Variant report

Variant nsv537880
Chromosome Location chr5:117900051-118027895
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:209 , 50 per page) page: 1 2 3 4 5
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:117895200-117901200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr5:117895800-117900600 Weak transcription Brain Germinal Matrix brain
3 chr5:117896000-117901000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
4 chr5:117897400-117900200 Enhancers Fetal Heart heart
5 chr5:117898000-117900600 Weak transcription Fetal Brain Male brain
6 chr5:117900600-117900800 Enhancers Brain Germinal Matrix brain
7 chr5:117900600-117901000 Enhancers Fetal Brain Male brain
8 chr5:117900600-117901600 Enhancers Cortex derived primary cultured neurospheres brain
9 chr5:117900800-117901200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
10 chr5:117900800-117901200 Weak transcription Brain Germinal Matrix brain
11 chr5:117901000-117902000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
12 chr5:117901200-117902000 Enhancers Brain Germinal Matrix brain
13 chr5:117901200-117902200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr5:117901400-117902200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr5:117901400-117902200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
16 chr5:117901600-117901800 Weak transcription HMEC breast
17 chr5:117901800-117902000 Enhancers HMEC breast
18 chr5:117902000-117904400 Weak transcription HMEC breast
19 chr5:117902200-117904400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr5:117904400-117904800 ZNF genes & repeats Aorta Aorta
21 chr5:117904400-117906400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr5:117904400-117906400 Enhancers HMEC breast
23 chr5:117904800-117905600 Weak transcription Aorta Aorta
24 chr5:117907200-117907600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
25 chr5:117907400-117915800 Weak transcription Ovary ovary
26 chr5:117911600-117912200 Enhancers Aorta Aorta
27 chr5:117912200-117913400 Weak transcription Aorta Aorta
28 chr5:117913200-117914600 Enhancers Right Atrium heart
29 chr5:117913200-117914800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
30 chr5:117913200-117914800 Enhancers Fetal Muscle Leg muscle
31 chr5:117913200-117915600 Enhancers Breast Myoepithelial Primary Cells Breast
32 chr5:117913400-117914600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr5:117913400-117914600 Enhancers Aorta Aorta
34 chr5:117913400-117915600 Enhancers HSMMtube muscle
35 chr5:117913600-117914800 Enhancers Skeletal Muscle Female skeletal muscle
36 chr5:117913800-117914400 Enhancers Cortex derived primary cultured neurospheres brain
37 chr5:117913800-117914600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr5:117914000-117914400 Enhancers Brain Substantia Nigra brain
39 chr5:117914000-117914600 Enhancers Brain Hippocampus Middle brain
40 chr5:117914000-117914600 Enhancers Fetal Lung lung
41 chr5:117914200-117914800 Enhancers Brain Inferior Temporal Lobe brain
42 chr5:117914400-117914800 Enhancers Skeletal Muscle Male skeletal muscle
43 chr5:117914400-117916000 Enhancers Psoas Muscle Psoas
44 chr5:117914600-117915800 Weak transcription Right Atrium heart
45 chr5:117914600-117916000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr5:117914600-117916000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
47 chr5:117914600-117916200 Weak transcription Fetal Lung lung
48 chr5:117914800-117915800 Weak transcription Fetal Muscle Leg muscle
49 chr5:117915600-117916000 Weak transcription Breast Myoepithelial Primary Cells Breast
50 chr5:117915600-117916400 Weak transcription HSMMtube muscle

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