Variant report

Variant	nsv539064
Chromosome Location	chr7:110786548-111092491
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1859)
CpG islands
(count:366)
Chromatin interactive
region (count:215)
LncRNA
region (count:1)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1859 , 50 per page) page: 1 2 3 4 5 6 7 ... 38

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr7:110832610-110833023	HepG2	liver:	n/a	n/a
2	ARID3A	chr7:110869353-110869485	K562	blood:	n/a	n/a
3	ARID3A	chr7:111077670-111079453	K562	blood:	n/a	chr7:111078420-111078436 chr7:111078560-111078576
4	ARID3A	chr7:111024781-111024793	K562	blood:	n/a	n/a
5	ARID3A	chr7:110968691-110969273	K562	blood:	n/a	n/a
6	ARID3A	chr7:110969611-110970170	K562	blood:	n/a	n/a
7	ARID3A	chr7:110967767-110967878	K562	blood:	n/a	n/a
8	ARID3A	chr7:110830821-110831569	K562	blood:	n/a	n/a
9	ARID3A	chr7:110895612-110896118	K562	blood:	n/a	n/a
10	ARID3A	chr7:111008626-111008764	K562	blood:	n/a	n/a
11	ARID3A	chr7:110863537-110864343	K562	blood:	n/a	chr7:110863547-110863563 chr7:110863548-110863564
12	ARID3A	chr7:110953154-110953413	K562	blood:	n/a	n/a
13	ARID3A	chr7:110802820-110803056	HepG2	liver:	n/a	n/a
14	ARID3A	chr7:110997534-110997571	K562	blood:	n/a	n/a
15	ARID3A	chr7:110968080-110968421	K562	blood:	n/a	n/a
16	ARID3A	chr7:110821607-110821614	K562	blood:	n/a	n/a
17	ARID3A	chr7:111021038-111021344	HepG2	liver:	n/a	n/a
18	ARID3A	chr7:110946747-110946768	K562	blood:	n/a	n/a
19	ARID3A	chr7:111064774-111065198	HepG2	liver:	n/a	n/a
20	ARID3A	chr7:110966486-110967469	K562	blood:	n/a	n/a
21	ATF1	chr7:111054516-111054769	K562	blood:	n/a	n/a
22	ATF1	chr7:110895660-110895855	K562	blood:	n/a	n/a
23	ATF1	chr7:110830910-110831249	K562	blood:	n/a	n/a
24	ATF1	chr7:111012802-111012930	K562	blood:	n/a	n/a
25	ATF1	chr7:111078600-111078973	K562	blood:	n/a	n/a
26	ATF1	chr7:110889894-110890092	K562	blood:	n/a	n/a
27	ATF1	chr7:110863987-110864363	K562	blood:	n/a	n/a
28	ATF2	chr7:111053704-111054218	H1-hESC	embryonic stem cell:	n/a	n/a
29	ATF3	chr7:110838322-110838906	HCT-116	colon:	n/a	n/a
30	ATF3	chr7:110872430-110873085	A549	lung:	n/a	n/a
31	ATF3	chr7:111078506-111078989	K562	blood:	n/a	n/a
32	BACH1	chr7:110864793-110865013	K562	blood:	n/a	n/a
33	BACH1	chr7:110935269-110935465	K562	blood:	n/a	n/a
34	BATF	chr7:110960156-110960503	GM12878	blood:	n/a	n/a
35	BATF	chr7:110992517-110992735	GM12878	blood:	n/a	n/a
36	BATF	chr7:110872606-110872814	GM12878	blood:	n/a	chr7:110872713-110872724 chr7:110872714-110872724
37	BATF	chr7:110872545-110872818	GM12878	blood:	n/a	chr7:110872713-110872724 chr7:110872714-110872724
38	BATF	chr7:111029015-111029334	GM12878	blood:	n/a	n/a
39	BCL11A	chr7:111029036-111029324	GM12878	blood:	n/a	n/a
40	BHLHE40	chr7:110863735-110864331	K562	blood:	n/a	n/a
41	BHLHE40	chr7:110814285-110814288	K562	blood:	n/a	n/a
42	BHLHE40	chr7:110964357-110964616	GM12878	blood:	n/a	n/a
43	BHLHE40	chr7:111078559-111079458	K562	blood:	n/a	n/a
44	BHLHE40	chr7:110830940-110831167	K562	blood:	n/a	n/a
45	BHLHE40	chr7:110913546-110913742	K562	blood:	n/a	n/a
46	BHLHE40	chr7:110858674-110858794	K562	blood:	n/a	n/a
47	BHLHE40	chr7:110801784-110801856	GM12878	blood:	n/a	n/a
48	BRCA1	chr7:110838357-110838733	Hela-S3	cervix:	n/a	n/a
49	CBX3	chr7:111079900-111081343	K562	blood:	n/a	n/a
50	CBX3	chr7:111078458-111079603	K562	blood:	n/a	n/a

(count:366 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr7:111086055-111086105	SK-N-SH_RA	brain:	n/a
2	chr7:111033064-111033114	Hela-S3	cervix:	n/a
3	chr7:110879415-110879465	MCF10A-Er-Src	breast:	n/a
4	chr7:111079100-111079150	PFSK-1	brain:	n/a
5	chr7:110838461-110838511	ovcar-3	ovarian:	n/a
6	chr7:110879415-110879465	HPAEpiC	pulmonary alveolar:	n/a
7	chr7:110838461-110838511	GM19239	blood:	n/a
8	chr7:110879415-110879465	HIPEpiC	eye:	n/a
9	chr7:110838461-110838511	Caco-2	colon:	n/a
10	chr7:110879415-110879465	ECC-1	luminal epithelium:	n/a
11	chr7:110838461-110838511	HRCEpiC	kidney:	n/a
12	chr7:110879415-110879465	T-47D	breast:	n/a
13	chr7:111079100-111079150	SK-N-MC	brain:	n/a
14	chr7:110838461-110838511	HEK293	kidney:	embryo
15	chr7:111079100-111079150	NB4	blood:	n/a
16	chr7:111033064-111033114	HRE	kidney:	n/a
17	chr7:111079100-111079150	HCM	heart:	n/a
18	chr7:110838461-110838511	HRPEpiC	eye:	n/a
19	chr7:110879415-110879465	RPTEC	kidney:	n/a
20	chr7:111079100-111079150	MCF10A-Er-Src	breast:	n/a
21	chr7:110838461-110838511	SK-N-SH	brain:	n/a
22	chr7:110906785-110906835	AG09309	skin:	n/a
23	chr7:110838461-110838511	AG04450	lung:	fetal
24	chr7:110906785-110906835	Caco-2	colon:	n/a
25	chr7:111079100-111079150	PANC-1	pancreas:	n/a
26	chr7:110879415-110879465	HEEpiC	esophagus:	n/a
27	chr7:110906785-110906835	IMR90	lung:	fetal
28	chr7:110906785-110906835	BE2_C	brain:	n/a
29	chr7:111086055-111086105	A549	lung:	n/a
30	chr7:110906785-110906835	ECC-1	luminal epithelium:	n/a
31	chr7:110879415-110879465	SAEC	small airway:	n/a
32	chr7:111079100-111079150	IMR90	lung:	fetal
33	chr7:110879415-110879465	BE2_C	brain:	n/a
34	chr7:110838461-110838511	GM06990	blood:	n/a
35	chr7:111033064-111033114	H1-hESC	embryonic stem cell:	embryo
36	chr7:110838461-110838511	GM12891	blood:	n/a
37	chr7:111086055-111086105	HRPEpiC	eye:	n/a
38	chr7:111086055-111086105	Hela-S3	cervix:	n/a
39	chr7:110906785-110906835	PFSK-1	brain:	n/a
40	chr7:111079100-111079150	BE2_C	brain:	n/a
41	chr7:111033064-111033114	HRCEpiC	kidney:	n/a
42	chr7:111079100-111079150	Caco-2	colon:	n/a
43	chr7:111086055-111086105	HMEC	breast:	n/a
44	chr7:110879415-110879465	AG10803	skin:	n/a
45	chr7:110906785-110906835	HUVEC	blood vessel:	n/a
46	chr7:111033064-111033114	BJ	skin:	n/a
47	chr7:110838461-110838511	BE2_C	brain:	n/a
48	chr7:111086055-111086105	AG04449	skin:	fetal
49	chr7:110879415-110879465	HL-60	blood:	n/a
50	chr7:110906785-110906835	HEEpiC	esophagus:	n/a

(count:215 , 50 per page) page: 1 2 3 4 5

No.	Distal block	Cell Line	Cell type
1	chr7:110860948..110867491-chr7:110867576..110875570,9	K562	blood:
2	chr7:110964713..110967341-chr7:110967524..110969143,2	K562	blood:
3	chr7:110812015..110813631-chr7:110817074..110819107,2	K562	blood:
4	chr7:110969600..110972534-chr7:111078171..111081389,3	K562	blood:
5	chr7:110907955..110909675-chr7:110912861..110914751,2	K562	blood:
6	chr7:111078917..111081356-chr7:111081507..111085373,3	K562	blood:
7	chr7:110794617..110796472-chr7:110809802..110811971,2	K562	blood:
8	chr7:110794617..110796472-chr7:110809802..110811971,2	K562	blood:
9	chr7:110922885..110927148-chr7:110927337..110932171,6	K562	blood:
10	chr7:110970635..110973843-chr7:110975141..110978905,5	K562	blood:
11	chr7:110860948..110867491-chr7:110867576..110875570,9	K562	blood:
12	chr7:110958175..110962470-chr7:110967524..110970471,4	K562	blood:
13	chr7:110890356..110892390-chr7:110893967..110896589,2	K562	blood:
14	chr7:110962126..110964268-chr7:110964422..110967257,2	K562	blood:
15	chr7:110787029..110788702-chr7:110791625..110793971,2	K562	blood:
16	chr7:110829508..110831617-chr7:110846112..110848748,2	K562	blood:
17	chr7:110790879..110793527-chr7:110798511..110801255,3	K562	blood:
18	chr7:110858722..110860508-chr7:110869419..110871427,2	K562	blood:
19	chr7:111003207..111005251-chr7:111008050..111010228,2	K562	blood:
20	chr7:110948192..110950310-chr7:110952497..110954721,2	K562	blood:
21	chr7:111030397..111032923-chr7:111067377..111070241,2	K562	blood:
22	chr7:110968689..110972135-chr7:110972915..110976641,3	K562	blood:
23	chr7:110807402..110810065-chr7:110811637..110813724,2	K562	blood:
24	chr7:110843078..110844596-chr7:110851457..110854141,2	K562	blood:
25	chr7:110946494..110948605-chr7:110949688..110952299,2	K562	blood:
26	chr7:110946494..110948605-chr7:110949688..110952299,2	K562	blood:
27	chr7:111001961..111006807-chr7:111013802..111016795,4	K562	blood:
28	chr7:110958175..110961174-chr7:110967524..110969443,2	K562	blood:
29	chr7:111003207..111005251-chr7:111008050..111010228,2	K562	blood:
30	chr7:110827684..110829363-chr7:110849997..110851639,2	K562	blood:
31	chr7:110828459..110830042-chr7:110834757..110837365,2	K562	blood:
32	chr7:110845330..110847607-chr7:110862386..110864699,2	K562	blood:
33	chr7:110985007..110987369-chr7:110994363..110996141,2	K562	blood:
34	chr7:110929795..110932437-chr7:110933207..110936083,3	K562	blood:
35	chr12:108200986..108203742-chr7:111052172..111055145,3	MCF-7	breast:
36	chr7:110846499..110848352-chr7:110867218..110869031,2	MCF-7	breast:
37	chr12:108202177..108204461-chr7:111052206..111055078,3	MCF-7	breast:
38	chr7:111050830..111052648-chr7:111066245..111068187,2	K562	blood:
39	chr7:110962126..110964268-chr7:110964422..110967257,2	K562	blood:
40	chr7:110919663..110921773-chr7:111080756..111083394,2	K562	blood:
41	chr7:110989989..110992007-chr7:110993979..110995982,2	K562	blood:
42	chr7:110901427..110902958-chr7:110904579..110907166,2	MCF-7	breast:
43	chr7:110729634..110730189-chr7:110952732..110953606,2	MCF-7	breast:
44	chr7:110846458..110850024-chr7:110851219..110853852,3	MCF-7	breast:
45	chr7:110846405..110848807-chr7:110859320..110861910,2	K562	blood:
46	chr7:110865069..110867467-chr7:110870810..110872460,2	K562	blood:
47	chr7:111017537..111020347-chr7:111082285..111084321,2	K562	blood:
48	chr7:110964713..110967341-chr7:110967524..110969143,2	K562	blood:
49	chr7:110799581..110802084-chr7:110811577..110813562,2	K562	blood:
50	chr7:110973996..110977417-chr7:110978130..110980823,3	K562	blood:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-DOCK4-7	chr7:110902289-110902553	expReg_chr7_8342_-

No data

Variant related genes	Relation type
ENSG00000227948	TF binding region
IMMP2L	TF binding region
ENSG00000243621	TF binding region
ENSG00000227948	CpG island
IMMP2L	CpG island
ENSG00000243621	CpG island
ENSG00000136856	chromatin interactions
ENSG00000227948	chromatin interactions
ENSG00000188825	chromatin interactions
ENSG00000243621	chromatin interactions
ENSG00000184903	chromatin interactions

Extended variants
information (count: 10243 )
Associated
traits (count: 99 )

Variant overlapped rSNPs/rCNVs (count:10243 , 50 per page) page: 1 2 3 4 5 6 7 ... 205

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs535098175	chr7:110786673-110786674	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs554592695	chr7:110786677-110786678	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs541039163	chr7:110786708-110786709	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs559361138	chr7:110786723-110786724	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs574484485	chr7:110786727-110786728	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs543372749	chr7:110786767-110786768	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs563245165	chr7:110786771-110786772	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs369084159	chr7:110786784-110786785	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs186302561	chr7:110786790-110786791	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs559477370	chr7:110786810-110786811	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs528220511	chr7:110786812-110786813	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs191950508	chr7:110786813-110786814	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs140188664	chr7:110786912-110786913	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs530520302	chr7:110786913-110786914	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs182938412	chr7:110786947-110786948	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs570271430	chr7:110786987-110786988	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs539306288	chr7:110787050-110787051	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs187908608	chr7:110787155-110787156	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs538868889	chr7:110787171-110787172	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs566261659	chr7:110787204-110787205	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs112109303	chr7:110787209-110787210	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs192394255	chr7:110787237-110787238	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs574545966	chr7:110787265-110787266	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs376896413	chr7:110787275-110787276	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs557308626	chr7:110787281-110787282	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs2107149	chr7:110787316-110787317	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs552936132	chr7:110787342-110787343	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs183344439	chr7:110787385-110787386	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs374894168	chr7:110787388-110787389	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs137884843	chr7:110787464-110787465	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs76256272	chr7:110787480-110787481	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs573001640	chr7:110787500-110787501	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs541997105	chr7:110787626-110787627	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs34727987	chr7:110787651-110787652	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs369034407	chr7:110787697-110787698	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs214841	chr7:110787736-110787737	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
37	rs188059990	chr7:110787762-110787763	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs544262092	chr7:110787776-110787777	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs117099636	chr7:110787820-110787821	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs532742115	chr7:110787830-110787831	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs192240802	chr7:110787895-110787896	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs566202963	chr7:110787905-110787906	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs77584674	chr7:110787906-110787907	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs141983785	chr7:110787911-110787912	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs184939312	chr7:110787914-110787915	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs537126651	chr7:110787916-110787917	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs189448979	chr7:110787918-110787919	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs192096697	chr7:110787942-110787943	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs539409031	chr7:110787954-110787955	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs10237613	chr7:110787970-110787971	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a

Variant related diseases (count:99)

Disease	PMID	Source
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Thyroid cancer	19087340	CNVD
Seminomas	18059402	CNVD
Testicular cancer	18059402	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Autism	19415332	CNVD
Medulloblastoma	21979893	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
T-cell lymphomas	19863542	CNVD
Malaria	21533027	CNVD
Melanoma	18172304	CNVD
Renal cell carcinoma	19461508	CNVD
head and neck squamous cell carcinoma	19289630	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	22495311	CNVD
Wilms tumour	21544195	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute myeloid leukemia	16864856	CNVD
Squamous cell cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Glioblastoma multiforme	17387387	CNVD
Low-grade fibromyxoid sarcoma	0	CNVD
Oligodendroglial tumors	17285580	CNVD
Endometrial cancer	22040021	CNVD
Burkitt''s lymphoma	18698080	CNVD
Breast cancer	21264507	CNVD
Shwachman-Diamond syndrome	22934832	CNVD
Colorectal cancer	19359472	CNVD
Cutaneous malignant melanoma	17690212	CNVD
Leukemia	17361228	CNVD
Breast cancer	16461572	CNVD
Peripheral t-cell lymphoma	19118030	CNVD
Malignant melanoma	17690212	CNVD
Renal cell carcinoma	18592004	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Multiple myeloma	17550852	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Neurodevelopmental disorder	22521361	CNVD
abortions and stillbirths	19751515	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Acute myeloid leukemia	20729466	CNVD
Lung cancer	18438408	CNVD
Metanephric adenoma	20802469	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Burkitt''s lymphoma	19759907	CNVD
Myelodysplastic syndrome	21251322	CNVD
Acute myeloid leukemia	21251322	CNVD
Breast cancer	21785460	CNVD
Chronic myeloid leukemia	21384125	CNVD
Breast cancer	21858162	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Breast cancer	21364760	CNVD
lymphocytic leukemia	21291569	CNVD
Basal cell lymphoma	17053054	CNVD
Prostate cancer	16573809	CNVD
Medulloblastoma	16783165	CNVD
Melanoma	17363583	CNVD
Myelofibrosis	22110671	CNVD
Squamous cell cancer	20885788	CNVD
T-cell acute lymphoblastic leukemia	19406988	CNVD
Breast cancer	16397240	CNVD
Biliary cancer	19435499	CNVD
Non-small cell lung cancer	21829676	CNVD
Ovarian neoplasms	16753589	CNVD
Prostate cancer	23792589	CNVD
Adenocarcinoma	21044232	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Autism	19401682	CNVD
Non-small cell lung cancer	19889201	CNVD
Acute myeloid leukemia	18000384	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Metastatic melanoma	18483359	CNVD
Autism	18414403	CNVD
Autism	19546859	CNVD
Schizophrenia	19546859	CNVD
Tourette syndrome	19546859	CNVD
Melanoma	19188590	CNVD
small cell lung cancer	20016488	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
T-cell lymphomas	22341440	CNVD
Cancer	20164919	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Dyslexia	22102821	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Attention deficit hyperactivity disorder	19546859	CNVD
Schizophrenia	23813976	CNVD
Autism	20531469	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Breast cancer	21509527	CNVD
Glioma	20126413	CNVD
early-passage human iPS cells	21368824	CNVD
Pancreatic cancer	17952125	CNVD
Autism	20841430	CNVD

Chromatin state (count:1336 , 50 per page) page: 1 2 3 4 5 6 7 ... 27

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:110778000-110787400	Weak transcription	Aorta	Aorta
2	chr7:110784400-110788000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
3	chr7:110785800-110787400	Weak transcription	Psoas Muscle	Psoas
4	chr7:110787400-110787800	Enhancers	Aorta	Aorta
5	chr7:110787400-110787800	Enhancers	Psoas Muscle	Psoas
6	chr7:110787800-110790400	Weak transcription	Aorta	Aorta
7	chr7:110788000-110788200	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
8	chr7:110788200-110788600	Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
9	chr7:110788600-110788800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
10	chr7:110790400-110790600	Enhancers	Aorta	Aorta
11	chr7:110794800-110795000	Enhancers	Left Ventricle	heart
12	chr7:110796800-110797400	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
13	chr7:110797000-110797400	Enhancers	Primary T helper cells PMA-I stimulated	--
14	chr7:110797000-110797400	Enhancers	Dnd41	blood
15	chr7:110797000-110797600	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
16	chr7:110799000-110803000	Enhancers	Muscle Satellite Cultured Cells	--
17	chr7:110799200-110799600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
18	chr7:110799400-110800000	Enhancers	NHEK	skin
19	chr7:110799400-110800200	Enhancers	HMEC	breast
20	chr7:110799400-110800200	Enhancers	NH-A	brain
21	chr7:110799400-110800200	Enhancers	Osteobl	bone
22	chr7:110799400-110800600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
23	chr7:110799400-110800600	Enhancers	NHDF-Ad	bronchial
24	chr7:110799600-110800200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
25	chr7:110799600-110800200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
26	chr7:110799600-110804400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
27	chr7:110800200-110801200	Weak transcription	Osteobl	bone
28	chr7:110800600-110801000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
29	chr7:110801000-110801800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
30	chr7:110801200-110801800	Enhancers	Osteobl	bone
31	chr7:110801800-110802600	Weak transcription	Osteobl	bone
32	chr7:110802200-110803600	Enhancers	HepG2	liver
33	chr7:110802600-110802800	Enhancers	Osteobl	bone
34	chr7:110803000-110803400	Enhancers	Lung	lung
35	chr7:110803400-110808000	Weak transcription	Lung	lung
36	chr7:110804400-110804600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
37	chr7:110804400-110805200	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
38	chr7:110804600-110805400	Enhancers	Cortex derived primary cultured neurospheres	brain
39	chr7:110805000-110805400	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
40	chr7:110805400-110807000	Weak transcription	Cortex derived primary cultured neurospheres	brain
41	chr7:110805400-110807400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
42	chr7:110805800-110806000	Enhancers	Psoas Muscle	Psoas
43	chr7:110806600-110806800	Enhancers	Psoas Muscle	Psoas
44	chr7:110807000-110809200	Enhancers	Cortex derived primary cultured neurospheres	brain
45	chr7:110807400-110809000	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
46	chr7:110807800-110808600	Enhancers	Pancreatic Islets	Pancreatic Islet
47	chr7:110808200-110808600	Enhancers	NHDF-Ad	bronchial
48	chr7:110808200-110809000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
49	chr7:110808400-110808600	Enhancers	Colon Smooth Muscle	Colon
50	chr7:110808400-110808600	Enhancers	Fetal Brain Male	brain

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links