Variant report

Variant nsv539349
Chromosome Location chr8:3015881-3159246
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:301 , 50 per page) page: 1 2 3 4 5 6 7
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:2999800-3016400 Weak transcription Brain Cingulate Gyrus brain
2 chr8:3014400-3016800 Weak transcription Cortex derived primary cultured neurospheres brain
3 chr8:3014800-3020000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
4 chr8:3015200-3016000 Enhancers H9 Cell Line embryonic stem cell
5 chr8:3015200-3016600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr8:3015200-3037600 Weak transcription K562 blood
7 chr8:3015800-3016000 Enhancers iPS-20b Cell Line embryonic stem cell
8 chr8:3015800-3016800 Enhancers Brain Germinal Matrix brain
9 chr8:3015800-3017400 Enhancers ES-I3 Cell Line embryonic stem cell
10 chr8:3015800-3017400 Enhancers HUES64 Cell Line embryonic stem cell
11 chr8:3015800-3017400 Enhancers iPS-18 Cell Line embryonic stem cell
12 chr8:3016000-3017000 Weak transcription iPS-20b Cell Line embryonic stem cell
13 chr8:3016000-3017200 Enhancers HUES48 Cell Line embryonic stem cell
14 chr8:3016000-3017600 Enhancers iPS-15b Cell Line embryonic stem cell
15 chr8:3016600-3026600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr8:3016800-3017200 Weak transcription Brain Germinal Matrix brain
17 chr8:3016800-3017600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
18 chr8:3016800-3018200 Enhancers Cortex derived primary cultured neurospheres brain
19 chr8:3017000-3017400 Enhancers iPS-20b Cell Line embryonic stem cell
20 chr8:3017000-3017600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
21 chr8:3017000-3018000 Enhancers H1 Cell Line embryonic stem cell
22 chr8:3017200-3018400 Enhancers Brain Germinal Matrix brain
23 chr8:3017400-3018000 Enhancers Brain Hippocampus Middle brain
24 chr8:3017600-3021200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
25 chr8:3018000-3020600 Weak transcription Brain Hippocampus Middle brain
26 chr8:3020600-3021600 Enhancers Fetal Adrenal Gland Adrenal Gland
27 chr8:3020800-3021200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
28 chr8:3021000-3021200 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
29 chr8:3021200-3021400 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr8:3021200-3021400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
31 chr8:3021200-3021600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
32 chr8:3021200-3032000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
33 chr8:3021400-3021800 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr8:3026600-3026800 Enhancers iPS-18 Cell Line embryonic stem cell
35 chr8:3026600-3027200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr8:3026600-3027600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
37 chr8:3026600-3027600 Enhancers Cortex derived primary cultured neurospheres brain
38 chr8:3027000-3027400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
39 chr8:3027000-3027600 Enhancers H9 Cell Line embryonic stem cell
40 chr8:3027000-3027600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr8:3027400-3027600 Enhancers iPS-18 Cell Line embryonic stem cell
42 chr8:3027600-3028800 Weak transcription H9 Cell Line embryonic stem cell
43 chr8:3028400-3029000 Enhancers Fetal Adrenal Gland Adrenal Gland
44 chr8:3028800-3029000 Enhancers H9 Cell Line embryonic stem cell
45 chr8:3034400-3034800 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr8:3037600-3038000 Strong transcription K562 blood
47 chr8:3038000-3038600 Weak transcription K562 blood
48 chr8:3038600-3038800 Genic enhancers K562 blood
49 chr8:3038600-3039400 Enhancers Placenta Amnion Placenta Amnion
50 chr8:3038800-3039400 Flanking Active TSS K562 blood

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