No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs551419394 |
chr7:19152955-19152956 |
Weak transcription Active TSS Flanking Active TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3'
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
2 |
rs181452542 |
chr7:19153007-19153008 |
Weak transcription Flanking Active TSS Active TSS Genic enhancers Strong transcription Enhancers Transcr. at gene 5' and 3'
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
3 |
rs186038476 |
chr7:19153073-19153074 |
Weak transcription Flanking Active TSS Active TSS Genic enhancers Strong transcription Enhancers Transcr. at gene 5' and 3'
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
4 |
rs549007062 |
chr7:19153077-19153078 |
Weak transcription Flanking Active TSS Active TSS Genic enhancers Strong transcription Enhancers Transcr. at gene 5' and 3'
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
5 |
rs567565512 |
chr7:19153102-19153103 |
Weak transcription Flanking Active TSS Active TSS Genic enhancers Strong transcription Enhancers Transcr. at gene 5' and 3'
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
6 |
rs538171657 |
chr7:19153116-19153117 |
Weak transcription Flanking Active TSS Active TSS Genic enhancers Strong transcription Enhancers Transcr. at gene 5' and 3'
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
7 |
rs549696656 |
chr7:19153139-19153140 |
Weak transcription Flanking Active TSS Active TSS Genic enhancers Strong transcription Enhancers Transcr. at gene 5' and 3'
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
8 |
rs571388945 |
chr7:19153161-19153162 |
Weak transcription Flanking Active TSS Active TSS Genic enhancers Strong transcription Enhancers Transcr. at gene 5' and 3'
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
9 |
rs546216130 |
chr7:19153182-19153183 |
Weak transcription Flanking Active TSS Active TSS Genic enhancers Strong transcription Enhancers Transcr. at gene 5' and 3'
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
10 |
rs557784093 |
chr7:19153223-19153224 |
Weak transcription Active TSS Flanking Active TSS Genic enhancers Strong transcription Enhancers Transcr. at gene 5' and 3'
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
11 |
rs115126052 |
chr7:19153233-19153234 |
Weak transcription Active TSS Flanking Active TSS Genic enhancers Strong transcription Enhancers Transcr. at gene 5' and 3'
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
12 |
rs570847958 |
chr7:19153243-19153244 |
Weak transcription Active TSS Flanking Active TSS Genic enhancers Strong transcription Enhancers Transcr. at gene 5' and 3'
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
13 |
rs533924157 |
chr7:19153249-19153250 |
Weak transcription Active TSS Flanking Active TSS Genic enhancers Strong transcription Enhancers Transcr. at gene 5' and 3'
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
14 |
rs191271775 |
chr7:19153290-19153291 |
Weak transcription Active TSS Flanking Active TSS Genic enhancers Strong transcription Enhancers Transcr. at gene 5' and 3'
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
15 |
rs2522196 |
chr7:19153297-19153298 |
Weak transcription Active TSS Flanking Active TSS Genic enhancers Strong transcription Enhancers Transcr. at gene 5' and 3'
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
16 |
rs552971033 |
chr7:19153305-19153306 |
Weak transcription Active TSS Flanking Active TSS Genic enhancers Strong transcription Enhancers Transcr. at gene 5' and 3'
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
17 |
rs371556595 |
chr7:19153307-19153308 |
Weak transcription Active TSS Flanking Active TSS Genic enhancers Strong transcription Enhancers Transcr. at gene 5' and 3'
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
18 |
rs11973396 |
chr7:19153320-19153321 |
Weak transcription Active TSS Flanking Active TSS Genic enhancers Strong transcription Enhancers Transcr. at gene 5' and 3'
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
19 |
rs550177245 |
chr7:19153364-19153365 |
Weak transcription Active TSS Flanking Active TSS Genic enhancers Strong transcription Enhancers Transcr. at gene 5' and 3'
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
20 |
rs544924008 |
chr7:19153403-19153404 |
Weak transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Enhancers
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
21 |
rs376237444 |
chr7:19153424-19153425 |
Weak transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Enhancers
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
22 |
rs149172562 |
chr7:19153477-19153478 |
Weak transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Enhancers
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
23 |
rs541926299 |
chr7:19153480-19153481 |
Weak transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Enhancers
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
24 |
rs578100951 |
chr7:19153494-19153495 |
Weak transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Enhancers
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
25 |
rs4721745 |
chr7:19153512-19153513 |
Weak transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Enhancers
|
lncRNA
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
26 |
rs538102464 |
chr7:19153522-19153523 |
Weak transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Enhancers
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
27 |
rs560247934 |
chr7:19153542-19153543 |
Weak transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Enhancers
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
28 |
rs376130922 |
chr7:19153602-19153603 |
Weak transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3'
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
29 |
rs183024374 |
chr7:19153633-19153634 |
Weak transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3'
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
30 |
rs548978712 |
chr7:19153700-19153701 |
Weak transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3'
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
31 |
rs369514359 |
chr7:19153715-19153716 |
Weak transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3'
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
32 |
rs560902865 |
chr7:19153725-19153726 |
Weak transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3'
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
33 |
rs376670936 |
chr7:19153765-19153766 |
Weak transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3'
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
34 |
rs4721746 |
chr7:19153843-19153844 |
Weak transcription Active TSS Flanking Active TSS Transcr. at gene 5' and 3'
|
lncRNA
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
35 |
rs550021426 |
chr7:19153946-19153947 |
Weak transcription Active TSS Flanking Active TSS Transcr. at gene 5' and 3'
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
36 |
rs571454453 |
chr7:19153983-19153984 |
Weak transcription Active TSS Flanking Active TSS Transcr. at gene 5' and 3'
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
37 |
rs373978050 |
chr7:19154024-19154025 |
Weak transcription Bivalent Enhancer Active TSS Flanking Active TSS Transcr. at gene 5' and 3'
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
38 |
rs143230344 |
chr7:19154042-19154043 |
Weak transcription Bivalent Enhancer Active TSS Flanking Active TSS Transcr. at gene 5' and 3'
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
39 |
rs372093251 |
chr7:19154050-19154051 |
Weak transcription Bivalent Enhancer Active TSS Flanking Active TSS Transcr. at gene 5' and 3'
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
40 |
rs547230973 |
chr7:19154052-19154053 |
Weak transcription Bivalent Enhancer Active TSS Flanking Active TSS Transcr. at gene 5' and 3'
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
41 |
rs543627377 |
chr7:19154081-19154082 |
Weak transcription Bivalent Enhancer Active TSS Flanking Active TSS Transcr. at gene 5' and 3'
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
42 |
rs138795134 |
chr7:19154097-19154098 |
Weak transcription Bivalent Enhancer Active TSS Flanking Active TSS Transcr. at gene 5' and 3'
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
43 |
rs187764343 |
chr7:19154115-19154116 |
Weak transcription Bivalent Enhancer Active TSS Flanking Active TSS Transcr. at gene 5' and 3'
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
44 |
rs141958920 |
chr7:19154123-19154124 |
Weak transcription Bivalent Enhancer Active TSS Flanking Active TSS Transcr. at gene 5' and 3'
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
45 |
rs567616355 |
chr7:19154170-19154171 |
Weak transcription Bivalent Enhancer Active TSS Flanking Active TSS Transcr. at gene 5' and 3'
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
46 |
rs190850527 |
chr7:19154226-19154227 |
Weak transcription Bivalent Enhancer Bivalent/Poised TSS Active TSS Flanking Active TSS Transcr. at gene 5' and 3'
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
47 |
rs556766786 |
chr7:19154228-19154229 |
Weak transcription Bivalent Enhancer Bivalent/Poised TSS Active TSS Flanking Active TSS Transcr. at gene 5' and 3'
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
48 |
rs559128718 |
chr7:19154238-19154239 |
Weak transcription Bivalent Enhancer Bivalent/Poised TSS Active TSS Flanking Active TSS Transcr. at gene 5' and 3'
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
49 |
rs35252838 |
chr7:19154277-19154278 |
Weak transcription Bivalent Enhancer Bivalent/Poised TSS Active TSS Flanking Active TSS Transcr. at gene 5' and 3'
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
50 |
rs36046091 |
chr7:19154321-19154322 |
Weak transcription Bivalent Enhancer Bivalent/Poised TSS Active TSS Flanking Active TSS Transcr. at gene 5' and 3'
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|