Variant report

Variant	nsv539913
Chromosome Location	chr9:1320386-1719409
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:2048)
CpG islands
(count:0)
Chromatin interactive
region (count:49)
LncRNA
region (count:14)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:2048 , 50 per page) page: 1 2 3 4 5 6 7 ... 41

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr9:1454262-1454586	HepG2	liver:	n/a	n/a
2	ATF2	chr9:1536424-1536957	GM12878	blood:	n/a	n/a
3	ATF2	chr9:1490307-1491149	GM12878	blood:	n/a	n/a
4	ATF2	chr9:1469879-1470564	GM12878	blood:	n/a	n/a
5	ATF2	chr9:1536421-1536930	GM12878	blood:	n/a	n/a
6	ATF2	chr9:1490362-1491115	GM12878	blood:	n/a	n/a
7	ATF2	chr9:1469886-1470491	GM12878	blood:	n/a	n/a
8	BATF	chr9:1535619-1535903	GM12878	blood:	n/a	n/a
9	BATF	chr9:1470009-1470366	GM12878	blood:	n/a	chr9:1470172-1470183 chr9:1470265-1470278
10	BATF	chr9:1522204-1522433	GM12878	blood:	n/a	n/a
11	BATF	chr9:1505545-1505846	GM12878	blood:	n/a	n/a
12	BATF	chr9:1490300-1491164	GM12878	blood:	n/a	n/a
13	BATF	chr9:1536433-1537132	GM12878	blood:	n/a	chr9:1536673-1536683
14	BATF	chr9:1514759-1515190	GM12878	blood:	n/a	chr9:1514963-1514974
15	BATF	chr9:1490384-1491050	GM12878	blood:	n/a	n/a
16	BATF	chr9:1536479-1536843	GM12878	blood:	n/a	chr9:1536673-1536683
17	BATF	chr9:1468627-1468906	GM12878	blood:	n/a	n/a
18	BATF	chr9:1666546-1666849	GM12878	blood:	n/a	chr9:1666712-1666723
19	BATF	chr9:1522199-1522450	GM12878	blood:	n/a	n/a
20	BCL11A	chr9:1490707-1491032	GM12878	blood:	n/a	n/a
21	BCL11A	chr9:1536449-1536835	GM12878	blood:	n/a	chr9:1536675-1536684
22	BCL11A	chr9:1522157-1522444	GM12878	blood:	n/a	n/a
23	BCL11A	chr9:1554412-1554724	GM12878	blood:	n/a	n/a
24	BCL11A	chr9:1536584-1536781	GM12878	blood:	n/a	chr9:1536675-1536684
25	BCL11A	chr9:1490371-1491127	GM12878	blood:	n/a	n/a
26	BCL11A	chr9:1522572-1522804	GM12878	blood:	n/a	n/a
27	BCL3	chr9:1458432-1458804	GM12878	blood:	n/a	chr9:1458740-1458749 chr9:1458739-1458748
28	BCL3	chr9:1536446-1536852	GM12878	blood:	n/a	chr9:1536675-1536684
29	BCL3	chr9:1469934-1470495	GM12878	blood:	n/a	n/a
30	BCL3	chr9:1458553-1458815	GM12878	blood:	n/a	chr9:1458740-1458749 chr9:1458739-1458748
31	BCLAF1	chr9:1490297-1491172	GM12878	blood:	n/a	n/a
32	BCLAF1	chr9:1604933-1605323	GM12878	blood:	n/a	n/a
33	BCLAF1	chr9:1490418-1491093	GM12878	blood:	n/a	n/a
34	BHLHE40	chr9:1329191-1329209	GM12878	blood:	n/a	n/a
35	BHLHE40	chr9:1536541-1536940	GM12878	blood:	n/a	n/a
36	BHLHE40	chr9:1460181-1460500	HepG2	liver:	n/a	n/a
37	BHLHE40	chr9:1522159-1522989	GM12878	blood:	n/a	n/a
38	BHLHE40	chr9:1469908-1470375	GM12878	blood:	n/a	n/a
39	BHLHE40	chr9:1490542-1491092	GM12878	blood:	n/a	n/a
40	BHLHE40	chr9:1425741-1425826	GM12878	blood:	n/a	n/a
41	BHLHE40	chr9:1629945-1630149	HepG2	liver:	n/a	n/a
42	BRCA1	chr9:1490830-1490954	GM12878	blood:	n/a	n/a
43	BRCA1	chr9:1604021-1604050	GM12878	blood:	n/a	n/a
44	CEBPB	chr9:1521558-1521933	MCF-7	breast:	n/a	chr9:1521743-1521752 chr9:1521743-1521752 chr9:1521742-1521753 chr9:1521743-1521752 chr9:1521743-1521752
45	CEBPB	chr9:1613054-1613090	K562	blood:	n/a	chr9:1613075-1613086
46	CEBPB	chr9:1455810-1456079	HepG2	liver:	n/a	n/a
47	CEBPB	chr9:1612948-1613252	MCF-7	breast:	n/a	chr9:1613075-1613086
48	CEBPB	chr9:1545147-1545372	HepG2	liver:	n/a	chr9:1545280-1545291
49	CEBPB	chr9:1668703-1668924	HepG2	liver:	n/a	chr9:1668782-1668793
50	CEBPB	chr9:1521582-1521952	MCF-7	breast:	n/a	chr9:1521743-1521752 chr9:1521743-1521752 chr9:1521742-1521753 chr9:1521743-1521752 chr9:1521743-1521752

No data

(count:49 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr9:1315772..1318545-chr9:1320375..1322632,2	K562	blood:
2	chr9:1709062..1709904-chr9:1836847..1837727,2	MCF-7	breast:
3	chr9:1605194..1607051-chr9:1607421..1609783,2	MCF-7	breast:
4	chr9:1463195..1465097-chr9:1468058..1470697,2	MCF-7	breast:
5	chr9:1453549..1456481-chr9:1457480..1459717,2	K562	blood:
6	chr9:1459863..1460905-chr9:1619604..1620748,6	MCF-7	breast:
7	chr9:1474110..1476318-chr9:1485269..1488138,2	MCF-7	breast:
8	chr9:1459729..1460626-chr9:1605062..1605562,2	MCF-7	breast:
9	chr9:1709091..1710013-chr9:1869550..1870469,3	MCF-7	breast:
10	chr9:1329896..1332390-chr9:1334019..1336447,2	MCF-7	breast:
11	chr9:1376504..1378788-chr9:1379688..1382512,2	MCF-7	breast:
12	chr9:1604812..1606126-chr9:1619456..1620358,3	MCF-7	breast:
13	chr9:1459729..1460626-chr9:1605062..1605562,2	MCF-7	breast:
14	chr9:1414222..1417184-chr9:1419869..1422079,2	K562	blood:
15	chr9:1017972..1018656-chr9:1527877..1528623,2	MCF-7	breast:
16	chr9:1474110..1476318-chr9:1485269..1488138,2	MCF-7	breast:
17	chr9:1459862..1460804-chr9:1527712..1529112,4	MCF-7	breast:
18	chr9:1100954..1101519-chr9:1619985..1620571,2	MCF-7	breast:
19	chr9:1329896..1332390-chr9:1334019..1336447,2	MCF-7	breast:
20	chr9:1454281..1457237-chr9:1457484..1459959,2	MCF-7	breast:
21	chr9:1463195..1465097-chr9:1468058..1470697,2	MCF-7	breast:
22	chr9:1453549..1456481-chr9:1457480..1459717,2	K562	blood:
23	chr9:1444036..1446024-chr9:1452969..1455867,2	MCF-7	breast:
24	chr9:1444036..1446024-chr9:1452969..1455867,2	MCF-7	breast:
25	chr9:1459777..1461278-chr9:1604683..1605512,7	MCF-7	breast:
26	chr9:1492000..1494748-chr9:1498884..1501267,2	MCF-7	breast:
27	chr9:1101941..1102561-chr9:1429407..1430134,2	MCF-7	breast:
28	chr9:1049884..1050964-chr9:1336243..1337456,4	MCF-7	breast:
29	chr9:1604812..1606126-chr9:1619456..1620358,3	MCF-7	breast:
30	chr9:1709079..1709791-chr9:1869643..1870482,2	MCF-7	breast:
31	chr9:1492000..1494748-chr9:1498884..1501267,2	MCF-7	breast:
32	chr9:1459863..1460905-chr9:1619604..1620748,6	MCF-7	breast:
33	chr9:1017795..1018400-chr9:1429068..1429992,2	MCF-7	breast:
34	chr9:1459863..1460538-chr9:1837555..1838175,2	MCF-7	breast:
35	chr9:1414222..1417184-chr9:1419869..1422079,2	K562	blood:
36	chr9:1433839..1434724-chr9:1619824..1620539,2	MCF-7	breast:
37	chr9:1376504..1378788-chr9:1379688..1382512,2	MCF-7	breast:
38	chr9:1459862..1460804-chr9:1527712..1529112,4	MCF-7	breast:
39	chr9:1454281..1457237-chr9:1457484..1459959,2	MCF-7	breast:
40	chr9:1100898..1101474-chr9:1619645..1620185,2	MCF-7	breast:
41	chr9:1433839..1434724-chr9:1619824..1620539,2	MCF-7	breast:
42	chr9:1605194..1607051-chr9:1607421..1609783,2	MCF-7	breast:
43	chr9:1017910..1018696-chr9:1429132..1429802,2	MCF-7	breast:
44	chr9:1459777..1461278-chr9:1604683..1605512,7	MCF-7	breast:
45	chr9:1100633..1101579-chr9:1428962..1429946,8	MCF-7	breast:
46	chr9:1017828..1018465-chr9:1337011..1337699,2	MCF-7	breast:
47	chr9:1100638..1101499-chr9:1337048..1337780,3	MCF-7	breast:
48	chr9:1100620..1101481-chr9:1337009..1337893,4	MCF-7	breast:
49	chr9:1049884..1051008-chr9:1336243..1337579,9	MCF-7	breast:

(count:14 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-SMARCA2-2	chr9:1633518-1633545	XLOC_007264
2	lnc-DMRT2-6	chr9:1368147-1368400	NONHSAT129976
3	lnc-DMRT2-6	chr9:1354235-1354272	NONHSAT129976
4	lnc-DMRT2-2	chr9:1327074-1327173	XLOC_007263
5	lnc-DMRT2-2	chr9:1321456-1321494	NONHSAT129967
6	lnc-DMRT2-2	chr9:1327074-1327173	XLOC_007263
7	lnc-DMRT2-2	chr9:1321457-1321494	XLOC_007263
8	lnc-DMRT2-2	chr9:1327073-1327173	NONHSAT129967
9	lnc-DMRT2-2	chr9:1321457-1321494	XLOC_007263
10	lnc-DMRT2-2	chr9:1328425-1328584	XLOC_007263
11	lnc-DMRT2-2	chr9:1328425-1328435	XLOC_007263
12	lnc-DMRT2-5	chr9:1328664-1328987	NONHSAT129974
13	lnc-SMARCA2-2	chr9:1718867-1718912	XLOC_007264
14	lnc-DMRT2-2	chr9:1328424-1328584	NONHSAT129967

No data

Variant related genes	Relation type
ENSG00000233575	TF binding region
RNA5SP279	TF binding region
ENSG00000173253	chromatin interactions
AP3D1	miRNA target sites

Extended variants
information (count: 15292 )
Associated
traits (count: 107 )

Variant overlapped rSNPs/rCNVs (count:15292 , 50 per page) page: 1 2 3 4 5 6 7 ... 306

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs528160363	chr9:1320413-1320414	Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs547796723	chr9:1320417-1320418	Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs115339320	chr9:1320425-1320426	Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs530739499	chr9:1320437-1320438	Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs550456056	chr9:1320447-1320448	Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs544475949	chr9:1320452-1320453	Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs368822586	chr9:1320454-1320455	Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs570663371	chr9:1320485-1320486	Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs191275123	chr9:1320532-1320533	Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs564643776	chr9:1320573-1320574	Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs184965331	chr9:1320617-1320618	Enhancers Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
12	rs566870615	chr9:1320641-1320642	Enhancers Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
13	rs535929830	chr9:1320642-1320643	Enhancers Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
14	rs112556192	chr9:1320713-1320714	Enhancers Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
15	rs147962343	chr9:1320723-1320724	Enhancers Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
16	rs11790922	chr9:1320743-1320744	Enhancers Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
17	rs189347304	chr9:1320755-1320756	Enhancers Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
18	rs376298895	chr9:1320802-1320803	Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs577337635	chr9:1320805-1320806	Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs546405997	chr9:1320858-1320859	Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs72687269	chr9:1320866-1320867	Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs181682426	chr9:1320871-1320872	Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs11790506	chr9:1320872-1320873	Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs150405026	chr9:1320910-1320911	Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs572884726	chr9:1320920-1320921	Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs138116442	chr9:1320935-1320936	Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs561390409	chr9:1320949-1320950	Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs530413721	chr9:1321014-1321015	Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs543761366	chr9:1321033-1321034	Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs529732504	chr9:1321080-1321081	Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs186682937	chr9:1321086-1321087	Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs115637908	chr9:1321115-1321116	Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs56228181	chr9:1321122-1321123	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
34	rs55874622	chr9:1321155-1321156	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
35	rs149600845	chr9:1321192-1321193	Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs190000188	chr9:1321242-1321243	Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs538440164	chr9:1321250-1321251	Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs181266029	chr9:1321255-1321256	Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs374694913	chr9:1321274-1321275	Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs538246452	chr9:1321283-1321284	Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs186307015	chr9:1321291-1321292	Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs189775951	chr9:1321294-1321295	Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs534489314	chr9:1321364-1321365	Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs554097833	chr9:1321386-1321387	Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs7859432	chr9:1321394-1321395	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
46	rs7870550	chr9:1321409-1321410	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
47	rs79500394	chr9:1321411-1321412	Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs555049858	chr9:1321425-1321426	Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs182111639	chr9:1321500-1321501	Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs145050429	chr9:1321506-1321507	Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:107)

Disease	PMID	Source
Ovarian cancer	21720365	CNVD
Myelofibrosis	22110671	CNVD
Lynch syndrome	18415027	CNVD
Retinoblastoma	21504564	CNVD
Melanoma	18172304	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Glioblastoma multiforme	22286061	CNVD
Williams-beuren syndrome	18553513	CNVD
Disorders of sex development	21048976	CNVD
Pilocytic astrocytoma	18622384	CNVD
Pilomyxoid astrocytoma	18622384	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
prenatal diagnosis	20453657	CNVD
Gastric cancer	16715143	CNVD
Esophageal squamous carcinoma	18405350	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Intracranial aneurysm	16715129	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Disorders of sex development	22290220	CNVD
Glioblastoma multiforme	21080181	CNVD
Sudden cardiac death	19188705	CNVD
Non-small cell lung cancer	21829676	CNVD
Acute myeloid leukemia	16864856	CNVD
Cancer	21183584	CNVD
Non-small cell lung cancer	21952639	CNVD
Neuroblastoma	18923191	CNVD
Intellectual disability	22102821	CNVD
abnormal development	18461090	CNVD
Honadal dysgenesis	21048976	CNVD
Medulloblastoma	21979893	CNVD
Lung cancer	16740712	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Breast cancer	16608533	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Breast cancer	16272173	CNVD
Hepatocellular carcinoma	16750200	CNVD
Breast cancer	17133270	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Cervical cancer	21063398	CNVD
Retinoblastoma	22278416	CNVD
Splenic marginal zone lymphoma	18492102	CNVD
Biliary cancer	19435499	CNVD
Gastric cancer	21586687	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Myopathy	18421352	CNVD
Neuroblastoma	18664255	CNVD
Acute lymphoblastic leukemia	18957548	CNVD
Myeloproliferative neoplasm	17564968	CNVD
Malignant meningioma	17937814	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	17603634	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oligodendroglial tumors	17285580	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
microdeletion syndrome	16199537	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Cancer	20164919	CNVD
Chronic myeloid leukemia	21384125	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
small cell lung cancer	20016488	CNVD
Developmental delay	21147756	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Lung cancer	18438408	CNVD
Autism	20531469	CNVD
XY gonadal dysgenesis	20685758	CNVD
Urothelial carcinoma	21177765	CNVD
Oral cancer	21386901	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Myelodysplastic syndrome	21251322	CNVD
Breast cancer	21785460	CNVD
Prostate cancer	18632612	CNVD
Esophageal adenocarcinoma	19417022	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21364760	CNVD
Breast cancer	21858162	CNVD
Renal cell carcinoma	21668985	CNVD
Autism	22495311	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Esophageal cancer	21851588	CNVD
Bipolar disorder	19114987	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Gastrointestinal stromal cancer	20877625	CNVD
Renal cell carcinoma	21215367	CNVD
Schizophrenia	23813976	CNVD

Chromatin state (count:320 , 50 per page) page: 1 2 3 4 5 6 7

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:1318200-1321600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
2	chr9:1318400-1321600	Enhancers	Adipose Nuclei	Adipose
3	chr9:1318600-1321200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr9:1318600-1321400	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
5	chr9:1318800-1321400	Enhancers	Fetal Stomach	stomach
6	chr9:1318800-1321600	Enhancers	Fetal Muscle Leg	muscle
7	chr9:1320000-1321600	Enhancers	Fetal Lung	lung
8	chr9:1320600-1320800	Bivalent Enhancer	Muscle Satellite Cultured Cells	--
9	chr9:1321000-1321400	Enhancers	Colon Smooth Muscle	Colon
10	chr9:1321000-1321400	Enhancers	Fetal Muscle Trunk	muscle
11	chr9:1321200-1321800	Enhancers	Skeletal Muscle Male	skeletal muscle
12	chr9:1321600-1332200	Weak transcription	Adipose Nuclei	Adipose
13	chr9:1323400-1323600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
14	chr9:1325600-1326000	Enhancers	Fetal Brain Male	brain
15	chr9:1326000-1331600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
16	chr9:1327200-1328800	Enhancers	Fetal Lung	lung
17	chr9:1327400-1327600	Enhancers	Fetal Stomach	stomach
18	chr9:1328400-1328800	Enhancers	Gastric	stomach
19	chr9:1328800-1340400	Weak transcription	Fetal Lung	lung
20	chr9:1331000-1331800	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
21	chr9:1331400-1332800	Enhancers	Fetal Stomach	stomach
22	chr9:1331600-1332400	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
23	chr9:1332000-1332600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
24	chr9:1332200-1332600	Enhancers	Adipose Nuclei	Adipose
25	chr9:1332400-1332800	Enhancers	Colon Smooth Muscle	Colon
26	chr9:1332600-1340200	Weak transcription	Adipose Nuclei	Adipose
27	chr9:1337200-1337600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
28	chr9:1337400-1337800	Enhancers	Liver	Liver
29	chr9:1339000-1339400	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
30	chr9:1340000-1341000	Enhancers	Fetal Stomach	stomach
31	chr9:1340200-1340800	Enhancers	Adipose Nuclei	Adipose
32	chr9:1340400-1340600	Enhancers	Fetal Lung	lung
33	chr9:1349200-1349800	Enhancers	Adipose Nuclei	Adipose
34	chr9:1349800-1354600	Weak transcription	Adipose Nuclei	Adipose
35	chr9:1354200-1354600	Enhancers	Muscle Satellite Cultured Cells	--
36	chr9:1354400-1356800	Enhancers	HSMMtube	muscle
37	chr9:1354600-1355200	Enhancers	HSMM	muscle
38	chr9:1354600-1356000	Enhancers	Adipose Nuclei	Adipose
39	chr9:1354800-1356000	Enhancers	Fetal Muscle Leg	muscle
40	chr9:1356000-1362800	Weak transcription	Adipose Nuclei	Adipose
41	chr9:1362400-1363000	Enhancers	ES-I3 Cell Line	embryonic stem cell
42	chr9:1362800-1363200	Enhancers	HUES48 Cell Line	embryonic stem cell
43	chr9:1362800-1363200	Enhancers	HUES6 Cell Line	embryonic stem cell
44	chr9:1362800-1363200	Enhancers	Adipose Nuclei	Adipose
45	chr9:1364400-1367000	Enhancers	Primary T killer memory cells from peripheral blood	blood
46	chr9:1365000-1367400	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
47	chr9:1365600-1366400	Enhancers	Primary T killer naive cells fromperipheralblood	blood
48	chr9:1366600-1367400	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
49	chr9:1373400-1373600	Enhancers	Adipose Nuclei	Adipose
50	chr9:1373600-1384000	Weak transcription	Adipose Nuclei	Adipose

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links