Variant report

Variant	nsv538681
Chromosome Location	chr7:3650882-3753563
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	BACH1	chr7:3713169-3713470	H1-hESC	embryonic stem cell:	n/a	n/a
2	BACH1	chr7:3657589-3657734	H1-hESC	embryonic stem cell:	n/a	n/a
3	BACH1	chr7:3731377-3731827	H1-hESC	embryonic stem cell:	n/a	n/a
4	BHLHE40	chr7:3721967-3722323	HepG2	liver:	n/a	n/a
5	CCNT2	chr7:3662206-3662335	K562	blood:	n/a	n/a
6	CEBPB	chr7:3735387-3735863	HepG2	liver:	n/a	chr7:3735704-3735717 chr7:3735591-3735599 chr7:3735705-3735716
7	CEBPB	chr7:3689783-3689977	H1-hESC	embryonic stem cell:	n/a	chr7:3689906-3689917
8	CEBPB	chr7:3689730-3690095	IMR90	lung:	n/a	chr7:3689906-3689917
9	CEBPB	chr7:3732825-3733006	HepG2	liver:	n/a	n/a
10	CEBPB	chr7:3722310-3722477	HepG2	liver:	n/a	chr7:3722426-3722437
11	CEBPB	chr7:3689739-3690076	HepG2	liver:	n/a	chr7:3689906-3689917
12	CEBPB	chr7:3735439-3735877	K562	blood:	n/a	chr7:3735704-3735717 chr7:3735591-3735599 chr7:3735705-3735716
13	CEBPB	chr7:3689754-3690077	K562	blood:	n/a	chr7:3689906-3689917
14	CEBPB	chr7:3689713-3690022	MCF-7	breast:	n/a	chr7:3689906-3689917
15	CEBPB	chr7:3722392-3722443	IMR90	lung:	n/a	chr7:3722426-3722437
16	CEBPB	chr7:3750088-3750627	MCF-7	breast:	n/a	chr7:3750408-3750425
17	CEBPB	chr7:3689750-3690087	Hela-S3	cervix:	n/a	chr7:3689906-3689917
18	CEBPB	chr7:3669099-3669481	MCF-7	breast:	n/a	chr7:3669297-3669308
19	CEBPB	chr7:3750353-3750572	IMR90	lung:	n/a	chr7:3750408-3750425
20	CEBPB	chr7:3666847-3666953	HepG2	liver:	n/a	n/a
21	CEBPB	chr7:3722260-3722580	HepG2	liver:	n/a	chr7:3722426-3722437
22	CEBPB	chr7:3750311-3750526	K562	blood:	n/a	chr7:3750408-3750425
23	CEBPB	chr7:3750202-3750546	Hela-S3	cervix:	n/a	chr7:3750408-3750425
24	CEBPB	chr7:3669159-3669429	HepG2	liver:	n/a	chr7:3669297-3669308
25	CEBPB	chr7:3750144-3750719	MCF-7	breast:	n/a	chr7:3750408-3750425
26	CEBPB	chr7:3689734-3690090	A549	lung:	n/a	chr7:3689906-3689917
27	CEBPB	chr7:3735419-3735759	H1-hESC	embryonic stem cell:	n/a	chr7:3735704-3735717 chr7:3735591-3735599 chr7:3735705-3735716
28	CEBPB	chr7:3735440-3735874	A549	lung:	n/a	chr7:3735704-3735717 chr7:3735591-3735599 chr7:3735705-3735716
29	CHD2	chr7:3723200-3723390	HepG2	liver:	n/a	n/a
30	CHD2	chr7:3713229-3713285	HepG2	liver:	n/a	n/a
31	CTCF	chr7:3713232-3713443	Medullo	brain:	n/a	chr7:3713345-3713363 chr7:3713347-3713360 chr7:3713346-3713362 chr7:3713348-3713358
32	CTCF	chr7:3688964-3689119	MCF-7	breast:	n/a	n/a
33	CTCF	chr7:3735360-3735510	GM12873	blood:	n/a	chr7:3735433-3735451
34	CTCF	chr7:3689000-3689150	AoAF	blood vessel:	n/a	n/a
35	CTCF	chr7:3688881-3689194	IMR90	lung:	n/a	n/a
36	CTCF	chr7:3688817-3689193	MCF-7	breast:	n/a	n/a
37	CTCF	chr7:3733918-3733927	H1-hESC	embryonic stem cell:	n/a	n/a
38	CTCF	chr7:3735332-3735549	Spleen_OC	spleen:	n/a	chr7:3735433-3735451
39	CTCF	chr7:3656000-3656150	SK-N-SH_RA	brain:	n/a	chr7:3656120-3656129
40	CTCF	chr7:3735295-3735586	GM12878	blood:	n/a	chr7:3735433-3735451
41	CTCF	chr7:3712592-3714078	A549	lung:	n/a	chr7:3713345-3713363 chr7:3713347-3713360 chr7:3713346-3713362 chr7:3713348-3713358
42	CTCF	chr7:3713300-3713450	NHDF-neo	bronchial:	n/a	chr7:3713345-3713363 chr7:3713347-3713360 chr7:3713346-3713362 chr7:3713348-3713358
43	CTCF	chr7:3689000-3689150	HEEpiC	esophagus:	n/a	n/a
44	CTCF	chr7:3713220-3713370	K562	blood:	n/a	chr7:3713345-3713363 chr7:3713347-3713360 chr7:3713346-3713362 chr7:3713348-3713358
45	CTCF	chr7:3688960-3689110	HRE	kidney:	n/a	n/a
46	CTCF	chr7:3751700-3751850	HepG2	liver:	n/a	n/a
47	CTCF	chr7:3713220-3713370	HA-sp	spinal cord:	n/a	chr7:3713345-3713363 chr7:3713347-3713360 chr7:3713346-3713362 chr7:3713348-3713358
48	CTCF	chr7:3735276-3735548	A549	lung:	n/a	chr7:3735433-3735451
49	CTCF	chr7:3688960-3689110	HUVEC	blood vessel:	n/a	n/a
50	CTCF	chr7:3713320-3713470	HA-sp	spinal cord:	n/a	chr7:3713345-3713363 chr7:3713347-3713360 chr7:3713346-3713362 chr7:3713348-3713358

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr7:3723660-3723710	Hela-S3	cervix:	n/a
2	chr7:3723660-3723710	Hela-S3	cervix:	n/a
3	chr7:3713348-3713398	AoSMC	blood vessel:	n/a
4	chr7:3723660-3723710	HPAEpiC	pulmonary alveolar:	n/a
5	chr7:3727166-3727216	AG09309	skin:	n/a
6	chr7:3691268-3691318	HAEpiC	amniotic membrane:	n/a
7	chr7:3710628-3710678	AG04449	skin:	fetal
8	chr7:3727166-3727216	ovcar-3	ovarian:	n/a
9	chr7:3713348-3713398	ProgFib	skin:	n/a
10	chr7:3727166-3727216	GM12891	blood:	n/a
11	chr7:3713348-3713398	SKMC	muscle:	n/a
12	chr7:3723660-3723710	AoSMC	blood vessel:	n/a
13	chr7:3691268-3691318	K562	blood:	n/a
14	chr7:3727189-3727239	GM06990	blood:	n/a
15	chr7:3727189-3727239	K562	blood:	n/a
16	chr7:3723660-3723710	BJ	skin:	n/a
17	chr7:3723660-3723710	AG09309	skin:	n/a
18	chr7:3713348-3713398	BE2_C	brain:	n/a
19	chr7:3723660-3723710	HEEpiC	esophagus:	n/a
20	chr7:3691268-3691318	U87	brain:	n/a
21	chr7:3723660-3723710	HUVEC	blood vessel:	n/a
22	chr7:3710628-3710678	Hepatocyte	liver:	n/a
23	chr7:3723660-3723710	AG09319	gingival:	n/a
24	chr7:3713348-3713398	Hepatocyte	liver:	n/a
25	chr7:3710628-3710678	HCT-116	colon:	n/a
26	chr7:3727189-3727239	BJ	skin:	n/a
27	chr7:3691268-3691318	HEK293	kidney:	embryo
28	chr7:3691268-3691318	Caco-2	colon:	n/a
29	chr7:3727189-3727239	AG04449	skin:	fetal
30	chr7:3723660-3723710	NB4	blood:	n/a
31	chr7:3710628-3710678	CMK	blood:	n/a
32	chr7:3727166-3727216	MCF-7	breast:	n/a
33	chr7:3713348-3713398	GM19239	blood:	n/a
34	chr7:3710628-3710678	SK-N-MC	brain:	n/a
35	chr7:3710628-3710678	SAEC	small airway:	n/a
36	chr7:3727189-3727239	GM12878	blood:	n/a
37	chr7:3727189-3727239	HRPEpiC	eye:	n/a
38	chr7:3710628-3710678	NHDF-neo	bronchial:	n/a
39	chr7:3713348-3713398	AG09309	skin:	n/a
40	chr7:3713348-3713398	PrEC	prostate:	n/a
41	chr7:3727166-3727216	AG04449	skin:	fetal
42	chr7:3691268-3691318	HEEpiC	esophagus:	n/a
43	chr7:3710628-3710678	NB4	blood:	n/a
44	chr7:3727189-3727239	AG09309	skin:	n/a
45	chr7:3727166-3727216	HL-60	blood:	n/a
46	chr7:3727189-3727239	HUVEC	blood vessel:	n/a
47	chr7:3727166-3727216	LNCaP	prostate:	n/a
48	chr7:3727166-3727216	K562	blood:	n/a
49	chr7:3710628-3710678	SKMC	muscle:	n/a
50	chr7:3713348-3713398	NH-A	brain:	n/a

No.	Distal block	Cell Line	Cell type
1	chr7:3657416..3659816-chr7:3660917..3663637,2	K562	blood:
2	chr7:3750817..3752407-chr7:3752998..3754553,2	K562	blood:
3	chr7:3657416..3659816-chr7:3660917..3663637,2	K562	blood:
4	chr7:3726774..3729602-chr7:3732139..3735055,2	K562	blood:
5	chr4:37757943..37758649-chr7:3694176..3695010,2	MCF-7	breast:
6	chr7:3675585..3677733-chr7:3691127..3693566,2	K562	blood:
7	chr7:3727791..3730295-chr7:3732130..3734302,2	MCF-7	breast:
8	chr7:3727225..3728784-chr7:3739798..3742268,2	K562	blood:
9	chr7:3521755..3523053-chr7:3688631..3689551,7	MCF-7	breast:
10	chr7:3675585..3677733-chr7:3691127..3693566,2	K562	blood:
11	chr7:3727225..3728784-chr7:3739798..3742268,2	K562	blood:
12	chr7:3666241..3668989-chr7:3678664..3681539,2	MCF-7	breast:
13	chr7:3726774..3729602-chr7:3732139..3735055,2	K562	blood:
14	chr7:3670051..3672841-chr7:3673465..3675022,2	MCF-7	breast:
15	chr7:3650446..3652502-chr7:3655244..3656781,2	MCF-7	breast:
16	chr7:3734945..3735889-chr7:3936899..3937757,3	MCF-7	breast:
17	chr7:3670051..3672841-chr7:3673465..3675022,2	MCF-7	breast:
18	chr7:3727791..3730295-chr7:3732130..3734302,2	MCF-7	breast:
19	chr7:3522949..3523470-chr7:3687761..3688597,2	MCF-7	breast:
20	chr7:3750817..3752407-chr7:3752998..3754553,2	K562	blood:
21	chr7:3650446..3652502-chr7:3655244..3656781,2	MCF-7	breast:
22	chr7:3681955..3684927-chr7:3685128..3688064,3	K562	blood:
23	chr7:3666241..3668989-chr7:3678664..3681539,2	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-AC091801.1.1-7	chr7:3683098-3683416	ENSG00000236510.1
2	lnc-AC091801.1.1-7	chr7:3682447-3682983	ENSG00000236510.1

Variant related genes	Relation type
ENSG00000236510	TF binding region
ENSG00000236510	CpG island
ENSG00000236510	chromatin interactions

Extended variants
information (count: 6359 )
Associated
traits (count: 81 )

Variant overlapped rSNPs/rCNVs (count:6359 , 50 per page) page: 1 2 3 4 5 6 7 ... 128

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs111675661	chr7:3650883-3650884	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs145741755	chr7:3650885-3650886	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs369547244	chr7:3650903-3650904	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs77327407	chr7:3650914-3650915	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs373346241	chr7:3650916-3650917	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs566670232	chr7:3650926-3650927	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs535689535	chr7:3650967-3650968	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs555685323	chr7:3651016-3651017	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs76712761	chr7:3651045-3651046	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs537414381	chr7:3651048-3651049	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs557749886	chr7:3651058-3651059	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs138272518	chr7:3651075-3651076	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs115694104	chr7:3651079-3651080	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs553495186	chr7:3651110-3651111	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs75411351	chr7:3651113-3651114	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs186081939	chr7:3651161-3651162	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs533464546	chr7:3651162-3651163	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs562018718	chr7:3651187-3651188	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs58699986	chr7:3651196-3651197	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs116595456	chr7:3651210-3651211	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs77895042	chr7:3651212-3651213	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs375470476	chr7:3651226-3651227	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs551993784	chr7:3651235-3651236	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs564510588	chr7:3651241-3651242	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs192191917	chr7:3651249-3651250	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs142774240	chr7:3651252-3651253	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs146049623	chr7:3651263-3651264	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs181783012	chr7:3651274-3651275	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs529079067	chr7:3651280-3651281	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs186313493	chr7:3651286-3651287	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs190337918	chr7:3651295-3651296	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs139026990	chr7:3651297-3651298	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs573046269	chr7:3651298-3651299	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs540599093	chr7:3651300-3651301	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs565169007	chr7:3651327-3651328	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs571215932	chr7:3651373-3651374	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs532805480	chr7:3651378-3651379	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs533580158	chr7:3651385-3651386	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs114710632	chr7:3651393-3651394	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs73039611	chr7:3651397-3651398	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
41	rs541986136	chr7:3651398-3651399	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs182895034	chr7:3651414-3651415	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs575803837	chr7:3651418-3651419	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs6961261	chr7:3651419-3651420	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
45	rs564667839	chr7:3651422-3651423	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs533347335	chr7:3651430-3651431	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs540661228	chr7:3651436-3651437	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs186525727	chr7:3651437-3651438	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs78115500	chr7:3651453-3651454	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs149438311	chr7:3651464-3651465	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:81)

Disease	PMID	Source
Malignant mesothelioma	18160781	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Chordoma	21602918	CNVD
Lynch syndrome	22585707	CNVD
Follicular lymphoma	20505157	CNVD
Breast cancer	16397240	CNVD
Raine Syndrome	17924334	CNVD
Diffuse large b-cell lymphoma	21266526	CNVD
Melanoma	18172304	CNVD
Sudden cardiac death	19188705	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Prostate cancer	16573809	CNVD
Glioma	18556773	CNVD
Ovarian cancer	21720365	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Ovarian cancer	22174824	CNVD
Urothelial carcinoma	18382360	CNVD
Medulloblastoma	21979893	CNVD
Lynch syndrome	18415027	CNVD
Biliary cancer	19435499	CNVD
Cancer	16751803	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Wilms tumour	21544195	CNVD
Glioblastoma multiforme	17387387	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Neuroblastoma	18923191	CNVD
Glioma	21971842	CNVD
Glioblastoma multiforme	21080181	CNVD
Liposarcoma	21253554	CNVD
Oligodendroglial tumors	17285580	CNVD
Oral cancer	21386901	CNVD
colon cancer	17210682	CNVD
Lung adenocarcinoma	21810691	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Colorectal cancer	19359472	CNVD
Hypothalamic hamartomas	18252217	CNVD
Human rectal carcinomas	16397240	CNVD
Peripheral t-cell lymphoma	19118030	CNVD
Medulloblastoma	18056178	CNVD
Basal cell lymphoma	17170743	CNVD
Ewing''s sarcoma	21437220	CNVD
Thyroid cancer	19087340	CNVD
Seminomas	18059402	CNVD
Testicular cancer	18059402	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Autism	19415332	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
T-cell lymphomas	19863542	CNVD
Malaria	21533027	CNVD
Renal cell carcinoma	19461508	CNVD
head and neck squamous cell carcinoma	19289630	CNVD
Stenocardia	21860640	CNVD
Vasospasm	21860640	CNVD
Developmental delay	21147756	CNVD
Prostate cancer	18632612	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Thoracic aortic aneurysm	21092924	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Ewing''s sarcoma	17952124	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21364760	CNVD
Nasopharyngeal cancer	20548289	CNVD
Autism	22495311	CNVD
Lung cancer	18438408	CNVD
small cell lung cancer	20016488	CNVD
Leukemia	23979775	CNVD
Spondylocostal dysostosis	21085971	CNVD
Mental retardation	17901693	CNVD
Heart disease	21282601	CNVD
Glioblastoma multiforme	22286061	CNVD
lymphocytic leukemia	21291569	CNVD
Basal cell lymphoma	17053054	CNVD
Cancer	20164920	CNVD
Pancreatic cancer	17952125	CNVD
Colorectal cancer	21645411	CNVD
Intellectual disability	21811512	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD

Chromatin state (count:367 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:3636400-3655800	Weak transcription	Aorta	Aorta
2	chr7:3645200-3660400	Weak transcription	HepG2	liver
3	chr7:3646400-3657200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr7:3649600-3673400	Weak transcription	Pancreas	Pancrea
5	chr7:3650400-3651000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
6	chr7:3654200-3654400	Enhancers	Fetal Brain Male	brain
7	chr7:3654400-3655200	Weak transcription	Fetal Brain Male	brain
8	chr7:3654400-3667600	Weak transcription	Colon Smooth Muscle	Colon
9	chr7:3655000-3655400	Active TSS	Fetal Lung	lung
10	chr7:3655200-3655600	Enhancers	Fetal Brain Male	brain
11	chr7:3655400-3655600	Enhancers	Fetal Intestine Large	intestine
12	chr7:3655400-3662000	Weak transcription	Fetal Lung	lung
13	chr7:3655600-3656200	Enhancers	Gastric	stomach
14	chr7:3655800-3656200	ZNF genes & repeats	Aorta	Aorta
15	chr7:3656000-3656200	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
16	chr7:3656200-3657400	Weak transcription	Aorta	Aorta
17	chr7:3656200-3660000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
18	chr7:3656600-3656800	Enhancers	Pancreatic Islets	Pancreatic Islet
19	chr7:3656800-3658600	Weak transcription	Pancreatic Islets	Pancreatic Islet
20	chr7:3656800-3668800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
21	chr7:3657400-3657600	ZNF genes & repeats	Aorta	Aorta
22	chr7:3657400-3665000	Weak transcription	Spleen	Spleen
23	chr7:3657400-3669800	Weak transcription	Fetal Stomach	stomach
24	chr7:3657600-3659200	Weak transcription	Aorta	Aorta
25	chr7:3657600-3660000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
26	chr7:3657600-3661000	Weak transcription	Stomach Smooth Muscle	stomach
27	chr7:3659200-3659800	Strong transcription	Aorta	Aorta
28	chr7:3659200-3684400	Weak transcription	Right Ventricle	heart
29	chr7:3659800-3660200	Weak transcription	Aorta	Aorta
30	chr7:3660000-3660800	Strong transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
31	chr7:3660000-3660800	Strong transcription	Breast Myoepithelial Primary Cells	Breast
32	chr7:3660200-3660800	Strong transcription	Aorta	Aorta
33	chr7:3660400-3660600	Enhancers	HepG2	liver
34	chr7:3660800-3663400	Weak transcription	Aorta	Aorta
35	chr7:3660800-3666200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
36	chr7:3660800-3666600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
37	chr7:3661400-3674600	Weak transcription	Muscle Satellite Cultured Cells	--
38	chr7:3662600-3668200	Weak transcription	Fetal Intestine Small	intestine
39	chr7:3665000-3665600	Enhancers	Spleen	Spleen
40	chr7:3666200-3667000	Strong transcription	Breast Myoepithelial Primary Cells	Breast
41	chr7:3666600-3667400	Strong transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
42	chr7:3667000-3667200	ZNF genes & repeats	Breast Myoepithelial Primary Cells	Breast
43	chr7:3667400-3678600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
44	chr7:3669800-3670400	ZNF genes & repeats	Pancreatic Islets	Pancreatic Islet
45	chr7:3670400-3686600	Weak transcription	Pancreatic Islets	Pancreatic Islet
46	chr7:3670600-3670800	ZNF genes & repeats	Aorta	Aorta
47	chr7:3670600-3671000	ZNF genes & repeats	Fetal Intestine Small	intestine
48	chr7:3670800-3673400	Weak transcription	Aorta	Aorta
49	chr7:3671000-3678600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
50	chr7:3671000-3695600	Weak transcription	Fetal Intestine Small	intestine

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links