Variant report

Variant nsv540046
Chromosome Location chr9:11952521-12357074
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:230 , 50 per page) page: 1 2 3 4 5
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:11966600-11967200 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr9:11966800-11967200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr9:11966800-11967200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
4 chr9:11966800-11967400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
5 chr9:11968800-11969000 Enhancers Pancreas Pancrea
6 chr9:11972800-11973200 Enhancers Placenta Amnion Placenta Amnion
7 chr9:11975000-11975200 Enhancers Pancreatic Islets Pancreatic Islet
8 chr9:11975600-11976200 Enhancers Fetal Brain Male brain
9 chr9:11976000-11976200 Enhancers Pancreatic Islets Pancreatic Islet
10 chr9:11977400-11977600 Enhancers Pancreatic Islets Pancreatic Islet
11 chr9:11991400-11994000 Enhancers Cortex derived primary cultured neurospheres brain
12 chr9:11991800-11992200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr9:11991800-11992200 Enhancers Fetal Heart heart
14 chr9:11991800-11993400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
15 chr9:11992400-11993200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
16 chr9:11993000-11993800 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
17 chr9:11995800-11996600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
18 chr9:11995800-11998200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr9:11996600-11996800 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
20 chr9:12017400-12019600 Weak transcription Fetal Heart heart
21 chr9:12019600-12021400 Enhancers Fetal Heart heart
22 chr9:12046400-12046800 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
23 chr9:12046800-12048000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
24 chr9:12048000-12048400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
25 chr9:12054200-12054600 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
26 chr9:12057600-12059000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
27 chr9:12058400-12060400 Enhancers Fetal Intestine Large intestine
28 chr9:12059000-12060000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
29 chr9:12060000-12065800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
30 chr9:12060200-12060400 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
31 chr9:12060400-12061400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
32 chr9:12060400-12065000 Weak transcription Fetal Intestine Large intestine
33 chr9:12061400-12061800 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
34 chr9:12061400-12062000 Enhancers Placenta Amnion Placenta Amnion
35 chr9:12061600-12061800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
36 chr9:12061800-12064200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
37 chr9:12064200-12065600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
38 chr9:12065000-12065800 Enhancers Fetal Intestine Large intestine
39 chr9:12076400-12076600 Flanking Bivalent TSS/Enh Breast Myoepithelial Primary Cells Breast
40 chr9:12076400-12076800 Flanking Bivalent TSS/Enh ES-UCSF4 Cell Line embryonic stem cell
41 chr9:12076600-12076800 Bivalent/Poised TSS Breast Myoepithelial Primary Cells Breast
42 chr9:12091200-12096400 Enhancers Placenta Amnion Placenta Amnion
43 chr9:12091600-12092600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
44 chr9:12091800-12092200 Enhancers HUES6 Cell Line embryonic stem cell
45 chr9:12092600-12096200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
46 chr9:12096200-12096400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
47 chr9:12096400-12101600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
48 chr9:12101600-12102200 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
49 chr9:12101600-12102400 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
50 chr9:12101800-12102800 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

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