myoepithelial Primary Cells Breast
19 chr5:28166800-28167000 Enhancers HUVEC blood vessel
20 chr5:28166800-28168800 Weak transcription Brain Hippocampus Middle brain
21 chr5:28168800-28169000 Enhancers Brain Hippocampus Middle brain
22 chr5:28177600-28177800 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
23 chr5:28189600-28190200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
24 chr5:28189600-28190400 Enhancers iPS-15b Cell Line embryonic stem cell
25 chr5:28189600-28190400 Enhancers Fetal Adrenal Gland Adrenal Gland
26 chr5:28189600-28190600 Enhancers Breast Myoepithelial Primary Cells Breast
27 chr5:28192600-28192800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
28 chr5:28192600-28192800 Enhancers Brain Anterior Caudate brain
29 chr5:28192600-28193400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
30 chr5:28192800-28193200 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
31 chr5:28192800-28193200 Active TSS Brain Anterior Caudate brain
32 chr5:28193000-28193400 Enhancers Cortex derived primary cultured neurospheres brain
33 chr5:28193200-28193400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
34 chr5:28202800-28203000 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
35 chr5:28213800-28216800 Enhancers Dnd41 blood
36 chr5:28215600-28216000 Enhancers Fetal Kidney kidney
37 chr5:28216800-28217600 Enhancers Primary hematopoietic stem cells short term culture blood
38 chr5:28216800-28217600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr5:28216800-28218000 Flanking Active TSS Dnd41 blood
40 chr5:28216800-28218200 Enhancers GM12878-XiMat blood
41 chr5:28217000-28217600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr5:28218000-28218400 Enhancers Dnd41 blood
43 chr5:28228400-28228800 Enhancers Dnd41 blood
44 chr5:28234400-28234800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
45 chr5:28242800-28243400 Enhancers Dnd41 blood
46 chr5:28243400-28245400 Weak transcription Dnd41 blood
47 chr5:28245400-28247000 Enhancers Dnd41 blood
48 chr5:28250000-28251200 Enhancers Pancreatic Islets Pancreatic Islet
49 chr5:28253200-28253800 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
50 chr5:28255000-28255400 Enhancers NH-A brain

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