Variant report

Variant	nsv537725
Chromosome Location	chr5:36899712-37303001
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:2746)
CpG islands
(count:1407)
Chromatin interactive
region (count:245)
LncRNA
region (count:25)
Mature miRNA
region (count: 0)
miRNA target
sites (count:13)

(count:2746 , 50 per page) page: 1 2 3 4 5 6 7 ... 55

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr5:36944203-36945211	K562	blood:	n/a	n/a
2	ARID3A	chr5:37006056-37006376	K562	blood:	n/a	n/a
3	ARID3A	chr5:37249328-37249415	HepG2	liver:	n/a	n/a
4	ARID3A	chr5:36929569-36929706	K562	blood:	n/a	n/a
5	ARID3A	chr5:37002178-37002846	HepG2	liver:	n/a	n/a
6	ARID3A	chr5:37090579-37090786	HepG2	liver:	n/a	n/a
7	ARID3A	chr5:37186654-37186894	K562	blood:	n/a	n/a
8	ARID3A	chr5:37006632-37006811	K562	blood:	n/a	n/a
9	ARID3A	chr5:37064616-37064865	HepG2	liver:	n/a	n/a
10	ARID3A	chr5:37187395-37187971	K562	blood:	n/a	n/a
11	ARID3A	chr5:37093963-37094296	HepG2	liver:	n/a	n/a
12	ARID3A	chr5:37086569-37086924	HepG2	liver:	n/a	n/a
13	ARID3A	chr5:36944696-36945107	HepG2	liver:	n/a	n/a
14	ARID3A	chr5:36962968-36963071	K562	blood:	n/a	n/a
15	ARID3A	chr5:37072176-37072480	HepG2	liver:	n/a	n/a
16	ARID3A	chr5:36929086-36929329	K562	blood:	n/a	n/a
17	ATF1	chr5:36999925-37000005	K562	blood:	n/a	n/a
18	ATF1	chr5:37212334-37212527	K562	blood:	n/a	n/a
19	ATF2	chr5:37111632-37112319	GM12878	blood:	n/a	n/a
20	ATF2	chr5:36998719-36999066	GM12878	blood:	n/a	n/a
21	ATF2	chr5:37111802-37112401	GM12878	blood:	n/a	n/a
22	ATF2	chr5:36998676-36999169	GM12878	blood:	n/a	n/a
23	ATF2	chr5:37249330-37249721	GM12878	blood:	n/a	n/a
24	ATF3	chr5:37199018-37199279	K562	blood:	n/a	n/a
25	ATF3	chr5:37272710-37273010	A549	lung:	n/a	n/a
26	BACH1	chr5:37249622-37249625	H1-hESC	embryonic stem cell:	n/a	n/a
27	BACH1	chr5:37226577-37226771	K562	blood:	n/a	n/a
28	BATF	chr5:37111589-37111819	GM12878	blood:	n/a	n/a
29	BATF	chr5:37111859-37112401	GM12878	blood:	n/a	n/a
30	BATF	chr5:37184885-37185136	GM12878	blood:	n/a	n/a
31	BATF	chr5:36998569-36998958	GM12878	blood:	n/a	n/a
32	BATF	chr5:37111939-37112363	GM12878	blood:	n/a	n/a
33	BCL11A	chr5:37111903-37112326	GM12878	blood:	n/a	n/a
34	BCL11A	chr5:37184880-37185082	GM12878	blood:	n/a	n/a
35	BCL11A	chr5:37197865-37198057	GM12878	blood:	n/a	n/a
36	BCL11A	chr5:37111962-37112177	GM12878	blood:	n/a	n/a
37	BCL3	chr5:37249087-37249607	A549	lung:	n/a	chr5:37249490-37249503 chr5:37249563-37249572
38	BCLAF1	chr5:37111538-37112372	GM12878	blood:	n/a	n/a
39	BCLAF1	chr5:37248901-37249584	GM12878	blood:	n/a	chr5:37249490-37249503 chr5:37249563-37249572
40	BHLHE40	chr5:37182444-37182640	GM12878	blood:	n/a	n/a
41	BHLHE40	chr5:37184866-37185356	GM12878	blood:	n/a	n/a
42	BHLHE40	chr5:37215222-37215328	GM12878	blood:	n/a	n/a
43	BHLHE40	chr5:37209321-37209328	K562	blood:	n/a	n/a
44	BHLHE40	chr5:37111689-37112456	GM12878	blood:	n/a	n/a
45	BHLHE40	chr5:36955382-36955388	GM12878	blood:	n/a	n/a
46	BRCA1	chr5:37174252-37174265	Hela-S3	cervix:	n/a	n/a
47	BRCA1	chr5:37272337-37273087	Hela-S3	cervix:	n/a	n/a
48	BRCA1	chr5:36951118-36951430	Hela-S3	cervix:	n/a	n/a
49	BRCA1	chr5:37248654-37249941	Hela-S3	cervix:	n/a	n/a
50	CBX3	chr5:37280036-37280373	K562	blood:	n/a	n/a

(count:1407 , 50 per page) page: 1 2 3 4 5 6 7 ... 29

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr5:36986137-36986187	MCF10A-Er-Src	breast:	n/a
2	chr5:37072108-37072158	AG04449	skin:	fetal
3	chr5:37107062-37107112	SKMC	muscle:	n/a
4	chr5:37211096-37211146	ovcar-3	ovarian:	n/a
5	chr5:36986137-36986187	MCF10A-Er-Src	breast:	n/a
6	chr5:37072108-37072158	AG04449	skin:	fetal
7	chr5:37107062-37107112	SKMC	muscle:	n/a
8	chr5:37211096-37211146	ovcar-3	ovarian:	n/a
9	chr5:37211096-37211146	SAEC	small airway:	n/a
10	chr5:36986137-36986187	AoSMC	blood vessel:	n/a
11	chr5:37251010-37251060	ECC-1	luminal epithelium:	n/a
12	chr5:36985656-36985706	NHBE	bronchial:	n/a
13	chr5:37249223-37249273	AG04449	skin:	fetal
14	chr5:37249909-37249959	ECC-1	luminal epithelium:	n/a
15	chr5:36985656-36985706	NB4	blood:	n/a
16	chr5:37208976-37209026	HUVEC	blood vessel:	n/a
17	chr5:36985656-36985706	HRCEpiC	kidney:	n/a
18	chr5:37209182-37209232	PFSK-1	brain:	n/a
19	chr5:37072108-37072158	BJ	skin:	n/a
20	chr5:37209332-37209382	AG04449	skin:	fetal
21	chr5:37209332-37209382	GM12892	blood:	n/a
22	chr5:37209268-37209318	SK-N-MC	brain:	n/a
23	chr5:37107062-37107112	A549	lung:	n/a
24	chr5:37107062-37107112	Hepatocyte	liver:	n/a
25	chr5:36985656-36985706	SKMC	muscle:	n/a
26	chr5:37209182-37209232	ECC-1	luminal epithelium:	n/a
27	chr5:36986137-36986187	AG04449	skin:	fetal
28	chr5:37209268-37209318	PFSK-1	brain:	n/a
29	chr5:37207622-37207672	Caco-2	colon:	n/a
30	chr5:37209440-37209490	HPAEpiC	pulmonary alveolar:	n/a
31	chr5:37072108-37072158	H1-hESC	embryonic stem cell:	embryo
32	chr5:37207622-37207672	NB4	blood:	n/a
33	chr5:37207622-37207672	SKMC	muscle:	n/a
34	chr5:37250092-37250142	HCT-116	colon:	n/a
35	chr5:37248894-37248944	HEEpiC	esophagus:	n/a
36	chr5:36986137-36986187	AG04450	lung:	fetal
37	chr5:37249405-37249455	AG09309	skin:	n/a
38	chr5:37014180-37014230	T-47D	breast:	n/a
39	chr5:37206515-37206565	HPAEpiC	pulmonary alveolar:	n/a
40	chr5:37064839-37064889	BE2_C	brain:	n/a
41	chr5:37207622-37207672	HCT-116	colon:	n/a
42	chr5:37208976-37209026	GM12891	blood:	n/a
43	chr5:37209332-37209382	HPAEpiC	pulmonary alveolar:	n/a
44	chr5:36986137-36986187	HCM	heart:	n/a
45	chr5:37209332-37209382	HMEC	breast:	n/a
46	chr5:37249909-37249959	HCT-116	colon:	n/a
47	chr5:37211096-37211146	HCM	heart:	n/a
48	chr5:37251010-37251060	HUVEC	blood vessel:	n/a
49	chr5:37064839-37064889	HIPEpiC	eye:	n/a
50	chr5:36985656-36985706	GM06990	blood:	n/a

(count:245 , 50 per page) page: 1 2 3 4 5

No.	Distal block	Cell Line	Cell type
1	chr5:36927710..36929639-chr5:36961627..36963604,2	MCF-7	breast:
2	chr5:37089091..37091586-chr5:37092682..37094967,2	K562	blood:
3	chr5:36980854..36983652-chr5:37007051..37009220,2	K562	blood:
4	chr5:37112874..37116886-chr5:37117758..37121364,3	K562	blood:
5	chr5:36913361..36915325-chr5:36918207..36920835,2	K562	blood:
6	chr5:36971660..36974021-chr5:36977884..36980284,2	K562	blood:
7	chr5:37074333..37077289-chr5:37078175..37080893,2	K562	blood:
8	chr5:37080220..37082600-chr5:37085134..37087206,2	K562	blood:
9	chr5:37112874..37116886-chr5:37117758..37121364,3	K562	blood:
10	chr5:36908573..36910125-chr5:36910550..36913083,2	MCF-7	breast:
11	chr5:36878820..36881398-chr5:36921398..36924147,2	K562	blood:
12	chr5:36982523..36985797-chr5:36985897..36989039,3	K562	blood:
13	chr5:37247385..37249387-chr5:37291319..37293555,2	MCF-7	breast:
14	chr5:37242850..37244799-chr5:37268818..37270992,2	MCF-7	breast:
15	chr5:36937606..36940951-chr5:36941936..36944746,3	K562	blood:
16	chr5:36876634..36880507-chr5:36935586..36937738,3	MCF-7	breast:
17	chr5:36975370..36977212-chr5:36981265..36983072,2	MCF-7	breast:
18	chr5:36987049..36989193-chr5:36992034..36994434,2	MCF-7	breast:
19	chr5:36952816..36955037-chr5:36959684..36961296,2	K562	blood:
20	chr5:37248443..37250196-chr5:37254645..37256658,2	MCF-7	breast:
21	chr5:36876484..36879168-chr5:36940218..36943816,3	MCF-7	breast:
22	chr5:37089091..37091586-chr5:37092682..37094967,2	K562	blood:
23	chr5:36959262..36961457-chr5:36965516..36967978,2	K562	blood:
24	chr5:37189588..37191318-chr5:37194423..37196397,2	K562	blood:
25	chr5:36874711..36878038-chr5:36947695..36950933,3	K562	blood:
26	chr5:36913361..36915325-chr5:36918207..36920835,2	K562	blood:
27	chr17:41465731..41466245-chr5:37249205..37250047,2	Hela-S3	cervix:
28	chr5:36265612..36266113-chr5:37006206..37006706,2	K562	blood:
29	chr5:37074741..37077292-chr5:37078064..37079770,2	MCF-7	breast:
30	chr5:36875672..36878039-chr5:36951739..36953901,2	MCF-7	breast:
31	chr5:37107871..37109372-chr5:37113814..37115407,2	MCF-7	breast:
32	chr5:37051265..37053983-chr5:37054266..37057675,3	K562	blood:
33	chr5:37009245..37010939-chr5:37023761..37025926,2	K562	blood:
34	chr5:36877627..36879271-chr5:36903588..36906365,2	MCF-7	breast:
35	chr5:36932364..36935161-chr5:36941200..36944542,3	K562	blood:
36	chr5:37058454..37060684-chr5:37064235..37067128,2	K562	blood:
37	chr5:36875949..36878043-chr5:36936778..36939206,2	MCF-7	breast:
38	chr5:36952816..36955037-chr5:36959684..36961296,2	K562	blood:
39	chr5:36739462..36740370-chr5:36944609..36945180,2	K562	blood:
40	chr5:36937263..36939579-chr5:36939659..36941382,2	MCF-7	breast:
41	chr5:37107871..37109372-chr5:37113814..37115407,2	MCF-7	breast:
42	chr5:36984035..36986257-chr5:36992707..36994891,2	K562	blood:
43	chr5:37300122..37302180-chr5:37303244..37306127,2	K562	blood:
44	chr5:36919106..36922235-chr5:36923697..36927353,5	K562	blood:
45	chr5:36875507..36877384-chr5:36931274..36933956,2	MCF-7	breast:
46	chr5:36920129..36922816-chr5:36925625..36927920,2	MCF-7	breast:
47	chr5:36874429..36878345-chr5:36984473..36987380,3	MCF-7	breast:
48	chr5:37296733..37298868-chr5:37344772..37346341,2	K562	blood:
49	chr5:37161560..37164016-chr5:37164106..37165808,2	MCF-7	breast:
50	chr5:37123727..37125351-chr5:37128419..37130769,2	K562	blood:

(count:25 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-NUP155-4	chr5:37157770-37157916	NONHSAT101054
2	lnc-C5orf42-1	chr5:37072107-37072811	XLOC_004787
3	lnc-NUP155-6	chr5:37139442-37139689	NONHSAT101053
4	lnc-NIPBL-3	chr5:37069673-37075373	NONHSAT101047
5	lnc-SLC1A3-1	chr5:36910492-36912362	l_2904_chr5:36907213-36912362_kidney
6	lnc-NIPBL-4	chr5:37077734-37080044	NONHSAT101050
7	lnc-NUP155-4	chr5:37158326-37158447	NONHSAT101054
8	lnc-NUP155-3	chr5:37173857-37174049	NONHSAT101055
9	lnc-NUP155-4	chr5:37162567-37162756	NONHSAT101054
10	lnc-NUP155-1	chr5:37286551-37287079	NONHSAT101059
11	lnc-WDR70-5	chr5:37254685-37254730	NONHSAT101057
12	lnc-WDR70-5	chr5:37248948-37249323	NONHSAT101057
13	lnc-NUP155-3	chr5:37170143-37170433	NONHSAT101055
14	lnc-C5orf42-1	chr5:37071723-37071753	XLOC_004787
15	lnc-NIPBL-2	chr5:37069211-37069517	NONHSAT101048
16	lnc-SLC1A3-1	chr5:36907214-36907754	l_2904_chr5:36907213-36912362_kidney
17	lnc-NUP155-3	chr5:37169634-37169663	NONHSAT101055
18	lnc-NIPBL-3	chr5:37066696-37066722	NONHSAT101047
19	lnc-NUP155-2	chr5:37246277-37246581	NONHSAT101056
20	lnc-NIPBL-3	chr5:37067383-37069132	NONHSAT101047
21	lnc-WDR70-5	chr5:37249174-37249323	NONHSAT101058
22	lnc-NUP155-6	chr5:37138788-37138950	NONHSAT101053
23	lnc-NUP155-3	chr5:37176011-37176201	NONHSAT101055
24	lnc-WDR70-5	chr5:37250499-37250654	NONHSAT101058
25	lnc-NIPBL-5	chr5:37130532-37130802	NONHSAT101052

No data

(count:13 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location
1	NIPBL	hsa-miR-21-5p	chr5:37064911-37064931
2	NIPBL	hsa-miR-30b-5p	chr5:37065219-37065240
3	NIPBL	hsa-miR-421	chr5:37065629-37065651
4	NIPBL	hsa-miR-421	chr5:37065423-37065444
5	NIPBL	hsa-miR-183-5p	chr5:37065853-37065875
6	NIPBL	hsa-let-7b-5p	chr5:36996581-36996603
7	NIPBL	hsa-miR-421	chr5:37065437-37065444
8	NIPBL	hsa-miR-30b-5p	chr5:37065628-37065652
9	NIPBL	hsa-miR-421	chr5:37065244-37065266
10	NIPBL	hsa-miR-30b-5p	chr5:37065246-37065267
11	NIPBL	hsa-miR-183-5p	chr5:36996864-36996887
12	NIPBL	hsa-let-7a-5p	chr5:36996581-36996603
13	NIPBL	hsa-miR-30b-5p	chr5:37065714-37065735

Variant related genes	Relation type
RPS4XP6	TF binding region
OFD1P17	TF binding region
NIPBL	TF binding region
ENSG00000270558	TF binding region
C5orf42	TF binding region
ENSG00000271378	TF binding region
RN7SL37P	TF binding region
NUP155	TF binding region
RPS4XP6	CpG island
OFD1P17	CpG island
NIPBL	CpG island
ENSG00000270558	CpG island
C5orf42	CpG island
ENSG00000271378	CpG island
RN7SL37P	CpG island
NUP155	CpG island
ENSG00000228212	chromatin interactions
ENSG00000214770	chromatin interactions
ENSG00000188825	chromatin interactions
ENSG00000079999	chromatin interactions
ENSG00000244073	chromatin interactions
ENSG00000242493	chromatin interactions
ENSG00000196459	chromatin interactions
ENSG00000046651	chromatin interactions
ENSG00000111142	chromatin interactions
ENSG00000259895	chromatin interactions
ENSG00000250133	chromatin interactions
ENSG00000244165	chromatin interactions
ENSG00000108106	chromatin interactions
ENSG00000164190	chromatin interactions
ENSG00000249850	chromatin interactions
ENSG00000197603	chromatin interactions
ENSG00000271378	chromatin interactions
ENSG00000180806	chromatin interactions
ENSG00000149273	chromatin interactions
ENSG00000184348	chromatin interactions
ENSG00000110721	chromatin interactions
ENSG00000105514	chromatin interactions
ENSG00000113569	chromatin interactions
ENSG00000211455	chromatin interactions
ENSG00000243989	chromatin interactions
ENSG00000114779	chromatin interactions

Extended variants
information (count: 14353 )
Associated
traits (count: 103 )

Variant overlapped rSNPs/rCNVs (count:14353 , 50 per page) page: 1 2 3 4 5 6 7 ... 288

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs532227937	chr5:36899741-36899742	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
2	rs149259064	chr5:36899818-36899819	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
3	rs568993608	chr5:36899828-36899829	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs536402219	chr5:36899884-36899885	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs548413790	chr5:36899921-36899922	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
6	rs566643425	chr5:36899946-36899947	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs117854925	chr5:36899951-36899952	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs377266274	chr5:36900023-36900024	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
9	rs111738413	chr5:36900059-36900060	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
10	rs114920098	chr5:36900089-36900090	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
11	rs567096183	chr5:36900093-36900094	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
12	rs570791718	chr5:36900158-36900159	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
13	rs371204327	chr5:36900207-36900208	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
14	rs537871094	chr5:36900251-36900252	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
15	rs183893868	chr5:36900287-36900288	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
16	rs556193116	chr5:36900296-36900297	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs574602905	chr5:36900325-36900326	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs77399964	chr5:36900393-36900394	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs540608522	chr5:36900419-36900420	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs554395007	chr5:36900454-36900455	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs535445691	chr5:36900466-36900467	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs114226824	chr5:36900485-36900486	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs546512383	chr5:36900494-36900495	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs114885202	chr5:36900511-36900512	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs11956853	chr5:36900550-36900551	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
26	rs548921975	chr5:36900615-36900616	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs544226846	chr5:36900627-36900628	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs568935273	chr5:36900664-36900665	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs562527739	chr5:36900677-36900678	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs529855310	chr5:36900698-36900699	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs548079905	chr5:36900729-36900730	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs566686123	chr5:36900773-36900774	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs536806432	chr5:36900774-36900775	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs537917692	chr5:36900793-36900794	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs188677555	chr5:36900820-36900821	ZNF genes & repeats Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs558006838	chr5:36900823-36900824	ZNF genes & repeats Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs375297039	chr5:36900826-36900827	ZNF genes & repeats Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs293748	chr5:36900843-36900844	ZNF genes & repeats Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance disease
39	rs80060072	chr5:36900855-36900856	ZNF genes & repeats Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs180729523	chr5:36900869-36900870	ZNF genes & repeats Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs568214919	chr5:36900884-36900885	ZNF genes & repeats Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs535583667	chr5:36900897-36900898	ZNF genes & repeats Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs75053397	chr5:36900936-36900937	ZNF genes & repeats Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs531686849	chr5:36900958-36900959	ZNF genes & repeats Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs113024524	chr5:36900964-36900965	ZNF genes & repeats Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs143502998	chr5:36900967-36900968	ZNF genes & repeats Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs546099773	chr5:36900981-36900982	ZNF genes & repeats Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs184434847	chr5:36900984-36900985	ZNF genes & repeats Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs576815996	chr5:36901041-36901042	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs544218283	chr5:36901050-36901051	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:103)

Disease	PMID	Source
Myofibroblastic sarcoma	19369631	CNVD
Cervical squamous cell carcinoma	21590768	CNVD
Non-small cell lung cancer	20864512	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	21080181	CNVD
Medulloblastoma	16783165	CNVD
Thyroid cancer	19087340	CNVD
Liposarcoma	21253554	CNVD
Pancreatic endocrine tumor	17639061	CNVD
Cervical Cancer	21857958	CNVD
Cervical cancer	21062161	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	19960244	CNVD
Oral cancer	21386901	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Ewing''s sarcoma	17952124	CNVD
Malignant mesothelioma	18160781	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Cervical cancer	18559093	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Metanephric adenoma	20802469	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Medulloblastoma	21979893	CNVD
Phyllodes tumor	17334353	CNVD
Malaria	21533027	CNVD
Renal cell carcinoma	19461508	CNVD
Colorectal cancer	21645411	CNVD
Gastric cancer	22152101	CNVD
Oesophago-gastric ulcer	22152101	CNVD
Ovarian cancer	21781307	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Cancer	20164919	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Multiple myeloma	17550852	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Bladder cancer	21909424	CNVD
DNA damage stimulus	22844521	CNVD
DNA repair	22844521	CNVD
Breast cancer	21785460	CNVD
Spinal muscular atrophy	22422766	CNVD
Spinal muscular atrophy	22558076	CNVD
Spinal muscular atrophy	21320981	CNVD
Spinal muscular atrophy	21762474	CNVD
Breast cancer	21858162	CNVD
Esophageal adenocarcinoma	19417022	CNVD
Cancer	16751803	CNVD
Breast cancer	16608533	CNVD
Autism	22495311	CNVD
Melanoma	18172304	CNVD
Non-syndromic sensorineural hearing loss	20606397	CNVD
Intellectual disability	22102821	CNVD
Prostate cancer	21965145	CNVD
Cancer	21183584	CNVD
Ovarian cancer	20844748	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Breast cancer	17603634	CNVD
Non-small cell lung cancer	19010865	CNVD
Glioblastoma multiforme	22286061	CNVD
Ovarian cancer	21720365	CNVD
Lung cancer	18438408	CNVD
Glioma	20126413	CNVD
Non-small cell lung cancer	21829676	CNVD
Breast cancer	22032731	CNVD
Esophageal cancer	20955586	CNVD
Prostate cancer	18632612	CNVD
Medulloblastoma	19270706	CNVD
Breast cancer	19553991	CNVD
Lung cancer	19553991	CNVD
Melanoma	19553991	CNVD
Ovarian cancer	19553991	CNVD
Prostate cancer	19553991	CNVD
Non-small cell lung cancer	17156491	CNVD
Breast cancer	17133270	CNVD
Congenital anomalies of the kidney and urinary tract	18694510	CNVD
Breast cancer	17393978	CNVD
Pleomorphic liposarcoma	18784837	CNVD
Acute lymphoblastic leukemia	17640729	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Lung cancer	19153074	CNVD
Breast cancer	21364760	CNVD
Cornelia de Lange syndrome	21085971	CNVD
Autism	21701786	CNVD
Cervical cancer	16585170	CNVD
Ovarian clear cell carcinoma	19293255	CNVD
Hodgkin''s lymphoma	17606441	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Autism	22549408	CNVD
Schizophrenia	23813976	CNVD

Chromatin state (count:9223 , 50 per page) page: 1 2 3 4 5 6 7 ... 185

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:36881000-36899800	Weak transcription	Brain Substantia Nigra	brain
2	chr5:36881000-36900600	Weak transcription	Osteobl	bone
3	chr5:36881200-36900400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
4	chr5:36882400-36899800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
5	chr5:36886400-36900400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
6	chr5:36886400-36904800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
7	chr5:36886600-36899800	Weak transcription	Brain Angular Gyrus	brain
8	chr5:36886600-36904800	Weak transcription	Right Ventricle	heart
9	chr5:36886600-36909200	Weak transcription	Left Ventricle	heart
10	chr5:36886600-36910400	Weak transcription	Ovary	ovary
11	chr5:36888200-36902400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
12	chr5:36888200-36910400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
13	chr5:36888600-36899800	Weak transcription	Rectal Smooth Muscle	rectum
14	chr5:36888800-36911000	Weak transcription	Fetal Lung	lung
15	chr5:36889600-36901200	Weak transcription	Primary B cells from peripheral blood	blood
16	chr5:36892200-36901600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
17	chr5:36894600-36900000	Enhancers	Primary T helper cells fromperipheralblood	blood
18	chr5:36895400-36900800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
19	chr5:36895800-36902200	Weak transcription	Primary B cells from cord blood	blood
20	chr5:36895800-36918800	Weak transcription	Small Intestine	intestine
21	chr5:36895800-36928600	Weak transcription	HSMM	muscle
22	chr5:36896000-36900400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
23	chr5:36896200-36908000	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
24	chr5:36896400-36904600	Weak transcription	Primary T cells from cord blood	blood
25	chr5:36896600-36904400	Weak transcription	Sigmoid Colon	Sigmoid Colon
26	chr5:36896800-36900000	Weak transcription	Monocytes-CD14+_RO01746	blood
27	chr5:36897000-36900200	Weak transcription	Primary monocytes fromperipheralblood	blood
28	chr5:36897400-36901000	Enhancers	Fetal Heart	heart
29	chr5:36897400-36904200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
30	chr5:36897600-36901800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
31	chr5:36897800-36903600	Weak transcription	NHLF	lung
32	chr5:36898000-36899800	Weak transcription	NHDF-Ad	bronchial
33	chr5:36898000-36900400	Weak transcription	GM12878-XiMat	blood
34	chr5:36898000-36900600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
35	chr5:36898000-36902800	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
36	chr5:36898000-36907200	Weak transcription	Stomach Mucosa	stomach
37	chr5:36898200-36900600	Enhancers	Primary T helper cells PMA-I stimulated	--
38	chr5:36898200-36901200	Enhancers	Primary neutrophils fromperipheralblood	blood
39	chr5:36898400-36899800	Weak transcription	A549	lung
40	chr5:36898400-36900000	Weak transcription	Brain Anterior Caudate	brain
41	chr5:36898400-36905600	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
42	chr5:36898600-36899800	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
43	chr5:36898600-36900000	Weak transcription	Duodenum Smooth Muscle	Duodenum
44	chr5:36899000-36900400	Weak transcription	Psoas Muscle	Psoas
45	chr5:36899000-36904200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
46	chr5:36899000-36926400	Weak transcription	Gastric	stomach
47	chr5:36899200-36900000	Enhancers	Primary T killer naive cells fromperipheralblood	blood
48	chr5:36899200-36900000	Enhancers	Liver	Liver
49	chr5:36899200-36900000	Enhancers	Skeletal Muscle Male	skeletal muscle
50	chr5:36899200-36900200	Enhancers	Primary T killer memory cells from peripheral blood	blood

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