Variant report
Variant | nsv539384 |
---|---|
Chromosome Location | chr8:4233377-4261315 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:109)
- CpG islands (count:61)
- Chromatin interactive region (count:2)
- LncRNA region (count:1)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | CEBPB | chr8:4250895-4251106 | HepG2 | liver: | n/a | chr8:4250917-4250928 |
2 | CEBPB | chr8:4242430-4242568 | A549 | lung: | n/a | n/a |
3 | CTCF | chr8:4257420-4257570 | Caco-2 | colon: | n/a | chr8:4257523-4257544 chr8:4257533-4257541 |
4 | CTCF | chr8:4257440-4257590 | Caco-2 | colon: | n/a | chr8:4257523-4257544 chr8:4257533-4257541 |
5 | CTCF | chr8:4257464-4257602 | HepG2 | liver: | n/a | chr8:4257523-4257544 chr8:4257533-4257541 |
6 | CTCF | chr8:4257440-4257590 | HEK293 | kidney: | n/a | chr8:4257523-4257544 chr8:4257533-4257541 |
7 | CTCF | chr8:4257280-4257430 | A549 | lung: | n/a | n/a |
8 | CTCF | chr8:4244652-4244790 | Pancreas_OC | pancreas: | n/a | chr8:4244685-4244706 chr8:4244691-4244707 chr8:4244690-4244708 |
9 | CTCF | chr8:4257441-4257652 | Pancreas_OC | pancreas: | n/a | chr8:4257523-4257544 chr8:4257533-4257541 |
10 | CTCF | chr8:4257485-4257570 | MCF-7 | breast: | n/a | chr8:4257523-4257544 chr8:4257533-4257541 |
11 | CTCF | chr8:4257440-4257590 | HMEC | breast: | n/a | chr8:4257523-4257544 chr8:4257533-4257541 |
12 | CTCF | chr8:4257444-4257629 | LNCaP | prostate: | n/a | chr8:4257523-4257544 chr8:4257533-4257541 |
13 | CTCF | chr8:4257426-4257627 | T-47D | breast: | n/a | chr8:4257523-4257544 chr8:4257533-4257541 |
14 | CTCF | chr8:4257440-4257590 | HAc | cerebellar: | n/a | chr8:4257523-4257544 chr8:4257533-4257541 |
15 | CTCF | chr8:4257454-4257612 | MCF-7 | breast: | n/a | chr8:4257523-4257544 chr8:4257533-4257541 |
16 | CTCF | chr8:4257467-4257635 | Lung_OC | lung: | n/a | chr8:4257523-4257544 chr8:4257533-4257541 |
17 | CTCF | chr8:4257399-4257609 | HepG2 | liver: | n/a | chr8:4257523-4257544 chr8:4257533-4257541 |
18 | CTCF | chr8:4257423-4257594 | H1-hESC | embryonic stem cell: | n/a | chr8:4257523-4257544 chr8:4257533-4257541 |
19 | CTCF | chr8:4257460-4257610 | HepG2 | liver: | n/a | chr8:4257523-4257544 chr8:4257533-4257541 |
20 | CTCF | chr8:4257480-4257630 | WERI-Rb-1 | eye: | n/a | chr8:4257523-4257544 chr8:4257533-4257541 |
21 | CTCF | chr8:4257440-4257590 | HRE | kidney: | n/a | chr8:4257523-4257544 chr8:4257533-4257541 |
22 | CTCF | chr8:4253927-4253975 | GM20000 | blood: | n/a | n/a |
23 | CTCF | chr8:4257480-4257630 | RPTEC | kidney: | n/a | chr8:4257523-4257544 chr8:4257533-4257541 |
24 | CTCF | chr8:4257472-4257613 | Medullo | brain: | n/a | chr8:4257523-4257544 chr8:4257533-4257541 |
25 | CTCF | chr8:4257440-4257590 | WERI-Rb-1 | eye: | n/a | chr8:4257523-4257544 chr8:4257533-4257541 |
26 | CTCF | chr8:4257480-4257630 | HL-60 | blood: | n/a | chr8:4257523-4257544 chr8:4257533-4257541 |
27 | CTCF | chr8:4257300-4257450 | NHEK | skin: | n/a | n/a |
28 | CTCF | chr8:4257460-4257610 | HRE | kidney: | n/a | chr8:4257523-4257544 chr8:4257533-4257541 |
29 | CTCF | chr8:4257460-4257610 | A549 | lung: | n/a | chr8:4257523-4257544 chr8:4257533-4257541 |
30 | CTCF | chr8:4257440-4257590 | NHEK | skin: | n/a | chr8:4257523-4257544 chr8:4257533-4257541 |
31 | CTCF | chr8:4257388-4257676 | HepG2 | liver: | n/a | chr8:4257523-4257544 chr8:4257533-4257541 |
32 | CTCF | chr8:4257420-4257570 | MCF-7 | breast: | n/a | chr8:4257523-4257544 chr8:4257533-4257541 |
33 | CTCF | chr8:4257477-4257618 | Kidney_OC | kidney: | n/a | chr8:4257523-4257544 chr8:4257533-4257541 |
34 | CTCF | chr8:4257440-4257590 | MCF-7 | breast: | n/a | chr8:4257523-4257544 chr8:4257533-4257541 |
35 | CTCF | chr8:4257480-4257630 | SAEC | small airway: | n/a | chr8:4257523-4257544 chr8:4257533-4257541 |
36 | CTCF | chr8:4257420-4257570 | SK-N-SH_RA | brain: | n/a | chr8:4257523-4257544 chr8:4257533-4257541 |
37 | CTCF | chr8:4257479-4257619 | Hela-S3 | cervix: | n/a | chr8:4257523-4257544 chr8:4257533-4257541 |
38 | CTCF | chr8:4257560-4257710 | HepG2 | liver: | n/a | n/a |
39 | CTCF | chr8:4257475-4257607 | LNCaP | prostate: | n/a | chr8:4257523-4257544 chr8:4257533-4257541 |
40 | CTCF | chr8:4257493-4257566 | Gliobla | brain: | n/a | chr8:4257523-4257544 chr8:4257533-4257541 |
41 | CTCF | chr8:4257440-4257590 | RPTEC | kidney: | n/a | chr8:4257523-4257544 chr8:4257533-4257541 |
42 | E2F6 | chr8:4238700-4238954 | H1-hESC | embryonic stem cell: | n/a | chr8:4238782-4238793 chr8:4238779-4238796 chr8:4238779-4238796 |
43 | E2F6 | chr8:4238516-4239067 | H1-hESC | embryonic stem cell: | n/a | chr8:4238782-4238793 chr8:4238779-4238796 chr8:4238779-4238796 |
44 | FOXA1 | chr8:4254901-4255129 | HepG2 | liver: | n/a | n/a |
45 | FOXA2 | chr8:4260221-4260452 | A549 | lung: | n/a | n/a |
46 | JUND | chr8:4238746-4238897 | H1-hESC | embryonic stem cell: | n/a | n/a |
47 | JUND | chr8:4261102-4261421 | HepG2 | liver: | n/a | n/a |
48 | MAFF | chr8:4236818-4237053 | K562 | blood: | n/a | chr8:4236963-4236981 |
49 | MAFF | chr8:4253104-4253440 | HepG2 | liver: | n/a | chr8:4253262-4253280 chr8:4253261-4253275 |
50 | MAFF | chr8:4258533-4258595 | HepG2 | liver: | n/a | chr8:4258552-4258570 |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr8:4238976-4239026 | AG04449 | skin: | fetal |
2 | chr8:4238976-4239026 | RPTEC | kidney: | n/a |
3 | chr8:4238976-4239026 | HCPEpiC | choroid plexus: | n/a |
4 | chr8:4238976-4239026 | IMR90 | lung: | fetal |
5 | chr8:4238976-4239026 | HRE | kidney: | n/a |
6 | chr8:4238976-4239026 | PANC-1 | pancreas: | n/a |
7 | chr8:4238976-4239026 | BJ | skin: | n/a |
8 | chr8:4238976-4239026 | Caco-2 | colon: | n/a |
9 | chr8:4238976-4239026 | SAEC | small airway: | n/a |
10 | chr8:4238976-4239026 | U87 | brain: | n/a |
11 | chr8:4238976-4239026 | SK-N-SH_RA | brain: | n/a |
12 | chr8:4238976-4239026 | MCF-7 | breast: | n/a |
13 | chr8:4238976-4239026 | NT2-D1 | testis: | n/a |
14 | chr8:4238976-4239026 | HCT-116 | colon: | n/a |
15 | chr8:4238976-4239026 | HCF | heart: | n/a |
16 | chr8:4238976-4239026 | GM19239 | blood: | n/a |
17 | chr8:4238976-4239026 | BE2_C | brain: | n/a |
18 | chr8:4238976-4239026 | ovcar-3 | ovarian: | n/a |
19 | chr8:4238976-4239026 | H1-hESC | embryonic stem cell: | embryo |
20 | chr8:4238976-4239026 | K562 | blood: | n/a |
21 | chr8:4238976-4239026 | A549 | lung: | n/a |
22 | chr8:4238976-4239026 | HNPCEpiC | eye: | n/a |
23 | chr8:4238976-4239026 | HMEC | breast: | n/a |
24 | chr8:4238976-4239026 | SKMC | muscle: | n/a |
25 | chr8:4238976-4239026 | HepG2 | liver: | n/a |
26 | chr8:4238976-4239026 | HRCEpiC | kidney: | n/a |
27 | chr8:4238976-4239026 | AG09309 | skin: | n/a |
28 | chr8:4238976-4239026 | HUVEC | blood vessel: | n/a |
29 | chr8:4238976-4239026 | Hepatocyte | liver: | n/a |
30 | chr8:4238976-4239026 | AG04450 | lung: | fetal |
31 | chr8:4238976-4239026 | HCM | heart: | n/a |
32 | chr8:4238976-4239026 | HEK293 | kidney: | embryo |
33 | chr8:4238976-4239026 | HL-60 | blood: | n/a |
34 | chr8:4238976-4239026 | HIPEpiC | eye: | n/a |
35 | chr8:4238976-4239026 | GM12891 | blood: | n/a |
36 | chr8:4238976-4239026 | GM12892 | blood: | n/a |
37 | chr8:4238976-4239026 | ProgFib | skin: | n/a |
38 | chr8:4238976-4239026 | MCF10A-Er-Src | breast: | n/a |
39 | chr8:4238976-4239026 | NHDF-neo | bronchial: | n/a |
40 | chr8:4238976-4239026 | ECC-1 | luminal epithelium: | n/a |
41 | chr8:4238976-4239026 | Jurkat | blood: | n/a |
42 | chr8:4238976-4239026 | GM06990 | blood: | n/a |
43 | chr8:4238976-4239026 | AoSMC | blood vessel: | n/a |
44 | chr8:4238976-4239026 | PrEC | prostate: | n/a |
45 | chr8:4238976-4239026 | HEEpiC | esophagus: | n/a |
46 | chr8:4238976-4239026 | T-47D | breast: | n/a |
47 | chr8:4238976-4239026 | AG10803 | skin: | n/a |
48 | chr8:4238976-4239026 | HPAEpiC | pulmonary alveolar: | n/a |
49 | chr8:4238976-4239026 | GM12878 | blood: | n/a |
50 | chr8:4238976-4239026 | PFSK-1 | brain: | n/a |
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No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-MCPH1-8 | chr8:4250344-4250612 | NONHSAT124750 |
No data |
No data |
Variant related genes | Relation type |
---|---|
RN7SL872P | TF binding region |
RN7SL872P | CpG island |
ENSG00000183117 | chromatin interactions |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs571326906 | chr8:4233391-4233392 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
2 | rs535984096 | chr8:4233405-4233406 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
3 | rs557637053 | chr8:4233411-4233412 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
4 | rs111489615 | chr8:4233420-4233421 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
5 | rs537351059 | chr8:4233427-4233428 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
6 | rs555315086 | chr8:4233440-4233441 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
7 | rs186857563 | chr8:4233465-4233466 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
8 | rs541157839 | chr8:4233485-4233486 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
9 | rs138998261 | chr8:4233525-4233526 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
10 | rs142268341 | chr8:4233533-4233534 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
11 | rs544982229 | chr8:4233543-4233544 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
12 | rs553241759 | chr8:4233547-4233548 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
13 | rs377613897 | chr8:4233555-4233556 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
14 | rs564013950 | chr8:4233558-4233559 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
15 | rs146288982 | chr8:4233559-4233560 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
16 | rs556187569 | chr8:4233571-4233572 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
17 | rs113658785 | chr8:4233583-4233584 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
18 | rs565484198 | chr8:4233585-4233586 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
19 | rs373584286 | chr8:4233598-4233599 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
20 | rs572604026 | chr8:4233610-4233611 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
21 | rs528630675 | chr8:4233621-4233622 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
22 | rs546702860 | chr8:4233631-4233632 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
23 | rs13251340 | chr8:4233644-4233645 | Enhancers | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
24 | rs538648337 | chr8:4233647-4233648 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
25 | rs139527017 | chr8:4233648-4233649 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
26 | rs569228005 | chr8:4233666-4233667 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
27 | rs79993329 | chr8:4233667-4233668 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
28 | rs191258506 | chr8:4233669-4233670 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
29 | rs13277882 | chr8:4233670-4233671 | Enhancers | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
30 | rs558621527 | chr8:4233687-4233688 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
31 | rs571996254 | chr8:4233697-4233698 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
32 | rs183417099 | chr8:4233707-4233708 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
33 | rs369775623 | chr8:4233717-4233718 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
34 | rs187901675 | chr8:4233741-4233742 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
35 | rs149585913 | chr8:4233742-4233743 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
36 | rs371596401 | chr8:4233755-4233756 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
37 | rs367850941 | chr8:4233761-4233762 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
38 | rs56246320 | chr8:4233767-4233768 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
39 | rs563170148 | chr8:4233777-4233778 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
40 | rs568344861 | chr8:4233789-4233790 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
41 | rs190041989 | chr8:4233791-4233792 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
42 | rs76392881 | chr8:4233798-4233799 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
43 | rs550495764 | chr8:4235810-4235811 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
44 | rs546666280 | chr8:4235811-4235812 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
45 | rs79229105 | chr8:4235816-4235817 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
46 | rs532502146 | chr8:4235819-4235820 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
47 | rs551396696 | chr8:4235825-4235826 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
48 | rs188751684 | chr8:4235867-4235868 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
49 | rs536943578 | chr8:4235896-4235897 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
50 | rs17414118 | chr8:4235897-4235898 | Weak transcription | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
Disease | PMID | Source |
---|---|---|
Basal cell lymphoma | 16317097 | CNVD |
Diffuse large b-cell lymphoma | 16317097 | CNVD |
Prostate cancer | 16573809 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Ovarian clear cell carcinoma | 21343371 | CNVD |
abnormal development | 18461090 | CNVD |
Crohn''s disease | 19220326 | CNVD |
Psoriasis | 19220326 | CNVD |
Prostate cancer | 21965145 | CNVD |
Prostate cancer | 18515986 | CNVD |
Chronic obstructive pulmonary disease | 20378733 | CNVD |
Autism | 18414403 | CNVD |
Cancer | 21183584 | CNVD |
Non-syndromic sensorineural hearing loss | 15273396 | CNVD |
Breast cancer | 17603634 | CNVD |
Myeloproliferative neoplasm | 20015882 | CNVD |
Ovarian cancer | 20844748 | CNVD |
Cervical cancer | 17311676 | CNVD |
High-grade prostatic intraepithelial neoplasia | 16573809 | CNVD |
Non-syndromic sensorineural hearing loss | 20606397 | CNVD |
Schizophrenia | 20877625 | CNVD |
Disorders of sex development | 21048976 | CNVD |
Colorectal cancer | 16272173 | CNVD |
Basal cell lymphoma | 17170743 | CNVD |
Follicular lymphoma | 17170743 | CNVD |
Breast cancer | 17001317 | CNVD |
Thyroid cancer | 19087340 | CNVD |
Multiple myeloma | 16616336 | CNVD |
Hepatocellular carcinoma | 22174799 | CNVD |
Heart disease | 21282601 | CNVD |
T-cell lymphomas | 19863542 | CNVD |
Ovarian cancer | 22174824 | CNVD |
Colorectal cancer | 21297112 | CNVD |
Hodgkin''s lymphoma | 18641027 | CNVD |
Salivary gland tumor | 18059337 | CNVD |
Breast cancer | 17133270 | CNVD |
Melanoma | 18172304 | CNVD |
Medulloblastoma | 21979893 | CNVD |
Chronic lymphocytic leukemia | 18922857 | CNVD |
Breast cancer | 17393978 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Cancer | 21637783 | CNVD |
Breast cancer | 20837533 | CNVD |
Squamous cell cancer | 21044232 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
Cancer | 22429812 | CNVD |
Non-small cell lung cancer | 21044232 | CNVD |
Non-syndromic sensorineural hearing loss | 18471307 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Colorectal cancer | 20709793 | CNVD |
Ewing''s sarcoma | 21437220 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Basal cell lymphoma | 21115979 | CNVD |
Breast cancer | 21264507 | CNVD |
Carcinoma ex pleomorphic adenoma | 18828159 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Glioblastoma multiforme | 19960244 | CNVD |
Oral cancer | 21386901 | CNVD |
Prostate cancer | 21088497 | CNVD |
Breast cancer | 20940404 | CNVD |
Colorectal cancer | 19359472 | CNVD |
Embryonal rhabdomyosarcoma | 16790082 | CNVD |
Gastric cancer | 17167181 | CNVD |
Prostate cancer | 16705090 | CNVD |
8p-syndrome | 17576883 | CNVD |
Human rectal carcinomas | 16397240 | CNVD |
Medulloblastoma | 16968546 | CNVD |
Lung adenocarcinoma | 19525976 | CNVD |
Lung cancer | 19525976 | CNVD |
Prostate cancer | 17245344 | CNVD |
Gastrointestinal stromal cancer | 16982739 | CNVD |
Cancer | 16751803 | CNVD |
Wilms tumour | 21544195 | CNVD |
Gastric cancer | 17908304 | CNVD |
Autism | 19415332 | CNVD |
Malaria | 21533027 | CNVD |
Non-syndromic sensorineural hearing loss | 22037309 | CNVD |
Esophageal cancer | 21851588 | CNVD |
Acute promyelocytic leukemia | 19109227 | CNVD |
Breast cancer | 21245420 | CNVD |
Acute lymphoblastic leukemia | 21248843 | CNVD |
Breast cancer | 21785460 | CNVD |
Thoracic aortic aneurysm | 21092924 | CNVD |
Acute myeloid leukemia | 20729466 | CNVD |
Ductal carcinoma | 22052326 | CNVD |
Breast cancer | 21509527 | CNVD |
T-cell prolymphocytic leukemia | 17713554 | CNVD |
Acute lymphoblastic leukemia | 22237106 | CNVD |
Epilepsy | 22083797 | CNVD |
Acute myeloid leukemia | 21251322 | CNVD |
low-grade B-cell lymphoma tumor | 18367492 | CNVD |
Prostate cancer | 18632612 | CNVD |
Breast cancer | 21858162 | CNVD |
lymphocytic leukemia | 21291569 | CNVD |
Liver carcinoma | 19366792 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
Autism | 22495311 | CNVD |
Congenital diaphragmatic hernia | 21064195 | CNVD |
Breast cancer | 21364760 | CNVD |
Cancer | 20164920 | CNVD |
Oral squamous cell carcinoma | 17134496 | CNVD |
Non-small cell lung cancer | 21829676 | CNVD |
Esophageal squamous carcinoma | 18405350 | CNVD |
Prostate cancer | 17217626 | CNVD |
Developmental delay | 19128483 | CNVD |
Neuroticism | 17667963 | CNVD |
Leukoplakia | 24403051 | CNVD |
Intellectual disability | 22045946 | CNVD |
Malignant fibrous histiocytomas | 21085701 | CNVD |
Breast cancer | 16608533 | CNVD |
Seminomas | 18059402 | CNVD |
Urothelial carcinoma | 21177765 | CNVD |
Lung cancer | 18438408 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Colorectal cancer | 16774939 | CNVD |
Colorectal cancer | 21645411 | CNVD |
Colorectal cancer | 22014273 | CNVD |
Lung squamous cell carcinoma | 22363434 | CNVD |
Cancer | 20164919 | CNVD |
Non-syndromic sensorineural hearing loss | 17289997 | CNVD |
Non-syndromic sensorineural hearing loss | 17122850 | CNVD |
Chronic myeloid leukemia | 21384125 | CNVD |
Tetralogy of Fallot | 22912587 | CNVD |
Schizophrenia | 21346763 | CNVD |
Pancreatic ductal adenocarcinoma | 19077451 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr8:4233000-4233800 | Enhancers | Cortex derived primary cultured neurospheres | brain |
2 | chr8:4235800-4236000 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
3 | chr8:4236000-4236200 | Enhancers | ES-UCSF4 Cell Line | embryonic stem cell |
4 | chr8:4236200-4238800 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
5 | chr8:4238800-4239200 | Enhancers | ES-I3 Cell Line | embryonic stem cell |
6 | chr8:4238800-4239200 | Enhancers | iPS-15b Cell Line | embryonic stem cell |
7 | chr8:4238800-4239400 | Enhancers | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
8 | chr8:4238800-4239400 | Enhancers | H9 Derived Neuron Cultured Cells | ES cell derived |
9 | chr8:4238800-4239400 | Enhancers | ES-UCSF4 Cell Line | embryonic stem cell |
10 | chr8:4239000-4239200 | Enhancers | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
11 | chr8:4239000-4240000 | Enhancers | H1 Cell Line | embryonic stem cell |
12 | chr8:4240400-4240600 | Enhancers | Psoas Muscle | Psoas |
13 | chr8:4252000-4253000 | Enhancers | Dnd41 | blood |
14 | chr8:4252200-4252600 | Enhancers | Thymus | Thymus |
15 | chr8:4252400-4252600 | Enhancers | Pancreas | Pancrea |
16 | chr8:4257400-4258000 | Enhancers | Fetal Brain Female | brain |
17 | chr8:4257600-4260400 | Enhancers | Cortex derived primary cultured neurospheres | brain |
18 | chr8:4257800-4258200 | Enhancers | Fetal Brain Male | brain |
19 | chr8:4258000-4260000 | Weak transcription | Fetal Brain Female | brain |
20 | chr8:4258200-4265000 | Weak transcription | Fetal Brain Male | brain |
21 | chr8:4259600-4259800 | Enhancers | Fetal Heart | heart |
22 | chr8:4259800-4260200 | Enhancers | Brain Germinal Matrix | brain |
23 | chr8:4259800-4260400 | Enhancers | Ganglion Eminence derived primary cultured neurospheres | brain |
24 | chr8:4260000-4260200 | Enhancers | Fetal Brain Female | brain |
25 | chr8:4260200-4263200 | Weak transcription | Brain Germinal Matrix | brain |
26 | chr8:4260400-4263200 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
27 | chr8:4260400-4264200 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |