Variant report

Variant	nsv539671
Chromosome Location	chr8:90104423-90459539
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1528)
CpG islands
(count:183)
Chromatin interactive
region (count:61)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1528 , 50 per page) page: 1 2 3 4 5 6 7 ... 31

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF2	chr8:90416009-90416315	GM12878	blood:	n/a	n/a
2	ATF2	chr8:90255875-90256360	GM12878	blood:	n/a	n/a
3	ATF2	chr8:90163718-90164093	H1-hESC	embryonic stem cell:	n/a	n/a
4	BATF	chr8:90415938-90416281	GM12878	blood:	n/a	chr8:90416131-90416142
5	BATF	chr8:90253735-90253999	GM12878	blood:	n/a	n/a
6	BATF	chr8:90255927-90256384	GM12878	blood:	n/a	chr8:90256178-90256189
7	BATF	chr8:90415981-90416338	GM12878	blood:	n/a	chr8:90416131-90416142
8	BCL11A	chr8:90247995-90248288	H1-hESC	embryonic stem cell:	n/a	n/a
9	BCL11A	chr8:90415997-90416298	GM12878	blood:	n/a	n/a
10	BCL11A	chr8:90163785-90164025	H1-hESC	embryonic stem cell:	n/a	n/a
11	BCL11A	chr8:90415990-90416356	GM12878	blood:	n/a	n/a
12	BCL11A	chr8:90163799-90164016	H1-hESC	embryonic stem cell:	n/a	n/a
13	BCL11A	chr8:90454684-90454983	H1-hESC	embryonic stem cell:	n/a	n/a
14	BHLHE40	chr8:90195508-90195739	HepG2	liver:	n/a	n/a
15	BHLHE40	chr8:90409793-90410025	GM12878	blood:	n/a	n/a
16	BRCA1	chr8:90111164-90111268	Hela-S3	cervix:	n/a	n/a
17	BRCA1	chr8:90239768-90239794	Hela-S3	cervix:	n/a	n/a
18	BRCA1	chr8:90112445-90113476	Hela-S3	cervix:	n/a	n/a
19	CBX3	chr8:90112878-90113581	HCT-116	colon:	n/a	n/a
20	CBX3	chr8:90223127-90223478	K562	blood:	n/a	n/a
21	CBX3	chr8:90122758-90123680	HCT-116	colon:	n/a	n/a
22	CBX3	chr8:90228509-90229166	HCT-116	colon:	n/a	n/a
23	CBX3	chr8:90112663-90113583	HCT-116	colon:	n/a	n/a
24	CBX3	chr8:90325926-90326372	HCT-116	colon:	n/a	n/a
25	CBX3	chr8:90270747-90271394	HCT-116	colon:	n/a	n/a
26	CBX3	chr8:90409656-90410124	HCT-116	colon:	n/a	n/a
27	CBX3	chr8:90213347-90213931	HCT-116	colon:	n/a	n/a
28	CBX3	chr8:90270679-90271444	HCT-116	colon:	n/a	n/a
29	CBX3	chr8:90215005-90215546	HCT-116	colon:	n/a	n/a
30	CBX3	chr8:90334476-90335133	HCT-116	colon:	n/a	chr8:90334838-90334849
31	CCNT2	chr8:90110746-90110939	K562	blood:	n/a	n/a
32	CEBPB	chr8:90270875-90271251	IMR90	lung:	n/a	n/a
33	CEBPB	chr8:90229271-90229493	Hela-S3	cervix:	n/a	chr8:90229379-90229390
34	CEBPB	chr8:90301381-90301751	Hela-S3	cervix:	n/a	n/a
35	CEBPB	chr8:90188740-90188910	HepG2	liver:	n/a	chr8:90188873-90188884
36	CEBPB	chr8:90241182-90241428	HepG2	liver:	n/a	chr8:90241318-90241329 chr8:90241317-90241328
37	CEBPB	chr8:90129351-90129624	IMR90	lung:	n/a	n/a
38	CEBPB	chr8:90301455-90301612	K562	blood:	n/a	n/a
39	CEBPB	chr8:90112862-90113517	HCT-116	colon:	n/a	chr8:90113189-90113202
40	CEBPB	chr8:90113010-90113465	A549	lung:	n/a	chr8:90113189-90113202
41	CEBPB	chr8:90454226-90454367	H1-hESC	embryonic stem cell:	n/a	n/a
42	CEBPB	chr8:90248077-90248338	H1-hESC	embryonic stem cell:	n/a	n/a
43	CEBPB	chr8:90115988-90116234	HepG2	liver:	n/a	chr8:90116086-90116097
44	CEBPB	chr8:90209617-90209858	HepG2	liver:	n/a	n/a
45	CEBPB	chr8:90301385-90301741	HepG2	liver:	n/a	n/a
46	CEBPB	chr8:90115971-90116185	A549	lung:	n/a	chr8:90116086-90116097
47	CEBPB	chr8:90195532-90195831	A549	lung:	n/a	n/a
48	CEBPB	chr8:90208701-90208976	Hela-S3	cervix:	n/a	n/a
49	CEBPB	chr8:90115976-90116223	IMR90	lung:	n/a	chr8:90116086-90116097
50	CEBPB	chr8:90159965-90160127	IMR90	lung:	n/a	chr8:90160073-90160086

(count:183 , 50 per page) page: 1 2 3 4

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr8:90132979-90133029	HUVEC	blood vessel:	n/a
2	chr8:90132979-90133029	PrEC	prostate:	n/a
3	chr8:90427508-90427558	NT2-D1	testis:	n/a
4	chr8:90335066-90335116	HMEC	breast:	n/a
5	chr8:90335066-90335116	AG09319	gingival:	n/a
6	chr8:90132979-90133029	MCF-7	breast:	n/a
7	chr8:90132979-90133029	HL-60	blood:	n/a
8	chr8:90427508-90427558	AG04450	lung:	fetal
9	chr8:90335066-90335116	AG04450	lung:	fetal
10	chr8:90427508-90427558	NH-A	brain:	n/a
11	chr8:90132979-90133029	HNPCEpiC	eye:	n/a
12	chr8:90335066-90335116	MCF-7	breast:	n/a
13	chr8:90427508-90427558	PrEC	prostate:	n/a
14	chr8:90427508-90427558	GM06990	blood:	n/a
15	chr8:90132979-90133029	HEK293	kidney:	embryo
16	chr8:90132979-90133029	HCT-116	colon:	n/a
17	chr8:90132979-90133029	K562	blood:	n/a
18	chr8:90335066-90335116	LNCaP	prostate:	n/a
19	chr8:90427508-90427558	IMR90	lung:	fetal
20	chr8:90335066-90335116	HepG2	liver:	n/a
21	chr8:90132979-90133029	LNCaP	prostate:	n/a
22	chr8:90427508-90427558	HepG2	liver:	n/a
23	chr8:90427508-90427558	BJ	skin:	n/a
24	chr8:90335066-90335116	IMR90	lung:	fetal
25	chr8:90427508-90427558	HRPEpiC	eye:	n/a
26	chr8:90132979-90133029	A549	lung:	n/a
27	chr8:90427508-90427558	NHBE	bronchial:	n/a
28	chr8:90427508-90427558	SAEC	small airway:	n/a
29	chr8:90335066-90335116	SK-N-MC	brain:	n/a
30	chr8:90335066-90335116	Jurkat	blood:	n/a
31	chr8:90132979-90133029	HPAEpiC	pulmonary alveolar:	n/a
32	chr8:90132979-90133029	AG09309	skin:	n/a
33	chr8:90427508-90427558	HCT-116	colon:	n/a
34	chr8:90132979-90133029	AG10803	skin:	n/a
35	chr8:90427508-90427558	GM12892	blood:	n/a
36	chr8:90427508-90427558	HMEC	breast:	n/a
37	chr8:90335066-90335116	HRPEpiC	eye:	n/a
38	chr8:90427508-90427558	T-47D	breast:	n/a
39	chr8:90335066-90335116	RPTEC	kidney:	n/a
40	chr8:90427508-90427558	SK-N-SH	brain:	n/a
41	chr8:90335066-90335116	T-47D	breast:	n/a
42	chr8:90132979-90133029	PANC-1	pancreas:	n/a
43	chr8:90427508-90427558	HUVEC	blood vessel:	n/a
44	chr8:90335066-90335116	Hela-S3	cervix:	n/a
45	chr8:90427508-90427558	AG10803	skin:	n/a
46	chr8:90132979-90133029	HCM	heart:	n/a
47	chr8:90335066-90335116	HCF	heart:	n/a
48	chr8:90132979-90133029	NB4	blood:	n/a
49	chr8:90427508-90427558	BE2_C	brain:	n/a
50	chr8:90132979-90133029	SK-N-SH	brain:	n/a

(count:61 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr17:25670781..25673650-chr8:90215283..90216803,2	MCF-7	breast:
2	chr8:90409960..90412436-chr8:90413000..90414857,2	MCF-7	breast:
3	chr8:90251366..90254240-chr8:90254364..90256338,2	K562	blood:
4	chr8:90270487..90271274-chr8:90627944..90628605,2	MCF-7	breast:
5	chr8:90286981..90288538-chr8:90289952..90292794,2	MCF-7	breast:
6	chr8:90443469..90445041-chr8:90445862..90447518,2	MCF-7	breast:
7	chr11:130374536..130375451-chr8:90305589..90306286,2	MCF-7	breast:
8	chr8:90265140..90266864-chr8:90701198..90702017,6	MCF-7	breast:
9	chr8:90120174..90121731-chr8:90128653..90130886,2	MCF-7	breast:
10	chr8:90303214..90305766-chr8:90314670..90316709,2	MCF-7	breast:
11	chr7:151893342..151896316-chr8:90242317..90244124,2	MCF-7	breast:
12	chr8:90188779..90190304-chr8:90190359..90192960,2	MCF-7	breast:
13	chr8:90188779..90190304-chr8:90190359..90192960,2	MCF-7	breast:
14	chr5:67663197..67663986-chr8:90207088..90207756,2	MCF-7	breast:
15	chr8:90404700..90408275-chr8:90408391..90410365,3	MCF-7	breast:
16	chr8:90409684..90410477-chr8:90701050..90701985,2	MCF-7	breast:
17	chr8:90409960..90412436-chr8:90413000..90414857,2	MCF-7	breast:
18	chr8:90197316..90199111-chr8:90201363..90203409,2	MCF-7	breast:
19	chr8:90313557..90316348-chr8:90316997..90319764,3	MCF-7	breast:
20	chr8:90266351..90268017-chr8:90270603..90272276,2	MCF-7	breast:
21	chr20:46130384..46130956-chr8:90423490..90424387,2	MCF-7	breast:
22	chr8:90402877..90404384-chr8:90409291..90411410,2	MCF-7	breast:
23	chr8:90424990..90426276-chr8:90629028..90629951,3	MCF-7	breast:
24	chr8:90265298..90266142-chr8:90701378..90702003,2	MCF-7	breast:
25	chr8:90437468..90439061-chr8:90443670..90445769,2	MCF-7	breast:
26	chr8:90437468..90439061-chr8:90443670..90445769,2	MCF-7	breast:
27	chr8:90130870..90133130-chr8:90133939..90135476,2	MCF-7	breast:
28	chr8:90298606..90301134-chr8:90303709..90305368,2	K562	blood:
29	chr8:90269810..90272242-chr8:90285565..90287428,2	MCF-7	breast:
30	chr8:90427557..90429111-chr8:90431047..90432856,2	MCF-7	breast:
31	chr8:90265438..90266169-chr8:90409519..90410283,2	MCF-7	breast:
32	chr8:90120174..90121731-chr8:90128653..90130886,2	MCF-7	breast:
33	chr6:166755813..166756563-chr8:90281820..90282340,2	NB4	blood:
34	chr6:34604533..34606803-chr8:90292495..90294211,2	MCF-7	breast:
35	chr8:90264072..90265099-chr8:90628707..90629844,3	MCF-7	breast:
36	chr8:90370793..90373764-chr8:90373827..90376236,2	MCF-7	breast:
37	chr8:90355900..90357965-chr8:90616064..90618024,2	MCF-7	breast:
38	chr8:90370793..90373764-chr8:90373827..90376236,2	MCF-7	breast:
39	chr8:90286981..90288538-chr8:90289952..90292794,2	MCF-7	breast:
40	chr8:90265438..90266169-chr8:90409519..90410283,2	MCF-7	breast:
41	chr8:90402877..90404384-chr8:90409291..90411410,2	MCF-7	breast:
42	chr8:90265202..90266566-chr8:90628957..90629884,16	MCF-7	breast:
43	chr8:90265253..90266327-chr8:90629281..90629934,3	MCF-7	breast:
44	chr8:90269810..90272242-chr8:90285565..90287428,2	MCF-7	breast:
45	chr8:90328134..90330530-chr8:90335776..90338151,2	MCF-7	breast:
46	chr8:90303214..90305766-chr8:90314670..90316709,2	MCF-7	breast:
47	chr8:90197316..90199111-chr8:90201363..90203409,2	MCF-7	breast:
48	chr8:90271580..90272434-chr8:90628969..90629854,5	MCF-7	breast:
49	chr8:90404700..90408275-chr8:90408391..90410365,3	MCF-7	breast:
50	chr8:90427557..90429111-chr8:90431047..90432856,2	MCF-7	breast:

No data

Variant related genes	Relation type
KRT8P4	TF binding region
ENSG00000253621	TF binding region
KRT8P4	CpG island
ENSG00000253621	CpG island
ENSG00000198818	chromatin interactions
ENSG00000251136	chromatin interactions
ENSG00000124151	chromatin interactions
ENSG00000253621	chromatin interactions

Extended variants
information (count: 9914 )
Associated
traits (count: 108 )

Variant overlapped rSNPs/rCNVs (count:9914 , 50 per page) page: 1 2 3 4 5 6 7 ... 199

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs540874413	chr8:90104519-90104520	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs534844068	chr8:90104527-90104528	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs1240070	chr8:90104529-90104530	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
4	rs541983014	chr8:90104532-90104533	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs563249400	chr8:90104575-90104576	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs530564765	chr8:90104576-90104577	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs546465287	chr8:90104600-90104601	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs548625139	chr8:90104611-90104612	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs554254563	chr8:90104623-90104624	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs150890309	chr8:90104661-90104662	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs559682311	chr8:90104676-90104677	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs530018881	chr8:90104696-90104697	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs547836713	chr8:90104698-90104699	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs568506796	chr8:90104802-90104803	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs529326092	chr8:90104811-90104812	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs34845407	chr8:90104819-90104820	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs201294282	chr8:90104820-90104821	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs374437812	chr8:90104821-90104822	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs147027791	chr8:90104832-90104833	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs113163567	chr8:90104841-90104842	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs112628319	chr8:90104842-90104843	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs77029011	chr8:90104843-90104844	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs533519559	chr8:90104855-90104856	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs539458620	chr8:90104858-90104859	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs188128433	chr8:90104959-90104960	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs373516465	chr8:90104961-90104962	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs13276945	chr8:90104962-90104963	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
28	rs13274815	chr8:90104975-90104976	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
29	rs552878699	chr8:90104987-90104988	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs551689092	chr8:90105030-90105031	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs574710392	chr8:90105069-90105070	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs541940112	chr8:90105078-90105079	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs557132364	chr8:90105110-90105111	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs1483376	chr8:90105115-90105116	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
35	rs545483675	chr8:90105126-90105127	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs372273782	chr8:90105153-90105154	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs1240069	chr8:90105157-90105158	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
38	rs528796699	chr8:90105178-90105179	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs540955775	chr8:90105228-90105229	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs116064904	chr8:90105245-90105246	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs529486095	chr8:90105262-90105263	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs181024760	chr8:90105313-90105314	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs7825676	chr8:90105333-90105334	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
44	rs1240068	chr8:90105444-90105445	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
45	rs138260301	chr8:90105456-90105457	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs36059490	chr8:90105460-90105461	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs551502662	chr8:90105492-90105493	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs566894718	chr8:90105517-90105518	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs13279621	chr8:90105523-90105524	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
50	rs546917918	chr8:90105526-90105527	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:108)

Disease	PMID	Source
Wilms tumour	21544195	CNVD
Gastric cancer	17908304	CNVD
Melanoma	18172304	CNVD
Medulloblastoma	21979893	CNVD
Ewing''s sarcoma	21437220	CNVD
Autism	19415332	CNVD
Malaria	21533027	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Esophageal cancer	21851588	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Breast cancer	21245420	CNVD
Thoracic aortic aneurysm	21092924	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
lymphocytic leukemia	21291569	CNVD
Liver carcinoma	19366792	CNVD
Seminomas	18059402	CNVD
Autism	22495311	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Pancreatic cancer	21811587	CNVD
Thyroid cancer	19087340	CNVD
Myelofibrosis	22110671	CNVD
Glioblastoma multiforme	21080181	CNVD
Breast cancer	17603634	CNVD
Testicular cancer	18059402	CNVD
Breast cancer	17133270	CNVD
Breast cancer	21509527	CNVD
Acute myeloid leukemia	20729466	CNVD
Breast cancer	21858162	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Cancer	20164919	CNVD
Esophageal cancer	20955586	CNVD
Multiple myeloma	16461302	CNVD
abnormal development	18461090	CNVD
Oral cancer	21386901	CNVD
Uveal melanoma	21693616	CNVD
Langer-Giedion syndrome	22283845	CNVD
Cancer	21637783	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	20632083	CNVD
Breast cancer	19602461	CNVD
Cancer	22429812	CNVD
Endometrial cancer	22040021	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oral cancer	19627613	CNVD
Prostate cancer	21088497	CNVD
colon cancer	17210682	CNVD
Breast cancer	21264507	CNVD
Breast cancer	22028636	CNVD
Acute myeloid leukemia	16864856	CNVD
Cancer	16751803	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Gastric cancer	17167181	CNVD
Colorectal cancer	19359472	CNVD
Breast cancer	16461572	CNVD
Human rectal carcinomas	16397240	CNVD
Medulloblastoma	16968546	CNVD
head and neck squamous cell carcinoma	18028549	CNVD
Breast cancer	17001317	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Ewing''s sarcoma	17952124	CNVD
Urothelial carcinoma	21177765	CNVD
Lung cancer	18438408	CNVD
Breast cancer	16608533	CNVD
Metanephric adenoma	20802469	CNVD
Hepatocellular carcinoma	18803288	CNVD
Prostate cancer	18632612	CNVD
Glioblastoma multiforme	18628472	CNVD
Ovarian cancer	22174824	CNVD
Prostate cancer	16573809	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Cancer	21949371	CNVD
Non-small cell lung cancer	21829676	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Acute myeloid leukemia	21358987	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Adenocarcinoma	21044232	CNVD
Squamous cell cancer	20885788	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Prostate cancer	16461572	CNVD
Breast cancer	21399628	CNVD
Acute lymphoblastic leukemia	18458336	CNVD
small cell lung cancer	20016488	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Breast cancer	17393978	CNVD
Burkitt''s lymphoma	18698080	CNVD
Non-syndromic sensorineural hearing loss	20606397	CNVD
Bladder cancer	19088036	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Breast cancer	17899364	CNVD
Acute myeloid leukemia	21251322	CNVD
Epilepsy	20502679	CNVD
Breast cancer	20409316	CNVD
Acute myeloid leukemia	19651601	CNVD
head and neck squamous cell carcinoma	19451471	CNVD
Renal cell carcinoma	18765545	CNVD
Basal cell lymphoma	17170743	CNVD
Cutaneous T-cell lymphoma	21881587	CNVD
Breast cancer	21611746	CNVD
Breast cancer	21364760	CNVD
Schizophrenia	23813976	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD

Chromatin state (count:599 , 50 per page) page: 1 2 3 4 5 6 7 ... 12

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:90103800-90113200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr8:90104000-90105000	Enhancers	HUVEC	blood vessel
3	chr8:90106400-90106600	ZNF genes & repeats	Pancreas	Pancrea
4	chr8:90110600-90111000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr8:90110600-90111600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
6	chr8:90110800-90111000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
7	chr8:90110800-90113400	Enhancers	Osteobl	bone
8	chr8:90111000-90112200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
9	chr8:90111000-90112200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
10	chr8:90111600-90112000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
11	chr8:90111800-90114200	Enhancers	Hela-S3	cervix
12	chr8:90112000-90113600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
13	chr8:90112200-90113400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
14	chr8:90112200-90113400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
15	chr8:90112600-90113400	Enhancers	Colon Smooth Muscle	Colon
16	chr8:90112600-90113400	Enhancers	NH-A	brain
17	chr8:90112600-90113400	Enhancers	NHDF-Ad	bronchial
18	chr8:90112600-90113600	Enhancers	HMEC	breast
19	chr8:90113200-90113400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
20	chr8:90113200-90114000	Enhancers	A549	lung
21	chr8:90113400-90113600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
22	chr8:90123000-90123400	ZNF genes & repeats	Primary T helper memory cells from peripheral blood 1	blood
23	chr8:90132400-90132800	Enhancers	ES-I3 Cell Line	embryonic stem cell
24	chr8:90132400-90133200	Enhancers	iPS-15b Cell Line	embryonic stem cell
25	chr8:90132800-90133200	Enhancers	H1 Cell Line	embryonic stem cell
26	chr8:90132800-90133200	Enhancers	HUES48 Cell Line	embryonic stem cell
27	chr8:90132800-90133200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
28	chr8:90137000-90137400	Enhancers	Fetal Heart	heart
29	chr8:90140000-90141800	Enhancers	iPS-20b Cell Line	embryonic stem cell
30	chr8:90140200-90141200	Enhancers	HUES48 Cell Line	embryonic stem cell
31	chr8:90140400-90141200	Enhancers	iPS-18 Cell Line	embryonic stem cell
32	chr8:90140400-90141400	Enhancers	HUES64 Cell Line	embryonic stem cell
33	chr8:90140800-90141000	Enhancers	H9 Cell Line	embryonic stem cell
34	chr8:90140800-90141200	Enhancers	ES-I3 Cell Line	embryonic stem cell
35	chr8:90140800-90141200	Enhancers	iPS-15b Cell Line	embryonic stem cell
36	chr8:90140800-90141800	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
37	chr8:90141000-90141400	Enhancers	HUES6 Cell Line	embryonic stem cell
38	chr8:90141600-90141800	Enhancers	H9 Cell Line	embryonic stem cell
39	chr8:90156000-90156200	Enhancers	Hela-S3	cervix
40	chr8:90156400-90157600	Weak transcription	Hela-S3	cervix
41	chr8:90157600-90158000	Enhancers	Hela-S3	cervix
42	chr8:90157600-90158000	Enhancers	NHDF-Ad	bronchial
43	chr8:90162200-90163400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
44	chr8:90163000-90163600	Enhancers	HUES48 Cell Line	embryonic stem cell
45	chr8:90163400-90163800	Enhancers	H9 Cell Line	embryonic stem cell
46	chr8:90163400-90163800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
47	chr8:90163400-90164000	Enhancers	ES-I3 Cell Line	embryonic stem cell
48	chr8:90163400-90164000	Enhancers	HUES6 Cell Line	embryonic stem cell
49	chr8:90163400-90164200	Enhancers	HUES64 Cell Line	embryonic stem cell
50	chr8:90163400-90164200	Enhancers	iPS-18 Cell Line	embryonic stem cell

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links