Variant report

Variant	nsv538313
Chromosome Location	chr6:76045537-76545703
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:5066)
CpG islands
(count:2749)
Chromatin interactive
region (count:344)
LncRNA
region (count:40)
Mature miRNA
region (count: 1)
miRNA target
sites (count:0)

(count:5066 , 50 per page) page: 1 2 3 4 5 6 7 ... 102

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr6:76342477-76343204	K562	blood:	n/a	chr6:76342662-76342678
2	ARID3A	chr6:76383585-76383961	HepG2	liver:	n/a	n/a
3	ARID3A	chr6:76337921-76337975	HepG2	liver:	n/a	n/a
4	ARID3A	chr6:76339500-76339892	K562	blood:	n/a	n/a
5	ARID3A	chr6:76313655-76313921	K562	blood:	n/a	n/a
6	ARID3A	chr6:76333004-76333194	K562	blood:	n/a	n/a
7	ARID3A	chr6:76458622-76458651	K562	blood:	n/a	n/a
8	ARID3A	chr6:76312666-76313021	K562	blood:	n/a	n/a
9	ARID3A	chr6:76331504-76331869	K562	blood:	n/a	n/a
10	ARID3A	chr6:76484978-76485281	K562	blood:	n/a	n/a
11	ARID3A	chr6:76445315-76446019	HepG2	liver:	n/a	n/a
12	ARID3A	chr6:76311201-76311902	HepG2	liver:	n/a	n/a
13	ARID3A	chr6:76236274-76236597	HepG2	liver:	n/a	n/a
14	ARID3A	chr6:76233632-76234708	HepG2	liver:	n/a	n/a
15	ARID3A	chr6:76272954-76273059	HepG2	liver:	n/a	n/a
16	ARID3A	chr6:76322881-76323353	HepG2	liver:	n/a	n/a
17	ARID3A	chr6:76077842-76078150	HepG2	liver:	n/a	n/a
18	ARID3A	chr6:76457201-76457496	HepG2	liver:	n/a	n/a
19	ARID3A	chr6:76320480-76320552	K562	blood:	n/a	n/a
20	ARID3A	chr6:76315396-76315502	K562	blood:	n/a	n/a
21	ARID3A	chr6:76532773-76532821	HepG2	liver:	n/a	n/a
22	ARID3A	chr6:76055127-76055487	K562	blood:	n/a	n/a
23	ARID3A	chr6:76458528-76458682	HepG2	liver:	n/a	n/a
24	ATF1	chr6:76342790-76343022	K562	blood:	n/a	n/a
25	ATF1	chr6:76055151-76055664	K562	blood:	n/a	n/a
26	ATF1	chr6:76203452-76203656	K562	blood:	n/a	n/a
27	ATF1	chr6:76244545-76244659	K562	blood:	n/a	n/a
28	ATF1	chr6:76056520-76056587	K562	blood:	n/a	n/a
29	ATF1	chr6:76517943-76518107	K562	blood:	n/a	n/a
30	ATF2	chr6:76205848-76206431	GM12878	blood:	n/a	n/a
31	ATF2	chr6:76540625-76541135	GM12878	blood:	n/a	n/a
32	ATF2	chr6:76260318-76260565	GM12878	blood:	n/a	n/a
33	ATF2	chr6:76540581-76541147	GM12878	blood:	n/a	n/a
34	ATF2	chr6:76311636-76312501	GM12878	blood:	n/a	n/a
35	ATF2	chr6:76202373-76202963	GM12878	blood:	n/a	n/a
36	ATF2	chr6:76205641-76206490	GM12878	blood:	n/a	n/a
37	ATF2	chr6:76260226-76260768	GM12878	blood:	n/a	n/a
38	ATF3	chr6:76206011-76206395	K562	blood:	n/a	n/a
39	ATF3	chr6:76400719-76401129	HCT-116	colon:	n/a	n/a
40	ATF3	chr6:76077729-76078468	A549	lung:	n/a	n/a
41	ATF3	chr6:76168471-76169059	A549	lung:	n/a	n/a
42	ATF3	chr6:76127874-76128410	A549	lung:	n/a	n/a
43	ATF3	chr6:76077768-76078490	A549	lung:	n/a	n/a
44	ATF3	chr6:76168492-76169062	A549	lung:	n/a	n/a
45	ATF3	chr6:76127852-76128391	A549	lung:	n/a	n/a
46	ATF3	chr6:76234032-76234712	A549	lung:	n/a	n/a
47	ATF3	chr6:76055107-76055457	K562	blood:	n/a	n/a
48	ATF3	chr6:76233899-76234696	A549	lung:	n/a	n/a
49	BACH1	chr6:76261204-76261211	K562	blood:	n/a	n/a
50	BACH1	chr6:76458435-76458631	K562	blood:	n/a	n/a

(count:2749 , 50 per page) page: 1 2 3 4 5 6 7 ... 55

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:76086013-76086063	GM12878	blood:	n/a
2	chr6:76458005-76458055	T-47D	breast:	n/a
3	chr6:76311920-76311970	NHDF-neo	bronchial:	n/a
4	chr6:76458633-76458683	ovcar-3	ovarian:	n/a
5	chr6:76086013-76086063	GM12878	blood:	n/a
6	chr6:76458005-76458055	T-47D	breast:	n/a
7	chr6:76311920-76311970	NHDF-neo	bronchial:	n/a
8	chr6:76458633-76458683	ovcar-3	ovarian:	n/a
9	chr6:76341733-76341783	GM12892	blood:	n/a
10	chr6:76456187-76456237	HCF	heart:	n/a
11	chr6:76203532-76203582	PFSK-1	brain:	n/a
12	chr6:76203225-76203275	AoSMC	blood vessel:	n/a
13	chr6:76203666-76203716	BE2_C	brain:	n/a
14	chr6:76458633-76458683	HCF	heart:	n/a
15	chr6:76203675-76203725	GM12891	blood:	n/a
16	chr6:76191813-76191863	HPAEpiC	pulmonary alveolar:	n/a
17	chr6:76311331-76311381	PrEC	prostate:	n/a
18	chr6:76045920-76045970	NT2-D1	testis:	n/a
19	chr6:76092436-76092486	HUVEC	blood vessel:	n/a
20	chr6:76341733-76341783	GM12891	blood:	n/a
21	chr6:76059756-76059806	HNPCEpiC	eye:	n/a
22	chr6:76112718-76112768	AG09309	skin:	n/a
23	chr6:76461321-76461371	Caco-2	colon:	n/a
24	chr6:76203532-76203582	PANC-1	pancreas:	n/a
25	chr6:76059756-76059806	PANC-1	pancreas:	n/a
26	chr6:76311363-76311413	HL-60	blood:	n/a
27	chr6:76203225-76203275	BJ	skin:	n/a
28	chr6:76059726-76059776	HCT-116	colon:	n/a
29	chr6:76198240-76198290	GM19239	blood:	n/a
30	chr6:76198240-76198290	GM12892	blood:	n/a
31	chr6:76311920-76311970	HRCEpiC	kidney:	n/a
32	chr6:76312378-76312428	HPAEpiC	pulmonary alveolar:	n/a
33	chr6:76177392-76177442	SK-N-SH_RA	brain:	n/a
34	chr6:76058068-76058118	AG09309	skin:	n/a
35	chr6:76074059-76074109	Jurkat	blood:	n/a
36	chr6:76198240-76198290	HRE	kidney:	n/a
37	chr6:76312378-76312428	SK-N-MC	brain:	n/a
38	chr6:76059450-76059500	AG10803	skin:	n/a
39	chr6:76074059-76074109	CMK	blood:	n/a
40	chr6:76059756-76059806	HCPEpiC	choroid plexus:	n/a
41	chr6:76074059-76074109	AG04449	skin:	fetal
42	chr6:76311363-76311413	MCF-7	breast:	n/a
43	chr6:76059726-76059776	HL-60	blood:	n/a
44	chr6:76458633-76458683	HEK293	kidney:	embryo
45	chr6:76059756-76059806	SK-N-SH_RA	brain:	n/a
46	chr6:76330505-76330555	NH-A	brain:	n/a
47	chr6:76319793-76319843	RPTEC	kidney:	n/a
48	chr6:76045920-76045970	HAEpiC	amniotic membrane:	n/a
49	chr6:76203532-76203582	Jurkat	blood:	n/a
50	chr6:76147474-76147524	HEK293	kidney:	embryo

(count:344 , 50 per page) page: 1 2 3 4 5 6 7

No.	Distal block	Cell Line	Cell type
1	chr6:76467657..76469847-chr6:76559756..76561654,2	MCF-7	breast:
2	chr6:76077595..76078428-chr6:76214125..76215194,3	MCF-7	breast:
3	chr6:76415966..76418474-chr6:76457642..76460557,4	MCF-7	breast:
4	chr6:76522682..76525185-chr6:76527621..76531483,3	MCF-7	breast:
5	chr6:76304190..76307371-chr6:76310139..76313490,3	K562	blood:
6	chr6:76457017..76459821-chr6:76526945..76528874,2	MCF-7	breast:
7	chr6:76535425..76537050-chr6:76550391..76553381,2	MCF-7	breast:
8	chr6:76461468..76463754-chr6:76469518..76472253,2	MCF-7	breast:
9	chr6:76457614..76459414-chr6:76469003..76470756,2	K562	blood:
10	chr6:76346868..76349503-chr6:76350758..76352426,2	MCF-7	breast:
11	chr6:76443216..76445538-chr6:76460929..76463884,2	K562	blood:
12	chr6:76293040..76294596-chr6:76310899..76313196,2	MCF-7	breast:
13	chr6:76467679..76470814-chr6:76472807..76475124,3	K562	blood:
14	chr6:41039866..41042611-chr6:76456761..76459603,2	MCF-7	breast:
15	chr6:75976271..75976876-chr6:76236170..76237024,2	MCF-7	breast:
16	chr6:76371815..76374314-chr6:76380785..76382399,2	MCF-7	breast:
17	chr6:75945623..75947562-chr6:76246342..76248731,3	K562	blood:
18	chr6:76456988..76460628-chr6:76493059..76496718,4	MCF-7	breast:
19	chr6:76311276..76313926-chr6:76328791..76332406,4	MCF-7	breast:
20	chr6:76402073..76403999-chr6:76420565..76422699,2	MCF-7	breast:
21	chr6:76424414..76426953-chr6:76430333..76433018,2	MCF-7	breast:
22	chr6:76234510..76236120-chr6:76239992..76242407,2	MCF-7	breast:
23	chr6:76160176..76162378-chr6:76232969..76235854,2	MCF-7	breast:
24	chr6:76402029..76404149-chr6:76408590..76410105,2	MCF-7	breast:
25	chr6:76359388..76361142-chr6:76366344..76368393,2	K562	blood:
26	chr3:150479690..150481282-chr6:76352345..76354574,2	MCF-7	breast:
27	chr6:76104675..76107319-chr6:76109802..76112685,2	K562	blood:
28	chr6:76408144..76410485-chr6:76410972..76412755,2	MCF-7	breast:
29	chr6:76271916..76274380-chr6:76310344..76312548,2	MCF-7	breast:
30	chr6:76458193..76461486-chr6:76482230..76486067,4	MCF-7	breast:
31	chr6:76457060..76461197-chr6:76473704..76478813,6	MCF-7	breast:
32	chr6:76431586..76433985-chr6:76438066..76440225,2	MCF-7	breast:
33	chr20:37554612..37555527-chr6:76311330..76312268,2	Hela-S3	cervix:
34	chr6:76459866..76461619-chr6:76483545..76486040,2	K562	blood:
35	chr6:76311308..76313074-chr6:76339776..76343248,3	MCF-7	breast:
36	chr1:148240025..148241548-chr6:76181957..76184955,2	K562	blood:
37	chr6:76286862..76288767-chr6:76289048..76291040,2	MCF-7	breast:
38	chr6:76337128..76338933-chr6:76358786..76360573,2	K562	blood:
39	chr6:76061198..76063210-chr6:76102541..76105002,2	K562	blood:
40	chr6:76218487..76221203-chr6:76231710..76234435,2	MCF-7	breast:
41	chr6:76404187..76405990-chr6:76505413..76507332,2	MCF-7	breast:
42	chr6:76336673..76339246-chr6:76344928..76346520,2	MCF-7	breast:
43	chr6:76086882..76088645-chr6:76090320..76093315,3	K562	blood:
44	chr6:76348163..76350859-chr6:76356641..76358719,2	K562	blood:
45	chr6:75976182..75977252-chr6:76235953..76236891,4	K562	blood:
46	chr6:76348810..76350607-chr6:76352555..76355121,2	K562	blood:
47	chr6:76325725..76327529-chr6:76327837..76330229,2	K562	blood:
48	chr6:76397986..76399777-chr6:76458759..76460559,2	MCF-7	breast:
49	chr6:76530548..76533502-chr6:76541265..76544166,2	K562	blood:
50	chr6:76314618..76316766-chr6:76326972..76330457,3	K562	blood:

(count:40 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-SENP6-2	chr6:76070383-76070435	ENSG00000237174.3
2	lnc-SENP6-10	chr6:76108879-76109062	NONHSAT113613
3	lnc-SENP6-11	chr6:76059929-76060176	l_3206_chr6:76057402-76060176_brain
4	lnc-MYO6-7	chr6:76344423-76344772	NONHSAT113624
5	lnc-SENP6-10	chr6:76108616-76108714	NONHSAT113613
6	lnc-SENP6-1	chr6:76168421-76168616	ENSG00000238156
7	lnc-SENP6-2	chr6:76068016-76068343	ENSG00000237174.3
8	lnc-SENP6-4	chr6:76433669-76434665	NONHSAT113631
9	lnc-SENP6-9	chr6:76174839-76175286	NONHSAT113617
10	lnc-SENP6-2	chr6:76072482-76072740	ENSG00000237174.3
11	lnc-SENP6-2	chr6:76072482-76072740	NONHSAT113608
12	lnc-SENP6-2	chr6:76070529-76070632	ENSG00000237174.3
13	lnc-SENP6-11	chr6:76057403-76057457	l_3206_chr6:76057402-76060176_brain
14	lnc-SENP6-1	chr6:76164893-76165024	ENSG00000238156
15	lnc-SENP6-10	chr6:76107542-76107820	NONHSAT113613
16	lnc-SENP6-1	chr6:76164660-76164717	ENSG00000238156
17	lnc-MYO6-6	chr6:76357008-76357517	NONHSAT113627
18	lnc-MYO6-6	chr6:76368978-76369123	NONHSAT113627
19	lnc-SENP6-2	chr6:76070528-76070632	ENSG00000237174.1
20	lnc-SENP6-2	chr6:76071568-76071610	ENSG00000237174.3
21	lnc-SENP6-2	chr6:76095374-76095400	ENSG00000237174.1
22	lnc-SENP6-2	chr6:76095856-76096096	ENSG00000237174.1
23	lnc-MYO6-6	chr6:76372937-76373221	NONHSAT113627
24	lnc-FILIP1-3	chr6:76364686-76365015	NONHSAT113628
25	lnc-SENP6-1	chr6:76167878-76167952	ENSG00000238156
26	lnc-SENP6-2	chr6:76066930-76067091	ENSG00000237174.3
27	lnc-SENP6-2	chr6:76094536-76094653	ENSG00000237174.1
28	lnc-SENP6-2	chr6:76070565-76070632	ENSG00000237174.1
29	lnc-TMEM30A-3	chr6:76108577-76108783	NONHSAT113614
30	lnc-SENP6-5	chr6:76434955-76435356	NONHSAT113632
31	lnc-SENP6-6	chr6:76295838-76296177	NONHSAT113620
32	lnc-SENP6-2	chr6:76066960-76067091	NONHSAT113608
33	lnc-FILIP1-2	chr6:76320674-76321504	NONHSAT113622
34	lnc-FILIP1-2	chr6:76320906-76321661	NONHSAT113623
35	lnc-SENP6-7	chr6:76209421-76209852	NONHSAT113619
36	lnc-MYO6-1	chr6:76362140-76362390	ENSG00000249080
37	lnc-MYO6-1	chr6:76359931-76362040	ENSG00000249080
38	lnc-MYO6-7	chr6:76343366-76343442	NONHSAT113624
39	lnc-SENP6-2	chr6:76075753-76075804	ENSG00000237174.1
40	lnc-SENP6-2	chr6:76071568-76071727	ENSG00000237174.1

miRNA name	Chromosome Location	mirBase accession
hsa-miR-4463	chr6:76138162-76138178	MIMAT0018987

No data

Variant related genes	Relation type
ENSG00000221332	TF binding region
ENSG00000238156	TF binding region
RN7SKP163	TF binding region
FILIP1	TF binding region
SENP6	TF binding region
ENSG00000237174	TF binding region
RNU1-34P	TF binding region
MYO6	TF binding region
ENSG00000220730	TF binding region
RNU6-1016P	TF binding region
ENSG00000217488	TF binding region
RNU6-155P	TF binding region
ENSG00000217680	TF binding region
MIR4463	TF binding region
RNU6-1338P	TF binding region
RPL26P20	TF binding region
ENSG00000221332	CpG island
ENSG00000238156	CpG island
RN7SKP163	CpG island
FILIP1	CpG island
SENP6	CpG island
ENSG00000237174	CpG island
RNU1-34P	CpG island
MYO6	CpG island
ENSG00000220730	CpG island
RNU6-1016P	CpG island
ENSG00000217488	CpG island
RNU6-155P	CpG island
ENSG00000217680	CpG island
MIR4463	CpG island
RNU6-1338P	CpG island
RPL26P20	CpG island
ENSG00000112701	chromatin interactions
ENSG00000217488	chromatin interactions
ENSG00000237174	chromatin interactions
ENSG00000156535	chromatin interactions
ENSG00000100888	chromatin interactions
ENSG00000220730	chromatin interactions
ENSG00000001167	chromatin interactions
ENSG00000263533	chromatin interactions
ENSG00000204120	chromatin interactions
ENSG00000231652	chromatin interactions
ENSG00000167470	chromatin interactions
ENSG00000267598	chromatin interactions
ENSG00000123505	chromatin interactions
ENSG00000225793	chromatin interactions
ENSG00000238156	chromatin interactions
ENSG00000207501	chromatin interactions
ENSG00000143971	chromatin interactions
ENSG00000169715	chromatin interactions
ENSG00000239132	chromatin interactions
ENSG00000202077	chromatin interactions
ENSG00000112695	chromatin interactions
ENSG00000244265	chromatin interactions
ENSG00000223169	chromatin interactions
ENSG00000166012	chromatin interactions
ENSG00000229862	chromatin interactions
ENSG00000112697	chromatin interactions
ENSG00000156508	chromatin interactions
ENSG00000252156	chromatin interactions
ENSG00000182919	chromatin interactions
ENSG00000101447	chromatin interactions
ENSG00000196586	chromatin interactions
ENSG00000155903	chromatin interactions
ENSG00000164430	chromatin interactions
ENSG00000181788	chromatin interactions
ENSG00000124596	chromatin interactions
ENSG00000252137	chromatin interactions
ENSG00000118407	chromatin interactions
ENSG00000108854	chromatin interactions
ENSG00000206737	chromatin interactions
ENSG00000252498	chromatin interactions
KRAS	miRNA target sites
NR4A2	miRNA target sites

Extended variants
information (count: 16175 )
Associated
traits (count: 104 )

Variant overlapped rSNPs/rCNVs (count:16175 , 50 per page) page: 1 2 3 4 5 6 7 ... 324

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs142456529	chr6:76045602-76045603	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs530518437	chr6:76045617-76045618	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs79272960	chr6:76045624-76045625	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs183837239	chr6:76045643-76045644	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs528397636	chr6:76045683-76045684	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs187031823	chr6:76045731-76045732	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs74296344	chr6:76045804-76045805	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs571363778	chr6:76045829-76045830	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs532300608	chr6:76045839-76045840	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs550793260	chr6:76045850-76045851	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs559525481	chr6:76045886-76045887	Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
12	rs147944564	chr6:76045920-76045921	Enhancers Weak transcription	CpG island	1 gene(s)	Overlapped CNVs	n/a
13	rs193054056	chr6:76045921-76045922	Enhancers Weak transcription	CpG island	1 gene(s)	Overlapped CNVs	n/a
14	rs577963686	chr6:76045942-76045943	Enhancers Weak transcription	CpG island	1 gene(s)	Overlapped CNVs	n/a
15	rs549424475	chr6:76045962-76045963	Enhancers Weak transcription	CpG island	1 gene(s)	Overlapped CNVs	n/a
16	rs567620292	chr6:76046023-76046024	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs535021459	chr6:76046028-76046029	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs553588573	chr6:76046030-76046031	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs545568454	chr6:76046053-76046054	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs563777194	chr6:76046065-76046066	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs118015108	chr6:76046140-76046141	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs185234512	chr6:76046141-76046142	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs557123700	chr6:76046191-76046192	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs575029729	chr6:76046203-76046204	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs542287491	chr6:76046220-76046221	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs529331422	chr6:76046224-76046225	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs560738248	chr6:76046233-76046234	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs568309390	chr6:76046262-76046263	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs572758066	chr6:76046271-76046272	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs190347188	chr6:76046294-76046295	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs201785332	chr6:76046347-76046348	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs565232377	chr6:76046392-76046393	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs532440698	chr6:76046401-76046402	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs550831350	chr6:76046441-76046442	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs4541712	chr6:76046468-76046469	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
36	rs531046302	chr6:76046472-76046473	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs141869790	chr6:76046496-76046497	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs147079789	chr6:76046497-76046498	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs577859750	chr6:76046534-76046535	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs543454675	chr6:76046572-76046573	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs546673325	chr6:76046667-76046668	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs571647178	chr6:76046749-76046750	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs538929412	chr6:76046759-76046760	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs138494133	chr6:76046800-76046801	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs549077606	chr6:76046808-76046809	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs182092719	chr6:76046817-76046818	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs140176536	chr6:76046822-76046823	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs535952662	chr6:76046831-76046832	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs554603652	chr6:76046884-76046885	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs185844726	chr6:76046889-76046890	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:104)

Disease	PMID	Source
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Biliary cancer	19435499	CNVD
Medulloblastoma	21979893	CNVD
Malaria	21533027	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	21448237	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Autism	22495311	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Gastric cancer	17908304	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Neuroblastoma	18923191	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	17603634	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Systemic lupus erythematosus	17503323	CNVD
Melanoma	18172304	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Cancer	21637783	CNVD
Colorectal cancer	16272173	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
T-cell lymphomas	19863542	CNVD
Lung cancer	18438408	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Follicular lymphoma	19010834	CNVD
Non-small cell lung cancer	21044232	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	16608533	CNVD
Non-small cell lung cancer	21385341	CNVD
Prostate cancer	16705090	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Ependymoma	16718352	CNVD
High-proliferative meningiomas	17937814	CNVD
Intracranial tumor	16823260	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Prostate cancer	16573809	CNVD
Breast cancer	16272173	CNVD
small cell lung cancer	20016488	CNVD
Prostate cancer	18632612	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Urothelial carcinoma	18382360	CNVD
Ovarian neoplasms	16753589	CNVD
Hepatocellular carcinoma	16750200	CNVD
Wilms tumour	21544195	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Follicular lymphoma	17699855	CNVD
Breast cancer	17133270	CNVD
Leukemia	18688285	CNVD
Prostate cancer	19242612	CNVD
Developmental delay	21147756	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Glioma	21046410	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Zellweger syndrome	21572526	CNVD
Follicular lymphoma	20505157	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Malignant melanoma	18718029	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Lung adenocarcinoma	21935476	CNVD
Myelodysplastic syndrome	18508791	CNVD
Breast cancer	21364760	CNVD
Myelofibrosis	22110671	CNVD
Salivary gland tumor	18059337	CNVD
Lung cancer	16773561	CNVD
Glioblastoma multiforme	22286061	CNVD
Urothelial cell carcinoma	18451213	CNVD
Prostate cancer	16461572	CNVD
Mental retardation	21045960	CNVD
Obesity	21045960	CNVD
learning difficulties	21045960	CNVD
Prostate cancer	17245344	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Glioblastoma multiforme	21510904	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD

Chromatin state (count:8092 , 50 per page) page: 1 2 3 4 5 6 7 ... 162

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:76024800-76047200	Weak transcription	Fetal Muscle Trunk	muscle
2	chr6:76043200-76046000	Enhancers	Fetal Heart	heart
3	chr6:76043600-76046000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
4	chr6:76043600-76046400	Enhancers	Colon Smooth Muscle	Colon
5	chr6:76044200-76046200	Enhancers	Duodenum Smooth Muscle	Duodenum
6	chr6:76044200-76046200	Enhancers	Rectal Smooth Muscle	rectum
7	chr6:76044400-76045600	Enhancers	HUVEC	blood vessel
8	chr6:76044400-76045800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
9	chr6:76044400-76049200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
10	chr6:76044600-76046600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
11	chr6:76044600-76047200	Weak transcription	Psoas Muscle	Psoas
12	chr6:76044600-76047600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
13	chr6:76044600-76052200	Weak transcription	Fetal Muscle Leg	muscle
14	chr6:76044600-76072800	Weak transcription	A549	lung
15	chr6:76044800-76045600	Flanking Active TSS	iPS-20b Cell Line	embryonic stem cell
16	chr6:76044800-76046000	Enhancers	Fetal Lung	lung
17	chr6:76044800-76047000	Weak transcription	Left Ventricle	heart
18	chr6:76044800-76047200	Weak transcription	Skeletal Muscle Female	skeletal muscle
19	chr6:76044800-76052000	Weak transcription	Brain Anterior Caudate	brain
20	chr6:76044800-76054000	Weak transcription	Right Ventricle	heart
21	chr6:76044800-76058400	Weak transcription	H1 Cell Line	embryonic stem cell
22	chr6:76044800-76059000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
23	chr6:76044800-76059000	Weak transcription	Aorta	Aorta
24	chr6:76044800-76059000	Weak transcription	Fetal Brain Male	brain
25	chr6:76044800-76059000	Weak transcription	Ovary	ovary
26	chr6:76045000-76046000	Enhancers	HUES6 Cell Line	embryonic stem cell
27	chr6:76045000-76046400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
28	chr6:76045000-76046400	Enhancers	iPS-15b Cell Line	embryonic stem cell
29	chr6:76045000-76046400	Enhancers	iPS-18 Cell Line	embryonic stem cell
30	chr6:76045000-76046800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
31	chr6:76045000-76047600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
32	chr6:76045000-76053800	Weak transcription	Stomach Smooth Muscle	stomach
33	chr6:76045000-76056800	Weak transcription	Fetal Stomach	stomach
34	chr6:76045000-76058600	Weak transcription	Skeletal Muscle Male	skeletal muscle
35	chr6:76045000-76058800	Weak transcription	Brain Hippocampus Middle	brain
36	chr6:76045200-76046000	Enhancers	ES-I3 Cell Line	embryonic stem cell
37	chr6:76045200-76046000	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
38	chr6:76045200-76047200	Enhancers	HUES64 Cell Line	embryonic stem cell
39	chr6:76045400-76046000	Enhancers	ES-WA7 Cell Line	embryonic stem cell
40	chr6:76045400-76047400	Enhancers	HUES48 Cell Line	embryonic stem cell
41	chr6:76045600-76047200	Weak transcription	HUVEC	blood vessel
42	chr6:76045600-76048400	Enhancers	iPS-20b Cell Line	embryonic stem cell
43	chr6:76045800-76046000	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
44	chr6:76046000-76046400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
45	chr6:76046000-76047000	Weak transcription	Fetal Lung	lung
46	chr6:76046000-76047600	Weak transcription	HUES6 Cell Line	embryonic stem cell
47	chr6:76046000-76048200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
48	chr6:76046000-76057200	Weak transcription	Fetal Heart	heart
49	chr6:76046000-76058400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
50	chr6:76046200-76057000	Weak transcription	Duodenum Smooth Muscle	Duodenum

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