Variant report

Variant	nsv539119
Chromosome Location	chr7:126067684-126587859
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:3088)
CpG islands
(count:610)
Chromatin interactive
region (count:195)
LncRNA
region (count:2)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:3088 , 50 per page) page: 1 2 3 4 5 6 7 ... 62

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr7:126340865-126341700	K562	blood:	n/a	n/a
2	ARID3A	chr7:126430920-126431186	K562	blood:	n/a	n/a
3	ARID3A	chr7:126430964-126431152	HepG2	liver:	n/a	n/a
4	ARID3A	chr7:126338628-126340199	K562	blood:	n/a	n/a
5	ARID3A	chr7:126443225-126443439	HepG2	liver:	n/a	n/a
6	ARID3A	chr7:126297717-126297956	HepG2	liver:	n/a	n/a
7	ATF1	chr7:126148916-126149043	K562	blood:	n/a	n/a
8	ATF1	chr7:126249548-126249552	K562	blood:	n/a	n/a
9	ATF1	chr7:126367981-126368266	K562	blood:	n/a	n/a
10	ATF1	chr7:126586391-126586455	K562	blood:	n/a	n/a
11	ATF1	chr7:126353749-126353899	K562	blood:	n/a	n/a
12	ATF1	chr7:126489638-126489672	K562	blood:	n/a	n/a
13	ATF1	chr7:126509086-126509186	K562	blood:	n/a	n/a
14	ATF1	chr7:126339088-126339298	K562	blood:	n/a	n/a
15	ATF1	chr7:126340908-126341518	K562	blood:	n/a	n/a
16	ATF2	chr7:126341103-126341430	H1-hESC	embryonic stem cell:	n/a	n/a
17	ATF2	chr7:126360214-126360766	GM12878	blood:	n/a	n/a
18	ATF2	chr7:126336662-126337199	GM12878	blood:	n/a	n/a
19	ATF2	chr7:126341845-126342732	GM12878	blood:	n/a	n/a
20	ATF2	chr7:126297366-126298397	GM12878	blood:	n/a	n/a
21	ATF2	chr7:126341740-126342966	GM12878	blood:	n/a	n/a
22	ATF2	chr7:126297338-126298416	GM12878	blood:	n/a	n/a
23	ATF2	chr7:126336597-126337211	GM12878	blood:	n/a	n/a
24	ATF2	chr7:126340876-126341789	GM12878	blood:	n/a	n/a
25	ATF2	chr7:126340840-126341677	GM12878	blood:	n/a	n/a
26	ATF2	chr7:126299043-126299755	GM12878	blood:	n/a	n/a
27	ATF2	chr7:126298945-126299651	GM12878	blood:	n/a	n/a
28	ATF2	chr7:126360242-126360703	GM12878	blood:	n/a	n/a
29	ATF3	chr7:126340986-126341549	K562	blood:	n/a	n/a
30	BACH1	chr7:126171883-126172029	H1-hESC	embryonic stem cell:	n/a	n/a
31	BACH1	chr7:126341018-126341794	H1-hESC	embryonic stem cell:	n/a	n/a
32	BACH1	chr7:126340615-126341754	K562	blood:	n/a	n/a
33	BACH1	chr7:126317779-126317847	K562	blood:	n/a	n/a
34	BACH1	chr7:126120721-126120800	K562	blood:	n/a	n/a
35	BATF	chr7:126340969-126341527	GM12878	blood:	n/a	chr7:126341215-126341225 chr7:126341372-126341383 chr7:126341373-126341383
36	BATF	chr7:126342247-126342781	GM12878	blood:	n/a	n/a
37	BATF	chr7:126084070-126084326	GM12878	blood:	n/a	chr7:126084174-126084185
38	BATF	chr7:126341073-126341635	GM12878	blood:	n/a	chr7:126341215-126341225 chr7:126341372-126341383 chr7:126341373-126341383
39	BATF	chr7:126360300-126360654	GM12878	blood:	n/a	n/a
40	BATF	chr7:126297695-126297999	GM12878	blood:	n/a	n/a
41	BATF	chr7:126299280-126299606	GM12878	blood:	n/a	n/a
42	BATF	chr7:126336694-126337046	GM12878	blood:	n/a	n/a
43	BATF	chr7:126197301-126197638	GM12878	blood:	n/a	n/a
44	BATF	chr7:126141768-126142023	GM12878	blood:	n/a	n/a
45	BATF	chr7:126197396-126197676	GM12878	blood:	n/a	n/a
46	BATF	chr7:126551713-126552013	GM12878	blood:	n/a	chr7:126551879-126551890
47	BATF	chr7:126299184-126299602	GM12878	blood:	n/a	n/a
48	BATF	chr7:126297639-126298072	GM12878	blood:	n/a	n/a
49	BATF	chr7:126421013-126421442	GM12878	blood:	n/a	n/a
50	BATF	chr7:126342265-126342743	GM12878	blood:	n/a	n/a

(count:610 , 50 per page) page: 1 2 3 4 5 6 7 ... 13

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr7:126364460-126364510	MCF-7	breast:	n/a
2	chr7:126417126-126417176	HRPEpiC	eye:	n/a
3	chr7:126446422-126446472	AG04449	skin:	fetal
4	chr7:126079083-126079133	ECC-1	luminal epithelium:	n/a
5	chr7:126417956-126418006	T-47D	breast:	n/a
6	chr7:126446875-126446925	GM12892	blood:	n/a
7	chr7:126446519-126446569	AG10803	skin:	n/a
8	chr7:126417956-126418006	NH-A	brain:	n/a
9	chr7:126446422-126446472	NT2-D1	testis:	n/a
10	chr7:126364460-126364510	NHBE	bronchial:	n/a
11	chr7:126446422-126446472	NHDF-neo	bronchial:	n/a
12	chr7:126417126-126417176	ECC-1	luminal epithelium:	n/a
13	chr7:126417126-126417176	NB4	blood:	n/a
14	chr7:126417956-126418006	PrEC	prostate:	n/a
15	chr7:126165242-126165292	MCF10A-Er-Src	breast:	n/a
16	chr7:126364460-126364510	GM06990	blood:	n/a
17	chr7:126446519-126446569	HAEpiC	amniotic membrane:	n/a
18	chr7:126446875-126446925	A549	lung:	n/a
19	chr7:126079083-126079133	Jurkat	blood:	n/a
20	chr7:126275080-126275130	HUVEC	blood vessel:	n/a
21	chr7:126446519-126446569	MCF10A-Er-Src	breast:	n/a
22	chr7:126446875-126446925	HNPCEpiC	eye:	n/a
23	chr7:126364460-126364510	AoSMC	blood vessel:	n/a
24	chr7:126446875-126446925	HCF	heart:	n/a
25	chr7:126446875-126446925	RPTEC	kidney:	n/a
26	chr7:126446422-126446472	GM12878	blood:	n/a
27	chr7:126364460-126364510	GM12891	blood:	n/a
28	chr7:126165242-126165292	AoSMC	blood vessel:	n/a
29	chr7:126364460-126364510	AG10803	skin:	n/a
30	chr7:126417956-126418006	MCF-7	breast:	n/a
31	chr7:126446422-126446472	MCF-7	breast:	n/a
32	chr7:126446519-126446569	PFSK-1	brain:	n/a
33	chr7:126275080-126275130	AG04449	skin:	fetal
34	chr7:126446519-126446569	HCM	heart:	n/a
35	chr7:126275080-126275130	Jurkat	blood:	n/a
36	chr7:126446422-126446472	HRE	kidney:	n/a
37	chr7:126417126-126417176	MCF10A-Er-Src	breast:	n/a
38	chr7:126079083-126079133	BE2_C	brain:	n/a
39	chr7:126079083-126079133	HEEpiC	esophagus:	n/a
40	chr7:126417126-126417176	HCT-116	colon:	n/a
41	chr7:126364460-126364510	SK-N-SH	brain:	n/a
42	chr7:126364460-126364510	ovcar-3	ovarian:	n/a
43	chr7:126446422-126446472	GM12892	blood:	n/a
44	chr7:126364460-126364510	GM12878	blood:	n/a
45	chr7:126446875-126446925	AG04450	lung:	fetal
46	chr7:126446422-126446472	HCPEpiC	choroid plexus:	n/a
47	chr7:126446875-126446925	HRPEpiC	eye:	n/a
48	chr7:126446422-126446472	PrEC	prostate:	n/a
49	chr7:126165242-126165292	MCF-7	breast:	n/a
50	chr7:126446875-126446925	BJ	skin:	n/a

(count:195 , 50 per page) page: 1 2 3 4

No.	Distal block	Cell Line	Cell type	Cell Stage
1	7:126177569-126189146..7:126756671-126761022	K562	blood:
2	chr7:126309021..126312996-chr7:126337447..126339848,3	K562	blood:
3	chr7:126359092..126361580-chr7:126364293..126366745,2	K562	blood:
4	chr7:126335306..126336854-chr7:126339390..126341574,2	MCF-7	breast:
5	chr7:126314710..126317465-chr7:126320415..126322546,2	K562	blood:
6	7:126470017-126471969..7:126890676-126899918	H1-hESC	embryonic stem cell:	embryo
7	chr7:126296023..126300010-chr7:126305457..126308211,3	K562	blood:
8	7:126085913-126088095..7:126299213-126299975	GM12878	blood:
9	chr7:126312637..126315062-chr7:126328368..126330770,2	K562	blood:
10	chr7:126198359..126200482-chr7:126202205..126203879,2	K562	blood:
11	chr7:126338487..126341370-chr7:126368124..126371050,2	K562	blood:
12	7:126587367-126589276..7:126880504-126885902	H1-hESC	embryonic stem cell:	embryo
13	chr7:126586006..126588015-chr7:126594826..126596374,2	MCF-7	breast:
14	chr7:126443207..126444075-chr7:126540061..126540769,2	MCF-7	breast:
15	chr7:126577088..126579543-chr7:126581963..126584921,2	K562	blood:
16	chr7:126238270..126240602-chr7:126244223..126245944,2	K562	blood:
17	7:126441098-126445427..7:127233104-127239235	H1-hESC	embryonic stem cell:	embryo
18	chr7:126147698..126150261-chr7:126203102..126205183,2	K562	blood:
19	chr7:126300744..126304591-chr7:126306524..126308654,3	K562	blood:
20	7:126154600-126176992..7:126756671-126761022	H1-hESC	embryonic stem cell:	embryo
21	chr7:126359674..126361280-chr7:126368196..126369937,2	K562	blood:
22	7:126312146-126318123..7:127009457-127018926	GM12878	blood:
23	chr7:126312637..126315062-chr7:126328368..126330770,2	K562	blood:
24	chr7:126318252..126320938-chr7:126337348..126339547,3	K562	blood:
25	chr7:126345298..126347848-chr7:126367419..126370072,2	K562	blood:
26	7:126312146-126318123..7:127221502-127225864	H1-hESC	embryonic stem cell:	embryo
27	7:126085913-126088095..7:126358358-126363704	GM12878	blood:
28	chr7:126442832..126443335-chr7:127154316..127155202,2	MCF-7	breast:
29	7:126441098-126445427..7:126733290-126737485	H1-hESC	embryonic stem cell:	embryo
30	chr7:126338487..126341370-chr7:126368124..126371050,2	K562	blood:
31	chr7:126427196..126429754-chr7:126431712..126435448,3	K562	blood:
32	chr7:126229350..126232044-chr7:126242198..126244525,2	K562	blood:
33	chr7:126363919..126365530-chr7:126368922..126370814,2	K562	blood:
34	7:126264015-126265203..7:126890676-126899918	H1-hESC	embryonic stem cell:	embryo
35	7:126177569-126189146..7:127233104-127239235	K562	blood:
36	chr7:126287875..126289715-chr7:126294505..126296060,2	K562	blood:
37	chr7:126307967..126309880-chr7:126404666..126406467,2	K562	blood:
38	chr7:126136384..126139302-chr7:126250186..126252685,2	K562	blood:
39	chr7:126310480..126313047-chr7:126341094..126342688,2	K562	blood:
40	chr7:126309021..126312996-chr7:126337447..126339848,3	K562	blood:
41	chr7:126492682..126494185-chr7:126494985..126497035,2	K562	blood:
42	chr7:126340457..126344219-chr7:126344404..126348305,6	K562	blood:
43	chr7:126229350..126232044-chr7:126242198..126244525,2	K562	blood:
44	7:126177569-126189146..7:127225864-127233104	GM12878	blood:
45	7:126085913-126088095..7:126563918-126569249	K562	blood:
46	7:126312146-126318123..7:127233104-127239235	H1-hESC	embryonic stem cell:	embryo
47	chr7:126368803..126371577-chr7:126373352..126375062,2	K562	blood:
48	chr7:126496786..126498746-chr7:126500529..126502173,2	MCF-7	breast:
49	chr7:126359674..126361280-chr7:126368196..126369937,2	K562	blood:
50	7:126085913-126088095..7:126352172-126357573	GM12878	blood:

(count:2 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ARF5-17	chr7:126151189-126152933	NONHSAT123118
2	lnc-ZNF800-7	chr7:126508821-126510586	NONHSAT123122

No data

Variant related genes	Relation type
GRM8	TF binding region
ENSG00000227249	TF binding region
ENSG00000224981	TF binding region
GRM8	CpG island
ENSG00000227249	CpG island
ENSG00000224981	CpG island
ENSG00000179603	chromatin interactions
ENSG00000272426	chromatin interactions
ENSG00000227249	chromatin interactions
ENSG00000106328	chromatin interactions
ENSG00000048405	chromatin interactions
ENSG00000004059	chromatin interactions
ENSG00000179562	chromatin interactions

Extended variants
information (count: 11448 )
Associated
traits (count: 102 )

Variant overlapped rSNPs/rCNVs (count:11448 , 50 per page) page: 1 2 3 4 5 6 7 ... 229

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs142272012	chr7:126070810-126070811	Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs546816898	chr7:126070913-126070914	Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs188290049	chr7:126070920-126070921	Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs536361677	chr7:126070992-126070993	Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs554238753	chr7:126071033-126071034	Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs569636959	chr7:126071040-126071041	Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs377689085	chr7:126071074-126071075	Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs570058313	chr7:126071107-126071108	Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs9918691	chr7:126071111-126071112	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
10	rs146402691	chr7:126071112-126071113	Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs192981524	chr7:126071151-126071152	Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs555946841	chr7:126071152-126071153	Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs563704691	chr7:126071202-126071203	Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs556611881	chr7:126071204-126071205	Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs139750396	chr7:126071207-126071208	Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs144444433	chr7:126071256-126071257	Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs374171705	chr7:126071273-126071274	Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs9918568	chr7:126071308-126071309	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
19	rs535244673	chr7:126071310-126071311	Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs10487447	chr7:126071383-126071384	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
21	rs10276326	chr7:126071398-126071399	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
22	rs528792817	chr7:126071419-126071420	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs9918707	chr7:126071466-126071467	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
24	rs77953688	chr7:126071467-126071468	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs529709597	chr7:126071470-126071471	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs548276822	chr7:126071486-126071487	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs182839138	chr7:126071511-126071512	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs544124514	chr7:126071550-126071551	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs578041966	chr7:126071559-126071560	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs10487448	chr7:126071605-126071606	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
31	rs34164328	chr7:126071650-126071651	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs13242235	chr7:126071651-126071652	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs146606276	chr7:126071685-126071686	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs552843638	chr7:126071696-126071697	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs574581764	chr7:126071718-126071719	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs147678885	chr7:126071743-126071744	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs150911914	chr7:126071758-126071759	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs67025633	chr7:126071759-126071760	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs71177551	chr7:126071761-126071762	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs200516424	chr7:126071762-126071763	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs187965381	chr7:126071764-126071765	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs191105208	chr7:126071791-126071792	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs13310618	chr7:126071844-126071845	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
44	rs184747792	chr7:126071857-126071858	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs564157518	chr7:126071860-126071861	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs573173829	chr7:126071864-126071865	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs540528272	chr7:126071882-126071883	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs189475644	chr7:126071979-126071980	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs139517917	chr7:126072008-126072009	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs10487449	chr7:126072066-126072067	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a

Variant related diseases (count:102)

Disease	PMID	Source
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Thyroid cancer	19087340	CNVD
Seminomas	18059402	CNVD
Testicular cancer	18059402	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Autism	19415332	CNVD
Medulloblastoma	21979893	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
T-cell lymphomas	19863542	CNVD
Malaria	21533027	CNVD
Melanoma	18172304	CNVD
Renal cell carcinoma	19461508	CNVD
head and neck squamous cell carcinoma	19289630	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	22495311	CNVD
Wilms tumour	21544195	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Squamous cell cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Glioblastoma multiforme	17387387	CNVD
Low-grade fibromyxoid sarcoma	0	CNVD
Oligodendroglial tumors	17285580	CNVD
Endometrial cancer	22040021	CNVD
Burkitt''s lymphoma	18698080	CNVD
Breast cancer	21264507	CNVD
Shwachman-Diamond syndrome	22934832	CNVD
Colorectal cancer	19359472	CNVD
Cutaneous malignant melanoma	17690212	CNVD
Leukemia	17361228	CNVD
Breast cancer	16461572	CNVD
Peripheral t-cell lymphoma	19118030	CNVD
Malignant melanoma	17690212	CNVD
Renal cell carcinoma	18592004	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Multiple myeloma	17550852	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Neurodevelopmental disorder	22521361	CNVD
abortions and stillbirths	19751515	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Acute myeloid leukemia	20729466	CNVD
Lung cancer	18438408	CNVD
Metanephric adenoma	20802469	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Burkitt''s lymphoma	19759907	CNVD
Chronic myeloid leukemia	21384125	CNVD
Breast cancer	21858162	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
lymphocytic leukemia	21291569	CNVD
Acute myeloid leukemia	21251322	CNVD
Prostate cancer	16573809	CNVD
Medulloblastoma	16783165	CNVD
Biliary cancer	19435499	CNVD
Non-small cell lung cancer	21829676	CNVD
Ovarian neoplasms	16753589	CNVD
Prostate cancer	23792589	CNVD
Adenocarcinoma	21044232	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Non-small cell lung cancer	19889201	CNVD
Acute myeloid leukemia	18000384	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Metastatic melanoma	18483359	CNVD
Autism	18414403	CNVD
Autism	19401682	CNVD
Autism	19546859	CNVD
Schizophrenia	19546859	CNVD
Tourette syndrome	19546859	CNVD
Melanoma	19188590	CNVD
Hepatocellular carcinoma	16785998	CNVD
Glioblastoma multiforme	18628472	CNVD
Basal cell lymphoma	21115979	CNVD
Breast cancer	21509527	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
small cell lung cancer	20016488	CNVD
Epilepsy	21635232	CNVD
Squamous cell cancer	20885788	CNVD
Myelofibrosis	22110671	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
abnormal development	18461090	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Autism	20808228	CNVD
Autism	19246517	CNVD
Pancreatic cancer	17952125	CNVD
Cancer	20164919	CNVD
Lung cancer	20668451	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Breast cancer	22522925	CNVD
Prostate cancer	22341455	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Schizophrenia	23813976	CNVD
Attention deficit hyperactivity disorder	22138692	CNVD
early-passage human iPS cells	21368824	CNVD

Chromatin state (count:682 , 50 per page) page: 1 2 3 4 5 6 7 ... 14

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:126070800-126071200	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr7:126070800-126071400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr7:126070800-126071600	Enhancers	Breast Myoepithelial Primary Cells	Breast
4	chr7:126071400-126076200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
5	chr7:126076200-126076400	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
6	chr7:126076200-126076400	Enhancers	Fetal Heart	heart
7	chr7:126076400-126076600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
8	chr7:126076400-126076800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
9	chr7:126076400-126076800	Flanking Active TSS	Fetal Heart	heart
10	chr7:126076400-126077200	Enhancers	Fetal Intestine Large	intestine
11	chr7:126076600-126076800	Flanking Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
12	chr7:126076600-126077200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
13	chr7:126076800-126077000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
14	chr7:126076800-126077400	Enhancers	Fetal Heart	heart
15	chr7:126076800-126081800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
16	chr7:126077000-126082000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
17	chr7:126077200-126080200	Weak transcription	Fetal Intestine Large	intestine
18	chr7:126077400-126077800	Weak transcription	Fetal Heart	heart
19	chr7:126077400-126078200	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
20	chr7:126077800-126078000	Enhancers	Fetal Heart	heart
21	chr7:126078000-126081800	Weak transcription	Fetal Heart	heart
22	chr7:126080200-126081000	Enhancers	Fetal Intestine Large	intestine
23	chr7:126081000-126082000	Weak transcription	Fetal Intestine Large	intestine
24	chr7:126081400-126082400	Enhancers	Rectal Mucosa Donor 31	rectum
25	chr7:126081800-126082200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
26	chr7:126081800-126082200	Enhancers	Fetal Heart	heart
27	chr7:126082000-126082200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
28	chr7:126082000-126082400	Enhancers	Fetal Intestine Large	intestine
29	chr7:126082400-126087600	Weak transcription	Fetal Intestine Large	intestine
30	chr7:126082400-126090200	Weak transcription	Rectal Mucosa Donor 31	rectum
31	chr7:126085800-126086800	ZNF genes & repeats	GM12878-XiMat	blood
32	chr7:126086400-126086600	Enhancers	HSMMtube	muscle
33	chr7:126086600-126087600	Weak transcription	HSMMtube	muscle
34	chr7:126086800-126087800	Flanking Active TSS	GM12878-XiMat	blood
35	chr7:126087600-126087800	Enhancers	HSMMtube	muscle
36	chr7:126087600-126088000	Enhancers	Fetal Intestine Large	intestine
37	chr7:126087800-126088200	Enhancers	Fetal Lung	lung
38	chr7:126087800-126088200	Enhancers	Placenta Amnion	Placenta Amnion
39	chr7:126087800-126088200	Enhancers	GM12878-XiMat	blood
40	chr7:126087800-126088600	Weak transcription	HSMMtube	muscle
41	chr7:126088000-126089800	Weak transcription	Fetal Intestine Large	intestine
42	chr7:126088200-126089200	Weak transcription	Fetal Lung	lung
43	chr7:126088200-126089800	Weak transcription	GM12878-XiMat	blood
44	chr7:126088600-126091000	Enhancers	HSMMtube	muscle
45	chr7:126089200-126089400	Enhancers	Fetal Heart	heart
46	chr7:126089200-126091000	Enhancers	Fetal Lung	lung
47	chr7:126089400-126089600	Flanking Active TSS	Fetal Heart	heart
48	chr7:126089600-126090000	Enhancers	Fetal Heart	heart
49	chr7:126089800-126090600	Enhancers	Fetal Intestine Large	intestine
50	chr7:126089800-126090600	Enhancers	NH-A	brain

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links