| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
rs555670308 |
chr5:180229050-180229051 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription
|
Chromatin interactive region
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
| 2 |
rs77643672 |
chr5:180229067-180229068 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription
|
Chromatin interactive region
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
| 3 |
rs144396886 |
chr5:180229076-180229077 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription
|
Chromatin interactive region
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
| 4 |
rs558399148 |
chr5:180229091-180229092 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription
|
Chromatin interactive region
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
| 5 |
rs34984174 |
chr5:180229115-180229116 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription
|
Chromatin interactive region
|
16 gene(s)
|
Overlapped CNVs
|
n/a
|
| 6 |
rs11283630 |
chr5:180229120-180229121 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription
|
Chromatin interactive region
|
16 gene(s)
|
Overlapped CNVs
|
n/a
|
| 7 |
rs75995500 |
chr5:180229124-180229125 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription
|
Chromatin interactive region
|
16 gene(s)
|
Overlapped CNVs
|
n/a
|
| 8 |
rs200921417 |
chr5:180229125-180229126 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription
|
Chromatin interactive region
|
16 gene(s)
|
Overlapped CNVs
|
n/a
|
| 9 |
rs201925235 |
chr5:180229129-180229130 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription
|
Chromatin interactive region
|
16 gene(s)
|
Overlapped CNVs
|
n/a
|
| 10 |
rs372491603 |
chr5:180229141-180229142 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription
|
Chromatin interactive region
|
18 gene(s)
|
Overlapped CNVs
|
n/a
|
| 11 |
rs78615156 |
chr5:180229183-180229184 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription
|
Chromatin interactive region
|
19 gene(s)
|
Overlapped CNVs
|
n/a
|
| 12 |
rs545770774 |
chr5:180229209-180229210 |
Active TSS Flanking Active TSS Weak transcription
|
Chromatin interactive region
|
19 gene(s)
|
Overlapped CNVs
|
n/a
|
| 13 |
rs546640451 |
chr5:180229233-180229234 |
Active TSS Flanking Active TSS Weak transcription
|
Chromatin interactive region
|
19 gene(s)
|
Overlapped CNVs
|
n/a
|
| 14 |
rs562581404 |
chr5:180229234-180229235 |
Active TSS Flanking Active TSS Weak transcription
|
Chromatin interactive region
|
19 gene(s)
|
Overlapped CNVs
|
n/a
|
| 15 |
rs576196782 |
chr5:180229245-180229246 |
Active TSS Flanking Active TSS Weak transcription
|
Chromatin interactive region
|
19 gene(s)
|
Overlapped CNVs
|
n/a
|
| 16 |
rs564220640 |
chr5:180229337-180229338 |
Active TSS Flanking Active TSS Weak transcription
|
Chromatin interactive region
|
19 gene(s)
|
Overlapped CNVs
|
n/a
|
| 17 |
rs542055793 |
chr5:180229356-180229357 |
Active TSS Flanking Active TSS Weak transcription
|
Chromatin interactive region
|
19 gene(s)
|
Overlapped CNVs
|
n/a
|
| 18 |
rs561709797 |
chr5:180229401-180229402 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
Chromatin interactive region
|
19 gene(s)
|
Overlapped CNVs
|
n/a
|
| 19 |
rs527617601 |
chr5:180229455-180229456 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
Chromatin interactive region
|
19 gene(s)
|
Overlapped CNVs
|
n/a
|
| 20 |
rs547389025 |
chr5:180229456-180229457 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
Chromatin interactive region
|
19 gene(s)
|
Overlapped CNVs
|
n/a
|
| 21 |
rs35736685 |
chr5:180229462-180229463 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
Chromatin interactive region
|
19 gene(s)
|
Overlapped CNVs
|
n/a
|
| 22 |
rs564010551 |
chr5:180229466-180229467 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
Chromatin interactive region
|
19 gene(s)
|
Overlapped CNVs
|
n/a
|
| 23 |
rs560553970 |
chr5:180229529-180229530 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
Chromatin interactive regionlncRNA
|
18 gene(s)
|
Overlapped CNVs
|
n/a
|
| 24 |
rs181758617 |
chr5:180229554-180229555 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
Chromatin interactive regionlncRNA
|
17 gene(s)
|
Overlapped CNVs
|
n/a
|
| 25 |
rs185338514 |
chr5:180229598-180229599 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
Chromatin interactive region
|
17 gene(s)
|
Overlapped CNVs
|
n/a
|
| 26 |
rs569852827 |
chr5:180229712-180229713 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Enhancers Weak transcription
|
Chromatin interactive regionlncRNA
|
18 gene(s)
|
Overlapped CNVs
|
n/a
|
| 27 |
rs375182038 |
chr5:180229729-180229730 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Enhancers Weak transcription
|
Chromatin interactive regionlncRNA
|
18 gene(s)
|
Overlapped CNVs
|
n/a
|
| 28 |
rs549591035 |
chr5:180229756-180229757 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Enhancers Weak transcription
|
Chromatin interactive regionlncRNA
|
17 gene(s)
|
Overlapped CNVs
|
n/a
|
| 29 |
rs573316374 |
chr5:180229757-180229758 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Enhancers Weak transcription
|
Chromatin interactive regionlncRNA
|
17 gene(s)
|
Overlapped CNVs
|
n/a
|
| 30 |
rs566160023 |
chr5:180229762-180229763 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Enhancers Weak transcription
|
Chromatin interactive regionlncRNA
|
16 gene(s)
|
Overlapped CNVs
|
n/a
|
| 31 |
rs2626812 |
chr5:180229767-180229768 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Enhancers Weak transcription
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
17 gene(s)
|
Overlapped CNVs
|
n/a
|
| 32 |
rs535191968 |
chr5:180229869-180229870 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
| 33 |
rs532856548 |
chr5:180229886-180229887 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
| 34 |
rs532666876 |
chr5:180229894-180229895 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
| 35 |
rs62407767 |
chr5:180229896-180229897 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
| 36 |
rs578240050 |
chr5:180229912-180229913 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
| 37 |
rs552862964 |
chr5:180229913-180229914 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
| 38 |
rs539481656 |
chr5:180229923-180229924 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
| 39 |
rs72549455 |
chr5:180229936-180229937 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
| 40 |
rs62407768 |
chr5:180229950-180229951 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
| 41 |
rs72549454 |
chr5:180229964-180229965 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
| 42 |
rs62407769 |
chr5:180229966-180229967 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
| 43 |
rs368985763 |
chr5:180229983-180229984 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
| 44 |
rs150935626 |
chr5:180230034-180230035 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers
|
TF binding regionCpG islandChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
| 45 |
rs3806861 |
chr5:180230104-180230105 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
| 46 |
rs3806862 |
chr5:180230235-180230236 |
Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Genic enhancers
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
| 47 |
rs59328476 |
chr5:180230239-180230240 |
Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Genic enhancers
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
| 48 |
rs190145998 |
chr5:180230251-180230252 |
Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Genic enhancers
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
| 49 |
rs74675058 |
chr5:180230318-180230319 |
Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Genic enhancers
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
| 50 |
rs563317860 |
chr5:180230355-180230356 |
Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Genic enhancers
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|