Variant report

Variant	nsv539689
Chromosome Location	chr8:99469281-99715845
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1600)
CpG islands
(count:489)
Chromatin interactive
region (count:169)
LncRNA
region (count:13)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1600 , 50 per page) page: 1 2 3 4 5 6 7 ... 32

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr8:99610167-99611383	HepG2	liver:	n/a	n/a
2	ARID3A	chr8:99552839-99553223	K562	blood:	n/a	n/a
3	ARID3A	chr8:99617652-99618214	K562	blood:	n/a	n/a
4	ARID3A	chr8:99483363-99483666	K562	blood:	n/a	n/a
5	ARID3A	chr8:99538862-99539314	K562	blood:	n/a	n/a
6	ARID3A	chr8:99547792-99547835	K562	blood:	n/a	n/a
7	ARID3A	chr8:99625239-99625312	K562	blood:	n/a	n/a
8	ARID3A	chr8:99570483-99570523	HepG2	liver:	n/a	n/a
9	ATF1	chr8:99692816-99692821	K562	blood:	n/a	n/a
10	ATF1	chr8:99552873-99553325	K562	blood:	n/a	n/a
11	ATF1	chr8:99498541-99498735	K562	blood:	n/a	n/a
12	ATF1	chr8:99617828-99618195	K562	blood:	n/a	n/a
13	ATF2	chr8:99700578-99700905	GM12878	blood:	n/a	n/a
14	ATF2	chr8:99613740-99614238	GM12878	blood:	n/a	n/a
15	BACH1	chr8:99625094-99625532	H1-hESC	embryonic stem cell:	n/a	n/a
16	BACH1	chr8:99613674-99614154	H1-hESC	embryonic stem cell:	n/a	n/a
17	BACH1	chr8:99533472-99533482	K562	blood:	n/a	n/a
18	BACH1	chr8:99613776-99614097	K562	blood:	n/a	n/a
19	BACH1	chr8:99625052-99625443	K562	blood:	n/a	n/a
20	BATF	chr8:99483191-99483565	GM12878	blood:	n/a	n/a
21	BATF	chr8:99700549-99700961	GM12878	blood:	n/a	chr8:99700744-99700755
22	BATF	chr8:99613825-99614144	GM12878	blood:	n/a	chr8:99613940-99613951
23	BATF	chr8:99483218-99483540	GM12878	blood:	n/a	n/a
24	BATF	chr8:99700581-99700863	GM12878	blood:	n/a	chr8:99700744-99700755
25	BATF	chr8:99613841-99614109	GM12878	blood:	n/a	chr8:99613940-99613951
26	BCL11A	chr8:99482434-99482768	GM12878	blood:	n/a	n/a
27	BCL11A	chr8:99479549-99479778	GM12878	blood:	n/a	n/a
28	BCLAF1	chr8:99483281-99483636	GM12878	blood:	n/a	n/a
29	BCLAF1	chr8:99483259-99483757	GM12878	blood:	n/a	n/a
30	BCLAF1	chr8:99700593-99700939	GM12878	blood:	n/a	n/a
31	BHLHE40	chr8:99553115-99553231	K562	blood:	n/a	n/a
32	BHLHE40	chr8:99483317-99483606	GM12878	blood:	n/a	n/a
33	BHLHE40	chr8:99679112-99679151	K562	blood:	n/a	n/a
34	BHLHE40	chr8:99482441-99482846	GM12878	blood:	n/a	n/a
35	BRCA1	chr8:99483479-99483628	Hela-S3	cervix:	n/a	n/a
36	BRCA1	chr8:99612546-99612668	Hela-S3	cervix:	n/a	n/a
37	BRCA1	chr8:99525507-99525540	GM12878	blood:	n/a	n/a
38	BRCA1	chr8:99483444-99483690	H1-hESC	embryonic stem cell:	n/a	n/a
39	CBX3	chr8:99682844-99683276	K562	blood:	n/a	n/a
40	CBX3	chr8:99613653-99614294	HCT-116	colon:	n/a	n/a
41	CBX3	chr8:99617651-99618557	K562	blood:	n/a	n/a
42	CBX3	chr8:99543471-99544159	K562	blood:	n/a	n/a
43	CBX3	chr8:99613629-99614225	HCT-116	colon:	n/a	n/a
44	CBX3	chr8:99682942-99683226	K562	blood:	n/a	n/a
45	CBX3	chr8:99616582-99616969	K562	blood:	n/a	n/a
46	CBX3	chr8:99639639-99640036	K562	blood:	n/a	n/a
47	CBX3	chr8:99543429-99543836	HCT-116	colon:	n/a	n/a
48	CBX3	chr8:99552776-99553837	K562	blood:	n/a	n/a
49	CCNT2	chr8:99538938-99539158	K562	blood:	n/a	n/a
50	CEBPB	chr8:99560789-99561031	K562	blood:	n/a	chr8:99560905-99560916

(count:489 , 50 per page) page: 1 2 3 4 5 6 7 ... 10

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr8:99602568-99602618	HEK293	kidney:	embryo
2	chr8:99602568-99602618	HEK293	kidney:	embryo
3	chr8:99499993-99500043	SK-N-SH_RA	brain:	n/a
4	chr8:99602540-99602590	ProgFib	skin:	n/a
5	chr8:99479374-99479424	HNPCEpiC	eye:	n/a
6	chr8:99602540-99602590	HPAEpiC	pulmonary alveolar:	n/a
7	chr8:99602568-99602618	SK-N-SH_RA	brain:	n/a
8	chr8:99670844-99670894	BE2_C	brain:	n/a
9	chr8:99602540-99602590	HCPEpiC	choroid plexus:	n/a
10	chr8:99602609-99602659	AoSMC	blood vessel:	n/a
11	chr8:99670844-99670894	U87	brain:	n/a
12	chr8:99499993-99500043	HRPEpiC	eye:	n/a
13	chr8:99490901-99490951	SKMC	muscle:	n/a
14	chr8:99479374-99479424	CMK	blood:	n/a
15	chr8:99602568-99602618	A549	lung:	n/a
16	chr8:99499993-99500043	HAEpiC	amniotic membrane:	n/a
17	chr8:99670844-99670894	H1-hESC	embryonic stem cell:	embryo
18	chr8:99499993-99500043	AG10803	skin:	n/a
19	chr8:99602540-99602590	GM12892	blood:	n/a
20	chr8:99490901-99490951	HCT-116	colon:	n/a
21	chr8:99499993-99500043	GM12892	blood:	n/a
22	chr8:99499993-99500043	MCF-7	breast:	n/a
23	chr8:99670844-99670894	NB4	blood:	n/a
24	chr8:99602540-99602590	AG10803	skin:	n/a
25	chr8:99490901-99490951	NH-A	brain:	n/a
26	chr8:99490901-99490951	Caco-2	colon:	n/a
27	chr8:99602540-99602590	HRPEpiC	eye:	n/a
28	chr8:99602609-99602659	GM12878	blood:	n/a
29	chr8:99489350-99489400	H1-hESC	embryonic stem cell:	embryo
30	chr8:99489350-99489400	NH-A	brain:	n/a
31	chr8:99670844-99670894	HNPCEpiC	eye:	n/a
32	chr8:99670844-99670894	HCF	heart:	n/a
33	chr8:99602609-99602659	NHBE	bronchial:	n/a
34	chr8:99479374-99479424	PANC-1	pancreas:	n/a
35	chr8:99602609-99602659	NH-A	brain:	n/a
36	chr8:99489350-99489400	NB4	blood:	n/a
37	chr8:99602568-99602618	Hela-S3	cervix:	n/a
38	chr8:99602540-99602590	ECC-1	luminal epithelium:	n/a
39	chr8:99602609-99602659	HCM	heart:	n/a
40	chr8:99489350-99489400	AG09309	skin:	n/a
41	chr8:99602609-99602659	HCF	heart:	n/a
42	chr8:99602609-99602659	SK-N-MC	brain:	n/a
43	chr8:99489350-99489400	GM12892	blood:	n/a
44	chr8:99499993-99500043	BE2_C	brain:	n/a
45	chr8:99602540-99602590	AG09309	skin:	n/a
46	chr8:99499993-99500043	H1-hESC	embryonic stem cell:	embryo
47	chr8:99479374-99479424	HCT-116	colon:	n/a
48	chr8:99602540-99602590	SK-N-MC	brain:	n/a
49	chr8:99479374-99479424	HRE	kidney:	n/a
50	chr8:99499993-99500043	GM19239	blood:	n/a

(count:169 , 50 per page) page: 1 2 3 4

No.	Distal block	Cell Line	Cell type
1	chr8:99552951..99554839-chr8:99564123..99567093,2	K562	blood:
2	chr8:99305859..99308517-chr8:99567304..99569483,2	MCF-7	breast:
3	chr8:99370393..99370939-chr8:99483098..99483860,2	MCF-7	breast:
4	chr8:99481593..99484303-chr8:99484870..99487403,2	K562	blood:
5	chr8:99547855..99550787-chr8:99555161..99557416,2	MCF-7	breast:
6	chr8:99580951..99583147-chr8:99585319..99588307,2	MCF-7	breast:
7	chr8:99661917..99664062-chr8:99692632..99695123,2	MCF-7	breast:
8	chr8:99432219..99434824-chr8:99476981..99478885,2	MCF-7	breast:
9	chr8:99176565..99177464-chr8:99569990..99570552,2	MCF-7	breast:
10	chr8:99570092..99570986-chr8:100009815..100010452,2	MCF-7	breast:
11	chr8:99488977..99492664-chr8:99493319..99496807,5	MCF-7	breast:
12	chr8:99558355..99561109-chr8:99565802..99568182,2	MCF-7	breast:
13	chr8:99552951..99554839-chr8:99564123..99567093,2	K562	blood:
14	chr8:99536690..99539147-chr8:99552855..99554572,2	K562	blood:
15	chr8:99617084..99619037-chr8:99621813..99623940,2	K562	blood:
16	chr8:99520999..99522850-chr8:99534348..99536217,2	K562	blood:
17	chr8:99570015..99570973-chr8:100370433..100371359,3	K562	blood:
18	chr8:99661906..99664329-chr8:99956094..99958895,2	MCF-7	breast:
19	chr8:99384471..99385031-chr8:99482985..99483963,2	MCF-7	breast:
20	chr8:99531565..99534005-chr8:99535385..99538546,3	K562	blood:
21	chr8:99339898..99346485-chr8:99480859..99484990,7	MCF-7	breast:
22	chr8:99527652..99530534-chr8:99540063..99542504,2	MCF-7	breast:
23	chr8:99488393..99491687-chr8:99492350..99494560,3	MCF-7	breast:
24	chr8:23385716..23387742-chr8:99554566..99556123,2	MCF-7	breast:
25	chr1:149223672..149226181-chr8:99494977..99496477,2	K562	blood:
26	chr8:99642735..99645306-chr8:99645506..99647439,2	MCF-7	breast:
27	chr8:99522560..99525164-chr8:99531282..99533245,2	K562	blood:
28	chr8:99522297..99524358-chr8:99525451..99528433,2	K562	blood:
29	chr8:99561270..99563959-chr8:99566385..99568748,2	MCF-7	breast:
30	chr8:99558108..99560568-chr8:99561487..99563992,2	MCF-7	breast:
31	chr8:99394272..99396265-chr8:99482419..99484107,12	MCF-7	breast:
32	chr8:99181984..99182888-chr8:99483123..99483652,2	MCF-7	breast:
33	chr8:99714559..99716252-chr8:99834960..99836799,2	MCF-7	breast:
34	chr8:99569567..99570631-chr8:99717657..99718318,3	MCF-7	breast:
35	chr8:99545068..99548423-chr8:99550336..99555475,4	K562	blood:
36	chr8:99561270..99563959-chr8:99566385..99568748,2	MCF-7	breast:
37	chr2:44949222..44950184-chr8:99688864..99689591,2	MCF-7	breast:
38	chr1:149223550..149224400-chr8:99495957..99496812,7	MCF-7	breast:
39	chr8:99548557..99552364-chr8:99553180..99556021,3	MCF-7	breast:
40	chr8:99522297..99524358-chr8:99525451..99528433,2	K562	blood:
41	chr8:99539907..99541519-chr8:99544944..99547169,2	K562	blood:
42	chr8:99610760..99613076-chr8:99616322..99619231,2	K562	blood:
43	chr8:99369995..99370981-chr8:99483040..99484080,8	MCF-7	breast:
44	chr8:99548557..99552364-chr8:99553180..99556021,3	MCF-7	breast:
45	chr8:99526234..99527955-chr8:99531276..99533264,2	MCF-7	breast:
46	chr8:99618677..99620459-chr8:99649251..99652743,3	K562	blood:
47	chr8:99696324..99697957-chr8:99699839..99702337,2	MCF-7	breast:
48	chr8:99536690..99539147-chr8:99552855..99554572,2	K562	blood:
49	chr8:99608849..99611653-chr8:99620795..99623284,2	K562	blood:
50	chr8:99609344..99611653-chr8:99621339..99623284,2	K562	blood:

(count:13 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-NIPAL2-3	chr8:99608260-99608620	NONHSAT127928
2	lnc-NIPAL2-3	chr8:99591987-99592017	NONHSAT127928
3	lnc-NIPAL2-3	chr8:99607830-99607978	NONHSAT127930
4	lnc-NIPAL2-3	chr8:99614407-99614410	NONHSAT127929
5	lnc-KCNS2-1	chr8:99615481-99615594	ENSG00000253911.1
6	lnc-NIPAL2-3	chr8:99607089-99607273	NONHSAT127928
7	lnc-NIPAL2-3	chr8:99608260-99608397	NONHSAT127930
8	lnc-NIPAL2-3	chr8:99607201-99607346	NONHSAT127930
9	lnc-KCNS2-3	chr8:99645775-99646093	NONHSAT127932
10	lnc-NIPAL2-3	chr8:99607105-99607978	NONHSAT127929
11	lnc-NIPAL2-3	chr8:99614407-99614504	NONHSAT127930
12	lnc-KCNS2-1	chr8:99618382-99618568	ENSG00000253911.1
13	lnc-NIPAL2-3	chr8:99608260-99608397	NONHSAT127929

No data

Variant related genes	Relation type
RNU6-748P	TF binding region
STK3	TF binding region
ENSG00000253911	TF binding region
ENSG00000254112	TF binding region
RNU6-748P	CpG island
STK3	CpG island
ENSG00000253911	CpG island
ENSG00000254112	CpG island
ENSG00000206737	chromatin interactions
ENSG00000132549	chromatin interactions
ENSG00000253911	chromatin interactions
ENSG00000104375	chromatin interactions
ENSG00000104361	chromatin interactions
ENSG00000147454	chromatin interactions
ENSG00000254112	chromatin interactions
ENSG00000253948	chromatin interactions
ENSG00000271930	chromatin interactions
ENSG00000207378	chromatin interactions
ENSG00000164920	chromatin interactions

Extended variants
information (count: 8128 )
Associated
traits (count: 113 )

Variant overlapped rSNPs/rCNVs (count:8128 , 50 per page) page: 1 2 3 4 5 6 7 ... 163

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs544787152	chr8:99469320-99469321	Weak transcription Enhancers Flanking Active TSS Strong transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs531322020	chr8:99469321-99469322	Weak transcription Enhancers Flanking Active TSS Strong transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs551434104	chr8:99469324-99469325	Weak transcription Enhancers Flanking Active TSS Strong transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs564774768	chr8:99469393-99469394	Weak transcription Enhancers Flanking Active TSS Strong transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs527271534	chr8:99469422-99469423	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs141858103	chr8:99469424-99469425	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs75651212	chr8:99469484-99469485	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs371119241	chr8:99469559-99469560	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs17311904	chr8:99469624-99469625	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
10	rs549583558	chr8:99469637-99469638	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
11	rs150811331	chr8:99469643-99469644	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
12	rs537979772	chr8:99469652-99469653	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
13	rs149519400	chr8:99469655-99469656	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
14	rs556484121	chr8:99469656-99469657	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
15	rs571589934	chr8:99469662-99469663	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
16	rs540531338	chr8:99469697-99469698	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
17	rs554160583	chr8:99469704-99469705	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
18	rs574407674	chr8:99469749-99469750	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
19	rs34556077	chr8:99469753-99469754	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
20	rs368123238	chr8:99469785-99469786	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
21	rs556830459	chr8:99469789-99469790	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
22	rs144016030	chr8:99469852-99469853	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs371562751	chr8:99469875-99469876	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs544818303	chr8:99469877-99469878	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs116453439	chr8:99469913-99469914	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs375272172	chr8:99469914-99469915	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs185172637	chr8:99469919-99469920	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs189981231	chr8:99469920-99469921	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs530328771	chr8:99469971-99469972	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs560515531	chr8:99469982-99469983	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs529973478	chr8:99469997-99469998	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs549640522	chr8:99470014-99470015	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs181229708	chr8:99470018-99470019	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs542252598	chr8:99470022-99470023	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs113100426	chr8:99470045-99470046	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs531306230	chr8:99470063-99470064	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs532322592	chr8:99470120-99470121	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs550423056	chr8:99470145-99470146	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs62532751	chr8:99470156-99470157	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs552044329	chr8:99470172-99470173	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs570280348	chr8:99470183-99470184	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs186744004	chr8:99470188-99470189	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs534007791	chr8:99470203-99470204	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs554223774	chr8:99470276-99470277	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs200923544	chr8:99470340-99470341	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs567649691	chr8:99470342-99470343	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs34309401	chr8:99470343-99470344	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs375915519	chr8:99470344-99470345	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs541050827	chr8:99470361-99470362	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs140841003	chr8:99470487-99470488	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:113)

Disease	PMID	Source
Wilms tumour	21544195	CNVD
Gastric cancer	17908304	CNVD
Melanoma	18172304	CNVD
Medulloblastoma	21979893	CNVD
Ewing''s sarcoma	21437220	CNVD
Autism	19415332	CNVD
Malaria	21533027	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Esophageal cancer	21851588	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Breast cancer	21245420	CNVD
Thoracic aortic aneurysm	21092924	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
lymphocytic leukemia	21291569	CNVD
Liver carcinoma	19366792	CNVD
Seminomas	18059402	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Pancreatic cancer	21811587	CNVD
Thyroid cancer	19087340	CNVD
Myelofibrosis	22110671	CNVD
Glioblastoma multiforme	21080181	CNVD
Breast cancer	17603634	CNVD
Testicular cancer	18059402	CNVD
Breast cancer	17133270	CNVD
Breast cancer	21509527	CNVD
Acute myeloid leukemia	20729466	CNVD
Breast cancer	21858162	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Cancer	20164919	CNVD
abnormal development	18461090	CNVD
Oral cancer	21386901	CNVD
Uveal melanoma	21693616	CNVD
Langer-Giedion syndrome	22283845	CNVD
Cancer	21637783	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	20632083	CNVD
Breast cancer	19602461	CNVD
Cancer	22429812	CNVD
Endometrial cancer	22040021	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oral cancer	19627613	CNVD
Prostate cancer	21088497	CNVD
colon cancer	17210682	CNVD
Breast cancer	21264507	CNVD
Breast cancer	22028636	CNVD
Acute myeloid leukemia	16864856	CNVD
Cancer	16751803	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Gastric cancer	17167181	CNVD
Colorectal cancer	19359472	CNVD
Breast cancer	16461572	CNVD
Human rectal carcinomas	16397240	CNVD
Medulloblastoma	16968546	CNVD
head and neck squamous cell carcinoma	18028549	CNVD
Breast cancer	17001317	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Ewing''s sarcoma	17952124	CNVD
Urothelial carcinoma	21177765	CNVD
Lung cancer	18438408	CNVD
Breast cancer	16608533	CNVD
Metanephric adenoma	20802469	CNVD
Hepatocellular carcinoma	18803288	CNVD
Prostate cancer	18632612	CNVD
Glioblastoma multiforme	18628472	CNVD
Ovarian cancer	22174824	CNVD
Prostate cancer	16573809	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Cancer	21949371	CNVD
Non-small cell lung cancer	21829676	CNVD
Multiple myeloma	16461302	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Acute myeloid leukemia	21358987	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Adenocarcinoma	21044232	CNVD
Squamous cell cancer	20885788	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Prostate cancer	16461572	CNVD
Breast cancer	21399628	CNVD
small cell lung cancer	20016488	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Breast cancer	17393978	CNVD
Burkitt''s lymphoma	18698080	CNVD
Non-syndromic sensorineural hearing loss	20606397	CNVD
Bladder cancer	19088036	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Breast cancer	17899364	CNVD
Acute myeloid leukemia	21251322	CNVD
head and neck squamous cell carcinoma	19451471	CNVD
Renal cell carcinoma	18765545	CNVD
Basal cell lymphoma	17170743	CNVD
Colorectal cancer	16774939	CNVD
Autosomal-dominant progressive external ophthalmoplegia	19664747	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Breast cancer	21611746	CNVD
Malignant melanoma	17260012	CNVD
Congenital anomalies of the kidney and urinary tract	20467480	CNVD
Colorectal cancer	19455253	CNVD
Sezary syndrome	18413736	CNVD
Prostate cancer	22341455	CNVD
Breast cancer	22522925	CNVD
Colorectal cancer	21645411	CNVD
T-cell lymphomas	22341440	CNVD
Pancreatic cancer	17952125	CNVD
Stenocardia	21860640	CNVD
Vasospasm	21860640	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Gastric cancer	22014070	CNVD

Chromatin state (count:2318 , 50 per page) page: 1 2 3 4 5 6 7 ... 47

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:99441400-99472600	Weak transcription	Pancreas	Pancrea
2	chr8:99461800-99525000	Weak transcription	Psoas Muscle	Psoas
3	chr8:99464000-99471800	Weak transcription	Lung	lung
4	chr8:99465000-99478600	Weak transcription	HUVEC	blood vessel
5	chr8:99465200-99478800	Weak transcription	A549	lung
6	chr8:99465400-99471600	Weak transcription	Fetal Muscle Leg	muscle
7	chr8:99465600-99469600	Enhancers	NHLF	lung
8	chr8:99465600-99470600	Enhancers	NHDF-Ad	bronchial
9	chr8:99465600-99471400	Weak transcription	Fetal Muscle Trunk	muscle
10	chr8:99465600-99471800	Weak transcription	Primary hematopoietic stem cells	blood
11	chr8:99466200-99470000	Enhancers	Osteobl	bone
12	chr8:99466200-99471400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
13	chr8:99466400-99469600	Weak transcription	Placenta Amnion	Placenta Amnion
14	chr8:99466400-99470800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
15	chr8:99466400-99473600	Weak transcription	Duodenum Smooth Muscle	Duodenum
16	chr8:99466600-99471600	Weak transcription	Aorta	Aorta
17	chr8:99466800-99469400	Weak transcription	Small Intestine	intestine
18	chr8:99466800-99471800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
19	chr8:99466800-99471800	Weak transcription	HSMMtube	muscle
20	chr8:99466800-99474800	Weak transcription	Left Ventricle	heart
21	chr8:99466800-99477200	Weak transcription	Ovary	ovary
22	chr8:99467000-99471600	Weak transcription	Fetal Lung	lung
23	chr8:99467000-99471800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
24	chr8:99467000-99471800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
25	chr8:99467000-99478600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
26	chr8:99467200-99470800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
27	chr8:99467200-99471000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
28	chr8:99467200-99478600	Weak transcription	NH-A	brain
29	chr8:99467200-99478600	Weak transcription	NHEK	skin
30	chr8:99467600-99469400	Strong transcription	Liver	Liver
31	chr8:99467600-99469800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
32	chr8:99468000-99472000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
33	chr8:99468000-99476400	Weak transcription	Fetal Heart	heart
34	chr8:99468200-99469600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
35	chr8:99468200-99471600	Weak transcription	Placenta	Placenta
36	chr8:99468400-99470200	Enhancers	Muscle Satellite Cultured Cells	--
37	chr8:99468600-99469600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
38	chr8:99468600-99469800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
39	chr8:99468800-99469400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
40	chr8:99468800-99471800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
41	chr8:99469000-99470000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
42	chr8:99469200-99469400	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
43	chr8:99469200-99476400	Weak transcription	HSMM	muscle
44	chr8:99469400-99469600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
45	chr8:99469400-99471800	Weak transcription	Liver	Liver
46	chr8:99469600-99469800	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
47	chr8:99469600-99473200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
48	chr8:99469800-99470000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
49	chr8:99469800-99471400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
50	chr8:99470000-99471800	Weak transcription	Osteobl	bone

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links