Variant report

Variant	nsv538312
Chromosome Location	chr6:76023118-76575620
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:5500)
CpG islands
(count:2870)
Chromatin interactive
region (count:356)
LncRNA
region (count:41)
Mature miRNA
region (count: 1)
miRNA target
sites (count:0)

(count:5500 , 50 per page) page: 1 2 3 4 5 6 7 ... 110

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr6:76333004-76333194	K562	blood:	n/a	n/a
2	ARID3A	chr6:76313655-76313921	K562	blood:	n/a	n/a
3	ARID3A	chr6:76445315-76446019	HepG2	liver:	n/a	n/a
4	ARID3A	chr6:76339500-76339892	K562	blood:	n/a	n/a
5	ARID3A	chr6:76077842-76078150	HepG2	liver:	n/a	n/a
6	ARID3A	chr6:76458528-76458682	HepG2	liver:	n/a	n/a
7	ARID3A	chr6:76312666-76313021	K562	blood:	n/a	n/a
8	ARID3A	chr6:76320480-76320552	K562	blood:	n/a	n/a
9	ARID3A	chr6:76236274-76236597	HepG2	liver:	n/a	n/a
10	ARID3A	chr6:76233632-76234708	HepG2	liver:	n/a	n/a
11	ARID3A	chr6:76322881-76323353	HepG2	liver:	n/a	n/a
12	ARID3A	chr6:76457201-76457496	HepG2	liver:	n/a	n/a
13	ARID3A	chr6:76562512-76562787	HepG2	liver:	n/a	n/a
14	ARID3A	chr6:76055127-76055487	K562	blood:	n/a	n/a
15	ARID3A	chr6:76337921-76337975	HepG2	liver:	n/a	n/a
16	ARID3A	chr6:76484978-76485281	K562	blood:	n/a	n/a
17	ARID3A	chr6:76532773-76532821	HepG2	liver:	n/a	n/a
18	ARID3A	chr6:76272954-76273059	HepG2	liver:	n/a	n/a
19	ARID3A	chr6:76331504-76331869	K562	blood:	n/a	n/a
20	ARID3A	chr6:76458622-76458651	K562	blood:	n/a	n/a
21	ARID3A	chr6:76315396-76315502	K562	blood:	n/a	n/a
22	ARID3A	chr6:76342477-76343204	K562	blood:	n/a	chr6:76342662-76342678
23	ARID3A	chr6:76383585-76383961	HepG2	liver:	n/a	n/a
24	ARID3A	chr6:76311201-76311902	HepG2	liver:	n/a	n/a
25	ATF1	chr6:76342790-76343022	K562	blood:	n/a	n/a
26	ATF1	chr6:76055151-76055664	K562	blood:	n/a	n/a
27	ATF1	chr6:76562615-76562871	K562	blood:	n/a	n/a
28	ATF1	chr6:76056520-76056587	K562	blood:	n/a	n/a
29	ATF1	chr6:76517943-76518107	K562	blood:	n/a	n/a
30	ATF1	chr6:76203452-76203656	K562	blood:	n/a	n/a
31	ATF1	chr6:76244545-76244659	K562	blood:	n/a	n/a
32	ATF2	chr6:76205848-76206431	GM12878	blood:	n/a	n/a
33	ATF2	chr6:76260226-76260768	GM12878	blood:	n/a	n/a
34	ATF2	chr6:76540625-76541135	GM12878	blood:	n/a	n/a
35	ATF2	chr6:76043668-76045032	H1-hESC	embryonic stem cell:	n/a	n/a
36	ATF2	chr6:76260318-76260565	GM12878	blood:	n/a	n/a
37	ATF2	chr6:76202373-76202963	GM12878	blood:	n/a	n/a
38	ATF2	chr6:76205641-76206490	GM12878	blood:	n/a	n/a
39	ATF2	chr6:76540581-76541147	GM12878	blood:	n/a	n/a
40	ATF2	chr6:76311636-76312501	GM12878	blood:	n/a	n/a
41	ATF2	chr6:76043502-76044884	H1-hESC	embryonic stem cell:	n/a	n/a
42	ATF3	chr6:76055107-76055457	K562	blood:	n/a	n/a
43	ATF3	chr6:76077768-76078490	A549	lung:	n/a	n/a
44	ATF3	chr6:76234032-76234712	A549	lung:	n/a	n/a
45	ATF3	chr6:76233899-76234696	A549	lung:	n/a	n/a
46	ATF3	chr6:76168492-76169062	A549	lung:	n/a	n/a
47	ATF3	chr6:76127874-76128410	A549	lung:	n/a	n/a
48	ATF3	chr6:76037568-76037846	K562	blood:	n/a	n/a
49	ATF3	chr6:76168471-76169059	A549	lung:	n/a	n/a
50	ATF3	chr6:76400719-76401129	HCT-116	colon:	n/a	n/a

(count:2870 , 50 per page) page: 1 2 3 4 5 6 7 ... 58

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:76073316-76073366	MCF-7	breast:	n/a
2	chr6:76425457-76425507	AG04449	skin:	fetal
3	chr6:76309300-76309350	NH-A	brain:	n/a
4	chr6:76073316-76073366	MCF-7	breast:	n/a
5	chr6:76425457-76425507	AG04449	skin:	fetal
6	chr6:76309300-76309350	NH-A	brain:	n/a
7	chr6:76044678-76044728	AoSMC	blood vessel:	n/a
8	chr6:76112718-76112768	CMK	blood:	n/a
9	chr6:76147474-76147524	AG04449	skin:	fetal
10	chr6:76044678-76044728	PrEC	prostate:	n/a
11	chr6:76204308-76204358	HNPCEpiC	eye:	n/a
12	chr6:76203675-76203725	NH-A	brain:	n/a
13	chr6:76204308-76204358	RPTEC	kidney:	n/a
14	chr6:76059726-76059776	HRCEpiC	kidney:	n/a
15	chr6:76459511-76459561	HUVEC	blood vessel:	n/a
16	chr6:76074059-76074109	HCF	heart:	n/a
17	chr6:76151878-76151928	Hepatocyte	liver:	n/a
18	chr6:76203225-76203275	U87	brain:	n/a
19	chr6:76177392-76177442	GM12892	blood:	n/a
20	chr6:76311331-76311381	HRCEpiC	kidney:	n/a
21	chr6:76311920-76311970	GM06990	blood:	n/a
22	chr6:76059450-76059500	HNPCEpiC	eye:	n/a
23	chr6:76311363-76311413	HIPEpiC	eye:	n/a
24	chr6:76059726-76059776	HMEC	breast:	n/a
25	chr6:76147474-76147524	LNCaP	prostate:	n/a
26	chr6:76459077-76459127	HMEC	breast:	n/a
27	chr6:76044678-76044728	AG04449	skin:	fetal
28	chr6:76204308-76204358	NB4	blood:	n/a
29	chr6:76311920-76311970	HRPEpiC	eye:	n/a
30	chr6:76191813-76191863	HCM	heart:	n/a
31	chr6:76044678-76044728	AG09319	gingival:	n/a
32	chr6:76203675-76203725	HCM	heart:	n/a
33	chr6:76058068-76058118	T-47D	breast:	n/a
34	chr6:76425457-76425507	SK-N-SH_RA	brain:	n/a
35	chr6:76458633-76458683	NHDF-neo	bronchial:	n/a
36	chr6:76073316-76073366	GM12892	blood:	n/a
37	chr6:76059450-76059500	RPTEC	kidney:	n/a
38	chr6:76310551-76310601	HMEC	breast:	n/a
39	chr6:76315197-76315247	GM06990	blood:	n/a
40	chr6:76311363-76311413	NHDF-neo	bronchial:	n/a
41	chr6:76203642-76203692	HCT-116	colon:	n/a
42	chr6:76058068-76058118	GM12891	blood:	n/a
43	chr6:76312378-76312428	AG10803	skin:	n/a
44	chr6:76310551-76310601	MCF10A-Er-Src	breast:	n/a
45	chr6:76203530-76203580	HEK293	kidney:	embryo
46	chr6:76059496-76059546	T-47D	breast:	n/a
47	chr6:76311363-76311413	Jurkat	blood:	n/a
48	chr6:76319793-76319843	HEK293	kidney:	embryo
49	chr6:76177392-76177442	HMEC	breast:	n/a
50	chr6:76461321-76461371	HRCEpiC	kidney:	n/a

(count:356 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Distal block	Cell Line	Cell type
1	chr6:76467657..76469847-chr6:76559756..76561654,2	MCF-7	breast:
2	chr6:76402073..76403999-chr6:76420565..76422699,2	MCF-7	breast:
3	chr6:76359388..76361142-chr6:76366344..76368393,2	K562	blood:
4	chr6:76467679..76469997-chr6:76472807..76474955,2	K562	blood:
5	chr6:76307687..76309384-chr6:76493357..76494955,2	K562	blood:
6	chr6:76327323..76329622-chr6:76330394..76331981,2	K562	blood:
7	chr6:76193006..76194649-chr6:76195003..76197738,2	MCF-7	breast:
8	chr6:76530548..76533502-chr6:76541265..76544166,2	K562	blood:
9	chr6:76443216..76445538-chr6:76460929..76463884,2	K562	blood:
10	chr6:76077523..76078478-chr6:76214305..76215541,10	MCF-7	breast:
11	chr6:76469142..76471151-chr6:76480358..76482124,2	MCF-7	breast:
12	chr6:76452171..76456681-chr6:76457096..76463079,8	MCF-7	breast:
13	chr6:76423793..76426485-chr6:76434093..76435596,2	K562	blood:
14	chr6:76354799..76357581-chr6:76387845..76390206,2	K562	blood:
15	chr16:56659383..56660167-chr6:76311075..76311920,2	HCT-116	colon:
16	chr6:76356613..76358787-chr6:76370587..76373323,2	K562	blood:
17	chr6:76320866..76324674-chr6:76327767..76329913,3	MCF-7	breast:
18	chr6:76046416..76050325-chr6:76053759..76057191,3	K562	blood:
19	chr1:148241338..148242027-chr6:76183482..76183984,2	MCF-7	breast:
20	chr6:76443894..76445853-chr6:76451155..76454793,3	MCF-7	breast:
21	chr6:76461153..76463947-chr6:76466842..76469998,3	MCF-7	breast:
22	chr6:76046416..76050325-chr6:76053759..76057191,3	K562	blood:
23	chr6:76416198..76418365-chr6:76457940..76460718,3	MCF-7	breast:
24	chr6:76077513..76078416-chr6:76235959..76236905,3	K562	blood:
25	chr6:76472032..76473906-chr6:76480774..76483408,2	MCF-7	breast:
26	chr6:76228629..76230410-chr6:76233743..76235799,2	K562	blood:
27	chr6:76465841..76467549-chr6:76494669..76496179,2	MCF-7	breast:
28	chr6:76209916..76212546-chr6:76311057..76312919,2	MCF-7	breast:
29	chr6:76330148..76333811-chr6:76341672..76344273,3	K562	blood:
30	chr6:76337128..76338933-chr6:76358786..76360573,2	K562	blood:
31	chr6:76535425..76537050-chr6:76550391..76553381,2	MCF-7	breast:
32	chr6:76311833..76313694-chr6:76456932..76459481,3	MCF-7	breast:
33	chr6:76460418..76462531-chr6:76558690..76560910,2	MCF-7	breast:
34	chr6:76457060..76461197-chr6:76473704..76478813,6	MCF-7	breast:
35	chr6:76316110..76319023-chr6:76339771..76341687,2	K562	blood:
36	chr6:76426836..76429906-chr6:76458673..76460595,3	MCF-7	breast:
37	chr6:76061198..76063210-chr6:76102541..76105002,2	K562	blood:
38	chr6:76313605..76316318-chr6:76324603..76327531,2	MCF-7	breast:
39	chr6:76467679..76469997-chr6:76472807..76474955,2	K562	blood:
40	chr6:76467679..76470814-chr6:76472807..76475124,3	K562	blood:
41	chr6:76404187..76405990-chr6:76505413..76507332,2	MCF-7	breast:
42	chr6:76424657..76427289-chr6:76428050..76430901,3	MCF-7	breast:
43	chr6:76238349..76239999-chr6:76240837..76242447,2	MCF-7	breast:
44	chr6:76298381..76301021-chr6:76312234..76315010,2	K562	blood:
45	chr6:76234510..76236120-chr6:76239992..76242407,2	MCF-7	breast:
46	chr6:76304190..76307371-chr6:76310139..76313490,3	K562	blood:
47	chr6:76099699..76101269-chr6:76104399..76106099,2	K562	blood:
48	chr6:76415966..76418474-chr6:76457642..76460557,4	MCF-7	breast:
49	chr6:76458866..76461215-chr6:76472496..76475519,3	MCF-7	breast:
50	chr6:76135895..76137994-chr6:76139149..76140742,2	MCF-7	breast:

(count:41 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-SENP6-2	chr6:76066930-76067091	ENSG00000237174.3
2	lnc-SENP6-10	chr6:76107542-76107820	NONHSAT113613
3	lnc-SENP6-2	chr6:76070383-76070435	ENSG00000237174.3
4	lnc-SENP6-2	chr6:76068016-76068343	ENSG00000237174.3
5	lnc-FILIP1-3	chr6:76364686-76365015	NONHSAT113628
6	lnc-MYO6-6	chr6:76372937-76373221	NONHSAT113627
7	lnc-SENP6-2	chr6:76094536-76094653	ENSG00000237174.1
8	lnc-SENP6-1	chr6:76168421-76168616	ENSG00000238156
9	lnc-FILIP1-2	chr6:76320906-76321661	NONHSAT113623
10	lnc-SENP6-2	chr6:76072482-76072740	NONHSAT113608
11	lnc-MYO6-7	chr6:76344423-76344772	NONHSAT113624
12	lnc-MYO6-7	chr6:76343366-76343442	NONHSAT113624
13	lnc-SENP6-2	chr6:76071568-76071610	ENSG00000237174.3
14	lnc-TMEM30A-3	chr6:76108577-76108783	NONHSAT113614
15	lnc-SENP6-4	chr6:76433669-76434665	NONHSAT113631
16	lnc-SENP6-2	chr6:76070529-76070632	ENSG00000237174.3
17	lnc-SENP6-5	chr6:76434955-76435356	NONHSAT113632
18	lnc-SENP6-2	chr6:76070528-76070632	ENSG00000237174.1
19	lnc-SENP6-10	chr6:76108616-76108714	NONHSAT113613
20	lnc-TMEM30A-2	chr6:76028817-76029696	NONHSAT113606
21	lnc-SENP6-10	chr6:76108879-76109062	NONHSAT113613
22	lnc-SENP6-2	chr6:76072482-76072740	ENSG00000237174.3
23	lnc-MYO6-6	chr6:76368978-76369123	NONHSAT113627
24	lnc-SENP6-2	chr6:76095856-76096096	ENSG00000237174.1
25	lnc-SENP6-2	chr6:76070565-76070632	ENSG00000237174.1
26	lnc-SENP6-11	chr6:76059929-76060176	l_3206_chr6:76057402-76060176_brain
27	lnc-SENP6-6	chr6:76295838-76296177	NONHSAT113620
28	lnc-SENP6-7	chr6:76209421-76209852	NONHSAT113619
29	lnc-MYO6-1	chr6:76359931-76362040	ENSG00000249080
30	lnc-SENP6-1	chr6:76164893-76165024	ENSG00000238156
31	lnc-SENP6-2	chr6:76071568-76071727	ENSG00000237174.1
32	lnc-MYO6-1	chr6:76362140-76362390	ENSG00000249080
33	lnc-MYO6-6	chr6:76357008-76357517	NONHSAT113627
34	lnc-SENP6-11	chr6:76057403-76057457	l_3206_chr6:76057402-76060176_brain
35	lnc-SENP6-2	chr6:76075753-76075804	ENSG00000237174.1
36	lnc-SENP6-2	chr6:76066960-76067091	NONHSAT113608
37	lnc-SENP6-1	chr6:76167878-76167952	ENSG00000238156
38	lnc-FILIP1-2	chr6:76320674-76321504	NONHSAT113622
39	lnc-SENP6-2	chr6:76095374-76095400	ENSG00000237174.1
40	lnc-SENP6-1	chr6:76164660-76164717	ENSG00000238156
41	lnc-SENP6-9	chr6:76174839-76175286	NONHSAT113617

miRNA name	Chromosome Location	mirBase accession
hsa-miR-4463	chr6:76138162-76138178	MIMAT0018987

No data

Variant related genes	Relation type
ENSG00000221332	TF binding region
HMGB1P39	TF binding region
ENSG00000220730	TF binding region
RNU6-1016P	TF binding region
ENSG00000239132	TF binding region
RNU6-1338P	TF binding region
ENSG00000238156	TF binding region
RN7SKP163	TF binding region
FILIP1	TF binding region
SENP6	TF binding region
ENSG00000237174	TF binding region
RNU1-34P	TF binding region
MYO6	TF binding region
ENSG00000217488	TF binding region
RNU6-155P	TF binding region
ENSG00000217680	TF binding region
MIR4463	TF binding region
RPL26P20	TF binding region
RNA5SP209	TF binding region
ENSG00000221332	CpG island
HMGB1P39	CpG island
ENSG00000220730	CpG island
RNU6-1016P	CpG island
ENSG00000239132	CpG island
RNU6-1338P	CpG island
ENSG00000238156	CpG island
RN7SKP163	CpG island
FILIP1	CpG island
SENP6	CpG island
ENSG00000237174	CpG island
RNU1-34P	CpG island
MYO6	CpG island
ENSG00000217488	CpG island
RNU6-155P	CpG island
ENSG00000217680	CpG island
MIR4463	CpG island
RPL26P20	CpG island
RNA5SP209	CpG island
ENSG00000263533	chromatin interactions
ENSG00000166012	chromatin interactions
ENSG00000182919	chromatin interactions
ENSG00000238156	chromatin interactions
ENSG00000206737	chromatin interactions
ENSG00000220730	chromatin interactions
ENSG00000252156	chromatin interactions
ENSG00000196586	chromatin interactions
ENSG00000108854	chromatin interactions
ENSG00000155903	chromatin interactions
ENSG00000124596	chromatin interactions
ENSG00000217488	chromatin interactions
ENSG00000156535	chromatin interactions
ENSG00000100888	chromatin interactions
ENSG00000167470	chromatin interactions
ENSG00000244265	chromatin interactions
ENSG00000229862	chromatin interactions
ENSG00000112697	chromatin interactions
ENSG00000112701	chromatin interactions
ENSG00000223169	chromatin interactions
ENSG00000181788	chromatin interactions
ENSG00000156508	chromatin interactions
ENSG00000239132	chromatin interactions
ENSG00000237174	chromatin interactions
ENSG00000101447	chromatin interactions
ENSG00000118407	chromatin interactions
ENSG00000252137	chromatin interactions
ENSG00000202077	chromatin interactions
ENSG00000169715	chromatin interactions
ENSG00000267598	chromatin interactions
ENSG00000231652	chromatin interactions
ENSG00000001167	chromatin interactions
ENSG00000123505	chromatin interactions
ENSG00000207501	chromatin interactions
ENSG00000204120	chromatin interactions
ENSG00000143971	chromatin interactions
ENSG00000225793	chromatin interactions
ENSG00000112695	chromatin interactions
ENSG00000164430	chromatin interactions
ENSG00000252498	chromatin interactions
KRAS	miRNA target sites
NR4A2	miRNA target sites

Extended variants
information (count: 18105 )
Associated
traits (count: 104 )

Variant overlapped rSNPs/rCNVs (count:18105 , 50 per page) page: 1 2 3 4 5 6 7 ... 363

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs545378552	chr6:76023135-76023136	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs148968530	chr6:76023145-76023146	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs78566620	chr6:76023146-76023147	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs368729229	chr6:76023157-76023158	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs145877579	chr6:76023168-76023169	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs531280086	chr6:76023188-76023189	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs542938844	chr6:76023207-76023208	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs142709604	chr6:76023229-76023230	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs147346630	chr6:76023250-76023251	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs146541750	chr6:76023256-76023257	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs201842783	chr6:76023307-76023308	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs375456304	chr6:76023364-76023365	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs200898378	chr6:76023394-76023395	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs35449948	chr6:76023414-76023415	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
15	rs373828183	chr6:76023426-76023427	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs367963442	chr6:76023444-76023445	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs141477236	chr6:76023452-76023453	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs371768415	chr6:76023503-76023504	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs141786046	chr6:76023508-76023509	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs201906969	chr6:76023593-76023594	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs375150659	chr6:76023704-76023705	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs369652452	chr6:76023735-76023736	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs568751104	chr6:76023750-76023751	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs267601127	chr6:76023754-76023755	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs188283264	chr6:76023825-76023826	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs372010411	chr6:76023832-76023833	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs191582955	chr6:76023879-76023880	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs150576610	chr6:76023880-76023881	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs540413529	chr6:76023889-76023890	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs562398709	chr6:76023914-76023915	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs184146443	chr6:76023920-76023921	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs267601128	chr6:76023935-76023936	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs150817517	chr6:76023987-76023988	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs57297426	chr6:76024010-76024011	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs267601129	chr6:76024012-76024013	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs200175610	chr6:76024048-76024049	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs35464830	chr6:76024065-76024066	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs376668841	chr6:76024077-76024078	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs113401431	chr6:76024124-76024125	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs112573013	chr6:76024128-76024129	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs41269319	chr6:76024220-76024221	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs557428315	chr6:76024228-76024229	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs369951203	chr6:76024236-76024237	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs144226005	chr6:76024242-76024243	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs145185243	chr6:76024329-76024330	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs148809043	chr6:76024333-76024334	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs373125676	chr6:76024343-76024344	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs377467412	chr6:76024354-76024355	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs369160081	chr6:76024358-76024359	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs55780050	chr6:76024360-76024361	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:104)

Disease	PMID	Source
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Biliary cancer	19435499	CNVD
Medulloblastoma	21979893	CNVD
Malaria	21533027	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	21448237	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Autism	22495311	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Gastric cancer	17908304	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Neuroblastoma	18923191	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	17603634	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Systemic lupus erythematosus	17503323	CNVD
Melanoma	18172304	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Cancer	21637783	CNVD
Colorectal cancer	16272173	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
T-cell lymphomas	19863542	CNVD
Lung cancer	18438408	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Follicular lymphoma	19010834	CNVD
Non-small cell lung cancer	21044232	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	16608533	CNVD
Non-small cell lung cancer	21385341	CNVD
Prostate cancer	16705090	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Ependymoma	16718352	CNVD
High-proliferative meningiomas	17937814	CNVD
Intracranial tumor	16823260	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Prostate cancer	16573809	CNVD
Breast cancer	16272173	CNVD
small cell lung cancer	20016488	CNVD
Prostate cancer	18632612	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Urothelial carcinoma	18382360	CNVD
Ovarian neoplasms	16753589	CNVD
Hepatocellular carcinoma	16750200	CNVD
Wilms tumour	21544195	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Follicular lymphoma	17699855	CNVD
Breast cancer	17133270	CNVD
Leukemia	18688285	CNVD
Prostate cancer	19242612	CNVD
Developmental delay	21147756	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Glioma	21046410	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Zellweger syndrome	21572526	CNVD
Follicular lymphoma	20505157	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Malignant melanoma	18718029	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Lung adenocarcinoma	21935476	CNVD
Myelodysplastic syndrome	18508791	CNVD
Breast cancer	21364760	CNVD
Myelofibrosis	22110671	CNVD
Salivary gland tumor	18059337	CNVD
Lung cancer	16773561	CNVD
Glioblastoma multiforme	22286061	CNVD
Urothelial cell carcinoma	18451213	CNVD
Prostate cancer	16461572	CNVD
Mental retardation	21045960	CNVD
Obesity	21045960	CNVD
learning difficulties	21045960	CNVD
Prostate cancer	17245344	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Glioblastoma multiforme	21510904	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD

Chromatin state (count:8818 , 50 per page) page: 1 2 3 4 5 6 7 ... 177

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:75995400-76027600	Weak transcription	Aorta	Aorta
2	chr6:75995800-76027200	Weak transcription	Fetal Stomach	stomach
3	chr6:76010200-76027400	Weak transcription	Psoas Muscle	Psoas
4	chr6:76010400-76027600	Weak transcription	Rectal Smooth Muscle	rectum
5	chr6:76016200-76027200	Weak transcription	Colon Smooth Muscle	Colon
6	chr6:76016200-76044400	Weak transcription	Stomach Smooth Muscle	stomach
7	chr6:76018400-76027600	Weak transcription	Fetal Brain Male	brain
8	chr6:76018800-76026800	Weak transcription	H1 Cell Line	embryonic stem cell
9	chr6:76019200-76026600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
10	chr6:76019200-76026800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
11	chr6:76019200-76027400	Weak transcription	HUES64 Cell Line	embryonic stem cell
12	chr6:76019600-76027200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
13	chr6:76020600-76027400	Weak transcription	Ovary	ovary
14	chr6:76021800-76024800	Strong transcription	Fetal Muscle Trunk	muscle
15	chr6:76021800-76024800	Strong transcription	Skeletal Muscle Male	skeletal muscle
16	chr6:76021800-76024800	Strong transcription	Skeletal Muscle Female	skeletal muscle
17	chr6:76022000-76023200	Genic enhancers	Left Ventricle	heart
18	chr6:76022000-76023400	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
19	chr6:76022000-76024400	Strong transcription	Fetal Muscle Leg	muscle
20	chr6:76022000-76024800	Strong transcription	Fetal Lung	lung
21	chr6:76022200-76024800	Strong transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
22	chr6:76022200-76028000	Weak transcription	Lung	lung
23	chr6:76022600-76024800	Strong transcription	Right Ventricle	heart
24	chr6:76022600-76026800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
25	chr6:76022600-76027400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
26	chr6:76022800-76027000	Weak transcription	Fetal Heart	heart
27	chr6:76023200-76024800	Strong transcription	Left Ventricle	heart
28	chr6:76023400-76027000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
29	chr6:76024400-76027200	Weak transcription	Fetal Muscle Leg	muscle
30	chr6:76024800-76026000	Weak transcription	Fetal Lung	lung
31	chr6:76024800-76026800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
32	chr6:76024800-76027400	Weak transcription	Left Ventricle	heart
33	chr6:76024800-76027400	Weak transcription	Right Ventricle	heart
34	chr6:76024800-76027400	Weak transcription	Skeletal Muscle Female	skeletal muscle
35	chr6:76024800-76042200	Weak transcription	Skeletal Muscle Male	skeletal muscle
36	chr6:76024800-76047200	Weak transcription	Fetal Muscle Trunk	muscle
37	chr6:76026000-76027800	Enhancers	Fetal Lung	lung
38	chr6:76026600-76027000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
39	chr6:76026600-76028400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
40	chr6:76026800-76027000	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
41	chr6:76026800-76027000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
42	chr6:76026800-76027000	Flanking Active TSS	NH-A	brain
43	chr6:76026800-76027200	Enhancers	NHLF	lung
44	chr6:76026800-76027600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
45	chr6:76026800-76027800	Enhancers	H1 Cell Line	embryonic stem cell
46	chr6:76026800-76027800	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
47	chr6:76026800-76027800	Enhancers	HUES6 Cell Line	embryonic stem cell
48	chr6:76026800-76027800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
49	chr6:76026800-76028000	Enhancers	ES-I3 Cell Line	embryonic stem cell
50	chr6:76026800-76028000	Enhancers	HUVEC	blood vessel

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