Variant report

Variant nsv540055
Chromosome Location chr9:12031527-12302913
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:161 , 50 per page) page: 1 2 3 4
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:12046400-12046800 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
2 chr9:12046800-12048000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
3 chr9:12048000-12048400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
4 chr9:12054200-12054600 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr9:12057600-12059000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
6 chr9:12058400-12060400 Enhancers Fetal Intestine Large intestine
7 chr9:12059000-12060000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
8 chr9:12060000-12065800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
9 chr9:12060200-12060400 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
10 chr9:12060400-12061400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
11 chr9:12060400-12065000 Weak transcription Fetal Intestine Large intestine
12 chr9:12061400-12061800 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
13 chr9:12061400-12062000 Enhancers Placenta Amnion Placenta Amnion
14 chr9:12061600-12061800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
15 chr9:12061800-12064200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
16 chr9:12064200-12065600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
17 chr9:12065000-12065800 Enhancers Fetal Intestine Large intestine
18 chr9:12076400-12076600 Flanking Bivalent TSS/Enh Breast Myoepithelial Primary Cells Breast
19 chr9:12076400-12076800 Flanking Bivalent TSS/Enh ES-UCSF4 Cell Line embryonic stem cell
20 chr9:12076600-12076800 Bivalent/Poised TSS Breast Myoepithelial Primary Cells Breast
21 chr9:12091200-12096400 Enhancers Placenta Amnion Placenta Amnion
22 chr9:12091600-12092600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
23 chr9:12091800-12092200 Enhancers HUES6 Cell Line embryonic stem cell
24 chr9:12092600-12096200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr9:12096200-12096400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
26 chr9:12096400-12101600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
27 chr9:12101600-12102200 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
28 chr9:12101600-12102400 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
29 chr9:12101800-12102800 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
30 chr9:12102400-12104200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
31 chr9:12104200-12104400 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
32 chr9:12135800-12137400 Enhancers Fetal Heart heart
33 chr9:12137600-12138400 Enhancers Placenta Amnion Placenta Amnion
34 chr9:12137800-12138200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
35 chr9:12139800-12142600 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
36 chr9:12142400-12144000 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
37 chr9:12155400-12156200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
38 chr9:12156200-12161400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
39 chr9:12161400-12167200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
40 chr9:12161600-12164800 Enhancers Brain Germinal Matrix brain
41 chr9:12162200-12162400 Active TSS Brain Anterior Caudate brain
42 chr9:12162200-12162600 Active TSS Brain Angular Gyrus brain
43 chr9:12162200-12162800 Enhancers Cortex derived primary cultured neurospheres brain
44 chr9:12162200-12163200 Enhancers Fetal Brain Female brain
45 chr9:12162400-12162600 Flanking Active TSS Brain Anterior Caudate brain
46 chr9:12162400-12162600 Enhancers Brain Dorsolateral Prefrontal Cortex brain
47 chr9:12162400-12162800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr9:12162400-12163000 Enhancers Brain Hippocampus Middle brain
49 chr9:12162600-12162800 Enhancers Brain Anterior Caudate brain
50 chr9:12162600-12163000 Enhancers Brain Angular Gyrus brain

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