Variant report

Variant nsv539618
Chromosome Location chr8:53488049-53748168
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:4026 , 50 per page) page: 1 2 3 4 5 6 7 ... 81
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:53487800-53490800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
2 chr8:53488600-53489400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
3 chr8:53489400-53490800 Enhancers Skeletal Muscle Female skeletal muscle
4 chr8:53490200-53490800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr8:53490400-53490800 Enhancers HMEC breast
6 chr8:53490400-53491000 Enhancers Liver Liver
7 chr8:53490600-53490800 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
8 chr8:53490600-53490800 Flanking Active TSS A549 lung
9 chr8:53490600-53490800 Flanking Active TSS NHLF lung
10 chr8:53490600-53491000 Enhancers Breast Myoepithelial Primary Cells Breast
11 chr8:53490800-53492000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
12 chr8:53492200-53492400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
13 chr8:53498600-53499000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
14 chr8:53498800-53499600 Active TSS Stomach Smooth Muscle stomach
15 chr8:53499000-53502200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
16 chr8:53499600-53499800 Weak transcription Stomach Smooth Muscle stomach
17 chr8:53499600-53500000 Bivalent Enhancer Fetal Stomach stomach
18 chr8:53499600-53500200 Enhancers Colon Smooth Muscle Colon
19 chr8:53499600-53500200 Enhancers Rectal Smooth Muscle rectum
20 chr8:53499800-53500200 Enhancers Stomach Smooth Muscle stomach
21 chr8:53502000-53502200 Enhancers H1 Cell Line embryonic stem cell
22 chr8:53502000-53502200 Enhancers iPS-18 Cell Line embryonic stem cell
23 chr8:53502000-53503600 Enhancers HUES48 Cell Line embryonic stem cell
24 chr8:53502000-53503600 Enhancers iPS-15b Cell Line embryonic stem cell
25 chr8:53502200-53502400 Flanking Active TSS iPS-18 Cell Line embryonic stem cell
26 chr8:53502200-53502400 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
27 chr8:53502200-53502600 Enhancers ES-I3 Cell Line embryonic stem cell
28 chr8:53502200-53502600 Flanking Active TSS H1 Cell Line embryonic stem cell
29 chr8:53502200-53502600 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
30 chr8:53502200-53502600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr8:53502200-53502600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr8:53502200-53502800 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
33 chr8:53502200-53502800 Enhancers H9 Cell Line embryonic stem cell
34 chr8:53502200-53502800 Enhancers HUES6 Cell Line embryonic stem cell
35 chr8:53502200-53502800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
36 chr8:53502200-53503000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
37 chr8:53502200-53503800 Enhancers HUES64 Cell Line embryonic stem cell
38 chr8:53502400-53502600 Enhancers iPS-18 Cell Line embryonic stem cell
39 chr8:53502400-53502600 Enhancers iPS-20b Cell Line embryonic stem cell
40 chr8:53502400-53503000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
41 chr8:53502600-53502800 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
42 chr8:53502600-53503000 Flanking Active TSS iPS-18 Cell Line embryonic stem cell
43 chr8:53502600-53514800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
44 chr8:53502800-53503600 Enhancers iPS-20b Cell Line embryonic stem cell
45 chr8:53505200-53505400 Enhancers iPS-15b Cell Line embryonic stem cell
46 chr8:53505400-53508400 Weak transcription iPS-15b Cell Line embryonic stem cell
47 chr8:53508200-53508600 Enhancers HepG2 liver
48 chr8:53508200-53509800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
49 chr8:53508400-53508800 Enhancers iPS-15b Cell Line embryonic stem cell
50 chr8:53508800-53509200 Enhancers Ovary ovary

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