Variant report

Variant	nsv5383
Chromosome Location	chr6:86303223-86348023
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1900)
CpG islands
(count:977)
Chromatin interactive
region (count:107)
LncRNA
region (count:9)
Mature miRNA
region (count: 0)
miRNA target
sites (count:8)

(count:1900 , 50 per page) page: 1 2 3 4 5 6 7 ... 38

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr6:86303147-86303951	HepG2	liver:	n/a	n/a
2	ARID3A	chr6:86303651-86304076	K562	blood:	n/a	n/a
3	ARID3A	chr6:86347090-86347191	K562	blood:	n/a	n/a
4	ATF1	chr6:86302930-86304097	K562	blood:	n/a	n/a
5	ATF2	chr6:86303443-86304058	GM12878	blood:	n/a	n/a
6	ATF2	chr6:86303174-86304145	GM12878	blood:	n/a	n/a
7	ATF3	chr6:86303472-86303926	K562	blood:	n/a	n/a
8	ATF3	chr6:86303523-86303985	K562	blood:	n/a	n/a
9	BACH1	chr6:86303341-86303819	K562	blood:	n/a	n/a
10	BACH1	chr6:86303149-86304311	H1-hESC	embryonic stem cell:	n/a	n/a
11	BCL3	chr6:86303192-86304290	A549	lung:	n/a	chr6:86303877-86303890
12	BCL3	chr6:86303182-86304153	GM12878	blood:	n/a	chr6:86303877-86303890
13	BCL3	chr6:86303130-86304600	A549	lung:	n/a	chr6:86304328-86304337 chr6:86303877-86303890
14	BCL3	chr6:86321891-86323853	K562	blood:	n/a	n/a
15	BCLAF1	chr6:86303514-86304059	K562	blood:	n/a	chr6:86303877-86303890
16	BCLAF1	chr6:86302945-86304489	GM12878	blood:	n/a	chr6:86304328-86304337 chr6:86303877-86303890
17	BCLAF1	chr6:86302737-86304189	GM12878	blood:	n/a	chr6:86303877-86303890
18	BCLAF1	chr6:86303382-86304101	K562	blood:	n/a	chr6:86303877-86303890
19	BHLHE40	chr6:86302896-86304488	GM12878	blood:	n/a	n/a
20	BHLHE40	chr6:86302752-86304466	K562	blood:	n/a	n/a
21	BHLHE40	chr6:86302952-86303999	HepG2	liver:	n/a	n/a
22	BHLHE40	chr6:86303506-86303846	A549	lung:	n/a	n/a
23	BRCA1	chr6:86303252-86303610	HepG2	liver:	n/a	n/a
24	BRCA1	chr6:86303302-86303968	GM12878	blood:	n/a	n/a
25	BRCA1	chr6:86303844-86303894	HepG2	liver:	n/a	n/a
26	BRCA1	chr6:86303097-86304028	Hela-S3	cervix:	n/a	n/a
27	CBX3	chr6:86302468-86304228	K562	blood:	n/a	n/a
28	CCNT2	chr6:86317621-86317920	K562	blood:	n/a	n/a
29	CCNT2	chr6:86314039-86314239	K562	blood:	n/a	n/a
30	CCNT2	chr6:86320460-86320679	K562	blood:	n/a	n/a
31	CCNT2	chr6:86302926-86304172	K562	blood:	n/a	chr6:86304122-86304131 chr6:86303987-86303996 chr6:86303103-86303112
32	CCNT2	chr6:86309901-86310283	K562	blood:	n/a	n/a
33	CCNT2	chr6:86319379-86319801	K562	blood:	n/a	n/a
34	CEBPB	chr6:86323647-86323922	IMR90	lung:	n/a	chr6:86323787-86323804 chr6:86323788-86323801
35	CEBPB	chr6:86307576-86307791	HepG2	liver:	n/a	chr6:86307693-86307704
36	CEBPB	chr6:86303342-86304007	IMR90	lung:	n/a	n/a
37	CEBPB	chr6:86303567-86303979	H1-hESC	embryonic stem cell:	n/a	n/a
38	CEBPB	chr6:86309785-86309980	IMR90	lung:	n/a	n/a
39	CEBPB	chr6:86323624-86323934	HepG2	liver:	n/a	chr6:86323787-86323804 chr6:86323788-86323801
40	CEBPB	chr6:86302930-86304368	Hela-S3	cervix:	n/a	chr6:86304352-86304365
41	CEBPB	chr6:86303633-86303944	K562	blood:	n/a	n/a
42	CEBPB	chr6:86303593-86304033	K562	blood:	n/a	n/a
43	CEBPB	chr6:86303658-86303973	HepG2	liver:	n/a	n/a
44	CEBPB	chr6:86337160-86337196	HepG2	liver:	n/a	n/a
45	CEBPB	chr6:86325992-86326202	K562	blood:	n/a	n/a
46	CEBPD	chr6:86303289-86304091	K562	blood:	n/a	n/a
47	CEBPD	chr6:86303269-86303931	HepG2	liver:	n/a	n/a
48	CHD1	chr6:86334923-86334954	GM12878	blood:	n/a	n/a
49	CHD1	chr6:86302833-86304615	GM12878	blood:	n/a	n/a
50	CHD1	chr6:86303287-86303302	H1-hESC	embryonic stem cell:	n/a	n/a

(count:977 , 50 per page) page: 1 2 3 4 5 6 7 ... 20

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:86324743-86324793	IMR90	lung:	fetal
2	chr6:86324743-86324793	IMR90	lung:	fetal
3	chr6:86303887-86303937	A549	lung:	n/a
4	chr6:86303732-86303782	AG10803	skin:	n/a
5	chr6:86303887-86303937	GM12878	blood:	n/a
6	chr6:86303744-86303794	RPTEC	kidney:	n/a
7	chr6:86303884-86303934	SK-N-SH	brain:	n/a
8	chr6:86303669-86303719	AG09309	skin:	n/a
9	chr6:86303771-86303821	H1-hESC	embryonic stem cell:	embryo
10	chr6:86303462-86303512	HRPEpiC	eye:	n/a
11	chr6:86303781-86303831	NB4	blood:	n/a
12	chr6:86303781-86303831	GM19239	blood:	n/a
13	chr6:86332371-86332421	T-47D	breast:	n/a
14	chr6:86303462-86303512	ECC-1	luminal epithelium:	n/a
15	chr6:86307053-86307103	HRPEpiC	eye:	n/a
16	chr6:86303781-86303831	A549	lung:	n/a
17	chr6:86303781-86303831	HCF	heart:	n/a
18	chr6:86303781-86303831	SAEC	small airway:	n/a
19	chr6:86324743-86324793	K562	blood:	n/a
20	chr6:86303884-86303934	NB4	blood:	n/a
21	chr6:86303781-86303831	HCT-116	colon:	n/a
22	chr6:86324303-86324353	HAEpiC	amniotic membrane:	n/a
23	chr6:86324303-86324353	SAEC	small airway:	n/a
24	chr6:86303884-86303934	HL-60	blood:	n/a
25	chr6:86303771-86303821	CMK	blood:	n/a
26	chr6:86303884-86303934	K562	blood:	n/a
27	chr6:86332371-86332421	U87	brain:	n/a
28	chr6:86303767-86303817	GM19239	blood:	n/a
29	chr6:86303744-86303794	PrEC	prostate:	n/a
30	chr6:86332371-86332421	PANC-1	pancreas:	n/a
31	chr6:86303669-86303719	NHDF-neo	bronchial:	n/a
32	chr6:86303771-86303821	U87	brain:	n/a
33	chr6:86324303-86324353	H1-hESC	embryonic stem cell:	embryo
34	chr6:86303781-86303831	NHDF-neo	bronchial:	n/a
35	chr6:86303884-86303934	Hepatocyte	liver:	n/a
36	chr6:86303771-86303821	GM12891	blood:	n/a
37	chr6:86303462-86303512	NHBE	bronchial:	n/a
38	chr6:86324743-86324793	ECC-1	luminal epithelium:	n/a
39	chr6:86303887-86303937	SK-N-SH	brain:	n/a
40	chr6:86303781-86303831	MCF10A-Er-Src	breast:	n/a
41	chr6:86303884-86303934	HRCEpiC	kidney:	n/a
42	chr6:86304180-86304230	HAEpiC	amniotic membrane:	n/a
43	chr6:86324743-86324793	HCT-116	colon:	n/a
44	chr6:86303744-86303794	MCF-7	breast:	n/a
45	chr6:86304180-86304230	HRE	kidney:	n/a
46	chr6:86303887-86303937	HRE	kidney:	n/a
47	chr6:86307053-86307103	ECC-1	luminal epithelium:	n/a
48	chr6:86303771-86303821	HMEC	breast:	n/a
49	chr6:86307053-86307103	HPAEpiC	pulmonary alveolar:	n/a
50	chr6:86324687-86324737	Hepatocyte	liver:	n/a

(count:107 , 50 per page) page: 1 2 3

No.	Distal block	Cell Line	Cell type
1	chr6:86316554..86318290-chr6:86332242..86335078,2	MCF-7	breast:
2	chr6:86341603..86343165-chr6:86387354..86389820,2	K562	blood:
3	chr6:86298349..86307534-chr6:86383938..86391964,31	K562	blood:
4	chr6:86321046..86323289-chr6:86331430..86333692,2	K562	blood:
5	chr6:86325842..86327859-chr6:86341248..86343719,3	K562	blood:
6	chr6:86324425..86325943-chr6:86344870..86347328,2	K562	blood:
7	chr6:86308147..86310058-chr6:86348388..86350658,2	K562	blood:
8	chr6:86319190..86321396-chr6:86352673..86354664,2	K562	blood:
9	chr6:86301714..86305650-chr6:86315501..86320547,9	MCF-7	breast:
10	chr6:86313191..86316994-chr6:86351598..86354034,4	MCF-7	breast:
11	chr6:86323280..86334231-chr6:86380512..86390230,24	K562	blood:
12	chr6:86303128..86306489-chr6:86334387..86338119,4	MCF-7	breast:
13	chr19:14247915..14248484-chr6:86303079..86303653,2	Hela-S3	cervix:
14	chr6:86319220..86322208-chr6:86328498..86330402,2	MCF-7	breast:
15	chr6:86300873..86305245-chr6:86347697..86356641,19	K562	blood:
16	chr6:86311582..86314497-chr6:86315059..86318512,4	MCF-7	breast:
17	chr6:86326511..86329111-chr6:86347081..86350058,3	K562	blood:
18	chr6:86314714..86316790-chr6:86327729..86330292,2	MCF-7	breast:
19	chr6:86252970..86257934-chr6:86299533..86304034,5	K562	blood:
20	chr6:86300286..86310605-chr6:86384413..86390498,39	K562	blood:
21	chr6:86326728..86328514-chr6:86337033..86340056,3	MCF-7	breast:
22	chr6:86319220..86322208-chr6:86328498..86330402,2	MCF-7	breast:
23	chr6:86307722..86311863-chr6:86387029..86388748,3	MCF-7	breast:
24	chr6:86335571..86337381-chr6:86386985..86388546,2	K562	blood:
25	chr6:86314738..86316699-chr6:86350227..86354147,4	MCF-7	breast:
26	chr6:43026849..43027616-chr6:86303059..86303707,2	Hela-S3	cervix:
27	chr6:86300873..86305245-chr6:86347697..86356641,19	K562	blood:
28	chr6:86307661..86310525-chr6:86316183..86318206,2	MCF-7	breast:
29	chr6:86308091..86310509-chr6:86386844..86389781,5	K562	blood:
30	chr6:86321046..86323289-chr6:86331430..86333692,2	K562	blood:
31	chr6:86302271..86307129-chr6:86385631..86390073,11	MCF-7	breast:
32	chr6:86332635..86335527-chr6:86336788..86338343,3	K562	blood:
33	chr6:86303002..86303617-chr9:100745459..100746459,2	Hela-S3	cervix:
34	chr6:86245425..86248526-chr6:86302419..86304294,3	MCF-7	breast:
35	chr6:86320927..86325872-chr6:86334691..86337945,4	K562	blood:
36	chr1:63832950..63833773-chr6:86303351..86304176,2	NB4	blood:
37	chr6:86305165..86307421-chr6:86382210..86384940,3	MCF-7	breast:
38	chr6:86307661..86310525-chr6:86316183..86318206,2	MCF-7	breast:
39	chr6:86342168..86343867-chr6:86346506..86348145,2	MCF-7	breast:
40	chr6:86333946..86338132-chr6:86385754..86388640,4	MCF-7	breast:
41	chr6:86334874..86337381-chr6:86386304..86388485,2	K562	blood:
42	chr6:86306095..86308167-chr6:86335617..86337326,2	K562	blood:
43	chr6:86322096..86325209-chr6:86349720..86353694,5	K562	blood:
44	chr6:86301325..86305014-chr6:86385299..86388840,4	MCF-7	breast:
45	chr16:28936701..28937234-chr6:86303014..86303832,2	Hela-S3	cervix:
46	chr6:86330267..86332426-chr6:86382274..86384096,2	K562	blood:
47	chr6:86314222..86316088-chr6:86388008..86389678,2	K562	blood:
48	chr6:86325909..86328765-chr6:86352147..86353891,2	K562	blood:
49	chr6:86314135..86315722-chr6:86388008..86389751,2	K562	blood:
50	chr6:86324041..86326857-chr6:86327434..86330198,2	K562	blood:

(count:9 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-SNX14-3	chr6:86304945-86305442	NONHSAT113844
2	lnc-SNX14-3	chr6:86307939-86309022	NONHSAT113844
3	lnc-SNX14-3	chr6:86314009-86314123	NONHSAT113844
4	lnc-SNX14-3	chr6:86306552-86307606	NONHSAT113844
5	lnc-SNX14-3	chr6:86305598-86305643	NONHSAT113844
6	lnc-SNX14-3	chr6:86307647-86307791	NONHSAT113844
7	lnc-NT5E-1	chr6:86340080-86340995	ENSG00000236016.3
8	lnc-NT5E-1	chr6:86340107-86340251	ENSG00000236016.1
9	lnc-NT5E-1	chr6:86340433-86340841	ENSG00000236016.1

No data

(count:8 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location
1	SYNCRIP	hsa-miR-29a-3p	chr6:86320464-86320458
2	SYNCRIP	hsa-miR-26b-5p	chr6:86319204-86319227
3	SYNCRIP	hsa-miR-26b-5p	chr6:86320064-86320085
4	SYNCRIP	hsa-miR-26b-5p	chr6:86323980-86323999
5	SYNCRIP	hsa-miR-148b-3p	chr6:86319993-86320012
6	SYNCRIP	hsa-miR-148b-3p	chr6:86319999-86319993
7	SYNCRIP	hsa-miR-375	chr6:86324328-86324350
8	SYNCRIP	hsa-miR-29a-3p	chr6:86320659-86320678

Variant related genes	Relation type
ENSG00000271793	TF binding region
ENSG00000236016	TF binding region
SNX14	TF binding region
ENSG00000271793	CpG island
ENSG00000236016	CpG island
SNX14	CpG island
ENSG00000112651	chromatin interactions
ENSG00000220563	chromatin interactions
ENSG00000135317	chromatin interactions
ENSG00000107614	chromatin interactions
ENSG00000136938	chromatin interactions
ENSG00000271793	chromatin interactions
ENSG00000088035	chromatin interactions
ENSG00000137171	chromatin interactions
ENSG00000267169	chromatin interactions
ENSG00000135316	chromatin interactions
ENSG00000177548	chromatin interactions
ENSG00000203875	chromatin interactions
ENSG00000236016	chromatin interactions

Extended variants
information (count: 1776 )
Associated
traits (count: 106 )

Variant overlapped rSNPs/rCNVs (count:1776 , 50 per page) page: 1 2 3 4 5 6 7 ... 36

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs114417373	chr6:86303240-86303241	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
2	rs140612751	chr6:86303265-86303266	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
3	rs199589393	chr6:86303272-86303273	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
4	rs543061539	chr6:86303282-86303283	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
5	rs377092960	chr6:86303283-86303284	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
6	rs201894576	chr6:86303285-86303286	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
7	rs150418648	chr6:86303338-86303339	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
8	rs368530600	chr6:86303343-86303344	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
9	rs138148199	chr6:86303361-86303362	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
10	rs149574307	chr6:86303392-86303393	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
11	rs567468167	chr6:86303393-86303394	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
12	rs11558412	chr6:86303410-86303411	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
13	rs147269472	chr6:86303412-86303413	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
14	rs140849299	chr6:86303428-86303429	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
15	rs145209805	chr6:86303431-86303432	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
16	rs372883833	chr6:86303454-86303455	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region CpG island Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
17	rs530362200	chr6:86303468-86303469	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region CpG island Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
18	rs542528286	chr6:86303504-86303505	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region CpG island Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
19	rs112199582	chr6:86303507-86303508	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region CpG island Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
20	rs563834418	chr6:86303528-86303529	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
21	rs530885056	chr6:86303543-86303544	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
22	rs552310100	chr6:86303547-86303548	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
23	rs570889070	chr6:86303560-86303561	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
24	rs528548884	chr6:86303579-86303580	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
25	rs546717202	chr6:86303633-86303634	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
26	rs374656121	chr6:86303640-86303641	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
27	rs565535543	chr6:86303648-86303649	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
28	rs372656938	chr6:86303681-86303682	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region CpG island Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
29	rs536083308	chr6:86303698-86303699	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region CpG island Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
30	rs183259186	chr6:86303699-86303700	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region CpG island Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
31	rs569855951	chr6:86303736-86303737	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region CpG island Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
32	rs79514927	chr6:86303762-86303763	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region CpG island Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
33	rs558285762	chr6:86303766-86303767	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region CpG island Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
34	rs369998594	chr6:86303771-86303772	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region CpG island Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
35	rs138209337	chr6:86303843-86303844	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
36	rs149150884	chr6:86303899-86303900	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region CpG island Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
37	rs538944256	chr6:86303944-86303945	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
38	rs553142526	chr6:86303952-86303953	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
39	rs575042716	chr6:86303975-86303976	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
40	rs13199318	chr6:86304003-86304004	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
41	rs542442469	chr6:86304007-86304008	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
42	rs563977556	chr6:86304008-86304009	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
43	rs13199325	chr6:86304016-86304017	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
44	rs575863005	chr6:86304032-86304033	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
45	rs13199665	chr6:86304058-86304059	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
46	rs13199672	chr6:86304069-86304070	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
47	rs143228179	chr6:86304074-86304075	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
48	rs546510149	chr6:86304084-86304085	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
49	rs558629926	chr6:86304086-86304087	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
50	rs13199693	chr6:86304123-86304124	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:106)

Disease	PMID	Source
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Biliary cancer	19435499	CNVD
Medulloblastoma	21979893	CNVD
Malaria	21533027	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	21448237	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Autism	22495311	CNVD
Gastric cancer	17908304	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Neuroblastoma	18923191	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	17603634	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Systemic lupus erythematosus	17503323	CNVD
Melanoma	18172304	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Cancer	21637783	CNVD
Colorectal cancer	16272173	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
T-cell lymphomas	19863542	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Follicular lymphoma	19010834	CNVD
Non-small cell lung cancer	21044232	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	16608533	CNVD
Non-small cell lung cancer	21385341	CNVD
Prostate cancer	16705090	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Ependymoma	16718352	CNVD
High-proliferative meningiomas	17937814	CNVD
Intracranial tumor	16823260	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Prostate cancer	16573809	CNVD
Breast cancer	16272173	CNVD
small cell lung cancer	20016488	CNVD
Prostate cancer	18632612	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Urothelial carcinoma	18382360	CNVD
Ovarian neoplasms	16753589	CNVD
Hepatocellular carcinoma	16750200	CNVD
Wilms tumour	21544195	CNVD
Follicular lymphoma	17699855	CNVD
Breast cancer	17133270	CNVD
Leukemia	18688285	CNVD
Prostate cancer	19242612	CNVD
Glioma	21046410	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Zellweger syndrome	21572526	CNVD
Follicular lymphoma	20505157	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Malignant melanoma	18718029	CNVD
Lung adenocarcinoma	21935476	CNVD
Prostate cancer	16461572	CNVD
Mental retardation	21045960	CNVD
Obesity	21045960	CNVD
learning difficulties	21045960	CNVD
Prostate cancer	17245344	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Cancer	20164920	CNVD
Burkitt''s lymphoma	20823134	CNVD
Lung cancer	18438408	CNVD
Breast cancer	21858162	CNVD
Acute lymphoblastic leukemia	18458336	CNVD
Acute lymphoblastic leukemia	17640729	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Chondromyxoid Fibroma	20696777	CNVD
Cancer	21183584	CNVD
craniofacial dysmorphism	21918468	CNVD
Myelofibrosis	22110671	CNVD
Neurodevelopmental disorder	22521361	CNVD
abnormal development	18461090	CNVD
Myelodysplastic syndrome	18508791	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Breast cancer	21364760	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD

Chromatin state (count:1248 , 50 per page) page: 1 2 3 4 5 6 7 ... 25

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:86301600-86303600	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
2	chr6:86301800-86304600	Active TSS	NH-A	brain
3	chr6:86301800-86304600	Active TSS	NHDF-Ad	bronchial
4	chr6:86301800-86304800	Active TSS	ES-I3 Cell Line	embryonic stem cell
5	chr6:86301800-86305000	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
6	chr6:86302000-86304400	Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
7	chr6:86302000-86304600	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
8	chr6:86302000-86304800	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
9	chr6:86302000-86304800	Bivalent/Poised TSS	iPS-20b Cell Line	embryonic stem cell
10	chr6:86302000-86304800	Active TSS	HSMMtube	muscle
11	chr6:86302000-86306200	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
12	chr6:86302200-86304600	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
13	chr6:86302200-86304600	Active TSS	Brain Angular Gyrus	brain
14	chr6:86302200-86304600	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
15	chr6:86302200-86304600	Active TSS	Fetal Brain Female	brain
16	chr6:86302200-86304600	Active TSS	Fetal Kidney	kidney
17	chr6:86302200-86304600	Active TSS	Pancreatic Islets	Pancreatic Islet
18	chr6:86302200-86304600	Active TSS	Stomach Smooth Muscle	stomach
19	chr6:86302200-86304600	Active TSS	A549	lung
20	chr6:86302200-86304600	Active TSS	NHLF	lung
21	chr6:86302200-86304800	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
22	chr6:86302200-86304800	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
23	chr6:86302200-86304800	Active TSS	Brain Anterior Caudate	brain
24	chr6:86302200-86304800	Active TSS	Brain Inferior Temporal Lobe	brain
25	chr6:86302200-86304800	Active TSS	Rectal Smooth Muscle	rectum
26	chr6:86302200-86304800	Active TSS	HSMM	muscle
27	chr6:86302200-86304800	Active TSS	Osteobl	bone
28	chr6:86302200-86305000	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
29	chr6:86302200-86305000	Active TSS	Rectal Mucosa Donor 31	rectum
30	chr6:86302200-86305000	Active TSS	HMEC	breast
31	chr6:86302200-86305600	Active TSS	K562	blood
32	chr6:86302400-86304200	Active TSS	Primary T helper memory cells from peripheral blood 2	blood
33	chr6:86302400-86304200	Active TSS	Primary T helper naive cells from peripheral blood	blood
34	chr6:86302400-86304200	Active TSS	HUVEC	blood vessel
35	chr6:86302400-86304400	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
36	chr6:86302400-86304400	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
37	chr6:86302400-86304400	Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
38	chr6:86302400-86304400	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
39	chr6:86302400-86304400	Active TSS	Liver	Liver
40	chr6:86302400-86304400	Active TSS	Brain Hippocampus Middle	brain
41	chr6:86302400-86304400	Active TSS	Esophagus	oesophagus
42	chr6:86302400-86304400	Active TSS	Hela-S3	cervix
43	chr6:86302400-86304600	Active TSS	Brain Cingulate Gyrus	brain
44	chr6:86302400-86304600	Active TSS	Colon Smooth Muscle	Colon
45	chr6:86302400-86304600	Active TSS	Duodenum Smooth Muscle	Duodenum
46	chr6:86302400-86304600	Active TSS	Fetal Heart	heart
47	chr6:86302400-86304600	Active TSS	Left Ventricle	heart
48	chr6:86302400-86304600	Active TSS	Rectal Mucosa Donor 29	rectum
49	chr6:86302400-86304600	Active TSS	Right Ventricle	heart
50	chr6:86302400-86304600	Active TSS	Thymus	Thymus

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