No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs543611454 |
chr6:88038572-88038573 |
Active TSS Enhancers Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
2 |
rs184116732 |
chr6:88038577-88038578 |
Active TSS Enhancers Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs577101201 |
chr6:88038578-88038579 |
Active TSS Enhancers Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs28890862 |
chr6:88038584-88038585 |
Active TSS Enhancers Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs190817343 |
chr6:88038590-88038591 |
Active TSS Enhancers Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs182314049 |
chr6:88038626-88038627 |
Active TSS Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs542721397 |
chr6:88038631-88038632 |
Active TSS Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs143115787 |
chr6:88038639-88038640 |
Active TSS Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs531672725 |
chr6:88038664-88038665 |
Active TSS Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs151199208 |
chr6:88038694-88038695 |
Active TSS Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs141397477 |
chr6:88038701-88038702 |
Active TSS Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs186623083 |
chr6:88038711-88038712 |
Active TSS Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs147011459 |
chr6:88038735-88038736 |
Active TSS Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs138243989 |
chr6:88038741-88038742 |
Active TSS Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs536222124 |
chr6:88038798-88038799 |
Active TSS Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs73488017 |
chr6:88038822-88038823 |
Active TSS Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats
|
Chromatin interactive region
|
3 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
17 |
rs569792589 |
chr6:88038825-88038826 |
Active TSS Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs552800858 |
chr6:88038835-88038836 |
Active TSS Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs116724056 |
chr6:88038841-88038842 |
Active TSS Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs538478409 |
chr6:88038843-88038844 |
Active TSS Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs114519347 |
chr6:88038844-88038845 |
Active TSS Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs71572749 |
chr6:88038856-88038857 |
Active TSS Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats
|
Chromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs571724564 |
chr6:88038894-88038895 |
Active TSS Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats
|
Chromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
24 |
rs193008033 |
chr6:88038895-88038896 |
Active TSS Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats
|
Chromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs552807784 |
chr6:88038902-88038903 |
Active TSS Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats
|
Chromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs572124013 |
chr6:88038923-88038924 |
Active TSS Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats
|
Chromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs58321177 |
chr6:88038961-88038962 |
Active TSS Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
28 |
rs560931451 |
chr6:88039023-88039024 |
Active TSS Weak transcription Flanking Active TSS Enhancers
|
TF binding regionCpG islandChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs182790561 |
chr6:88039032-88039033 |
Active TSS Weak transcription Flanking Active TSS Enhancers
|
TF binding regionCpG islandChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs60628059 |
chr6:88039049-88039050 |
Active TSS Weak transcription Flanking Active TSS Enhancers
|
TF binding regionCpG islandChromatin interactive region
|
4 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
31 |
rs188692527 |
chr6:88039055-88039056 |
Active TSS Weak transcription Flanking Active TSS Enhancers
|
TF binding regionCpG islandChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs532558663 |
chr6:88039062-88039063 |
Active TSS Weak transcription Flanking Active TSS Enhancers
|
TF binding regionCpG islandChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
33 |
rs548087845 |
chr6:88039063-88039064 |
Active TSS Weak transcription Flanking Active TSS Enhancers
|
TF binding regionCpG islandChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs566350704 |
chr6:88039117-88039118 |
Active TSS Weak transcription Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
35 |
rs192832169 |
chr6:88039139-88039140 |
Active TSS Weak transcription Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs548239491 |
chr6:88039141-88039142 |
Active TSS Weak transcription Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs184998077 |
chr6:88039178-88039179 |
Active TSS Weak transcription Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs116406933 |
chr6:88039203-88039204 |
Active TSS Weak transcription Enhancers
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
39 |
rs558322827 |
chr6:88039205-88039206 |
Active TSS Weak transcription Enhancers
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs72391962 |
chr6:88039217-88039218 |
Active TSS Weak transcription Enhancers
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs60776882 |
chr6:88039230-88039231 |
Active TSS Weak transcription Enhancers
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs548753846 |
chr6:88039248-88039249 |
Active TSS Weak transcription Enhancers
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs189572632 |
chr6:88039272-88039273 |
Active TSS Weak transcription Enhancers
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs57596999 |
chr6:88039304-88039305 |
Active TSS Weak transcription Enhancers
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
45 |
rs552871703 |
chr6:88039310-88039311 |
Active TSS Weak transcription Enhancers
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs574426621 |
chr6:88039377-88039378 |
Active TSS Weak transcription Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs368831757 |
chr6:88039409-88039410 |
Active TSS Weak transcription Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs145953174 |
chr6:88039416-88039417 |
Active TSS Weak transcription Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
49 |
rs554588984 |
chr6:88039424-88039425 |
Active TSS Weak transcription Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs568637080 |
chr6:88039426-88039427 |
Active TSS Weak transcription Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|