Variant report

Variant	nsv540414
Chromosome Location	chr10:1284040-1388052
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF2	chr10:1351764-1353393	H1-hESC	embryonic stem cell:	n/a	n/a
2	ATF2	chr10:1366161-1366565	GM12878	blood:	n/a	n/a
3	ATF2	chr10:1351854-1352897	H1-hESC	embryonic stem cell:	n/a	n/a
4	BATF	chr10:1363107-1363415	GM12878	blood:	n/a	n/a
5	BATF	chr10:1366133-1366580	GM12878	blood:	n/a	chr10:1366354-1366365
6	BATF	chr10:1366184-1366543	GM12878	blood:	n/a	chr10:1366354-1366365
7	BCL11A	chr10:1366177-1366596	GM12878	blood:	n/a	n/a
8	BHLHE40	chr10:1285906-1286219	K562	blood:	n/a	n/a
9	BHLHE40	chr10:1366192-1366693	GM12878	blood:	n/a	n/a
10	BHLHE40	chr10:1332362-1332614	HepG2	liver:	n/a	n/a
11	CEBPB	chr10:1327655-1327840	HepG2	liver:	n/a	n/a
12	CEBPB	chr10:1311063-1311450	Hela-S3	cervix:	n/a	chr10:1311257-1311268 chr10:1311257-1311266 chr10:1311252-1311269 chr10:1311255-1311268 chr10:1311416-1311428 chr10:1311255-1311266 chr10:1311257-1311266 chr10:1311257-1311266 chr10:1311257-1311266
13	CEBPB	chr10:1297204-1297473	K562	blood:	n/a	chr10:1297345-1297356
14	CEBPB	chr10:1311072-1311434	K562	blood:	n/a	chr10:1311257-1311268 chr10:1311257-1311266 chr10:1311252-1311269 chr10:1311255-1311268 chr10:1311416-1311428 chr10:1311255-1311266 chr10:1311257-1311266 chr10:1311257-1311266 chr10:1311257-1311266
15	CEBPB	chr10:1311080-1311454	H1-hESC	embryonic stem cell:	n/a	chr10:1311257-1311268 chr10:1311257-1311266 chr10:1311252-1311269 chr10:1311255-1311268 chr10:1311416-1311428 chr10:1311255-1311266 chr10:1311257-1311266 chr10:1311257-1311266 chr10:1311257-1311266
16	CEBPB	chr10:1310983-1311481	MCF-7	breast:	n/a	chr10:1311257-1311268 chr10:1311257-1311266 chr10:1311252-1311269 chr10:1311255-1311268 chr10:1311416-1311428 chr10:1311255-1311266 chr10:1311257-1311266 chr10:1311257-1311266 chr10:1311257-1311266
17	CEBPB	chr10:1311084-1311430	A549	lung:	n/a	chr10:1311257-1311268 chr10:1311257-1311266 chr10:1311252-1311269 chr10:1311255-1311268 chr10:1311416-1311428 chr10:1311255-1311266 chr10:1311257-1311266 chr10:1311257-1311266 chr10:1311257-1311266
18	CEBPB	chr10:1310851-1311513	MCF-7	breast:	n/a	chr10:1311257-1311268 chr10:1311257-1311266 chr10:1311252-1311269 chr10:1311255-1311268 chr10:1311416-1311428 chr10:1311255-1311266 chr10:1311257-1311266 chr10:1311257-1311266 chr10:1311257-1311266
19	CEBPB	chr10:1311019-1311420	A549	lung:	n/a	chr10:1311257-1311268 chr10:1311257-1311266 chr10:1311252-1311269 chr10:1311255-1311268 chr10:1311255-1311266 chr10:1311257-1311266 chr10:1311257-1311266 chr10:1311257-1311266
20	CEBPB	chr10:1330271-1330486	A549	lung:	n/a	chr10:1330436-1330453 chr10:1330437-1330448
21	CEBPB	chr10:1311152-1311383	ECC-1	luminal epithelium:	n/a	chr10:1311257-1311268 chr10:1311257-1311266 chr10:1311252-1311269 chr10:1311255-1311268 chr10:1311255-1311266 chr10:1311257-1311266 chr10:1311257-1311266 chr10:1311257-1311266
22	CEBPB	chr10:1297229-1297429	HepG2	liver:	n/a	chr10:1297345-1297356
23	CEBPB	chr10:1343136-1343146	HepG2	liver:	n/a	n/a
24	CEBPB	chr10:1311047-1311422	K562	blood:	n/a	chr10:1311257-1311268 chr10:1311257-1311266 chr10:1311252-1311269 chr10:1311255-1311268 chr10:1311255-1311266 chr10:1311257-1311266 chr10:1311257-1311266 chr10:1311257-1311266
25	CEBPB	chr10:1311133-1311380	IMR90	lung:	n/a	chr10:1311257-1311268 chr10:1311257-1311266 chr10:1311252-1311269 chr10:1311255-1311268 chr10:1311255-1311266 chr10:1311257-1311266 chr10:1311257-1311266 chr10:1311257-1311266
26	CEBPB	chr10:1291398-1291532	H1-hESC	embryonic stem cell:	n/a	n/a
27	CEBPB	chr10:1311078-1311437	HepG2	liver:	n/a	chr10:1311257-1311268 chr10:1311257-1311266 chr10:1311252-1311269 chr10:1311255-1311268 chr10:1311416-1311428 chr10:1311255-1311266 chr10:1311257-1311266 chr10:1311257-1311266 chr10:1311257-1311266
28	CEBPB	chr10:1375321-1375514	IMR90	lung:	n/a	n/a
29	CEBPB	chr10:1375300-1375557	HepG2	liver:	n/a	n/a
30	CEBPB	chr10:1335878-1336092	Hela-S3	cervix:	n/a	n/a
31	CHD1	chr10:1352136-1352532	H1-hESC	embryonic stem cell:	n/a	n/a
32	CHD1	chr10:1352757-1353269	H1-hESC	embryonic stem cell:	n/a	n/a
33	CHD2	chr10:1339840-1340059	H1-hESC	embryonic stem cell:	n/a	n/a
34	CHD2	chr10:1332288-1332493	Hela-S3	cervix:	n/a	n/a
35	CHD2	chr10:1351733-1353006	H1-hESC	embryonic stem cell:	n/a	n/a
36	CHD2	chr10:1334928-1335311	H1-hESC	embryonic stem cell:	n/a	n/a
37	CTBP2	chr10:1351493-1352957	H1-hESC	embryonic stem cell:	n/a	n/a
38	CTCF	chr10:1339800-1339950	SK-N-SH_RA	brain:	n/a	n/a
39	CTCF	chr10:1368997-1369065	Kidney_OC	kidney:	n/a	n/a
40	CTCF	chr10:1343439-1343653	Hela-S3	cervix:	n/a	n/a
41	CTCF	chr10:1339864-1339963	NHEK	skin:	n/a	n/a
42	CTCF	chr10:1343420-1343570	MCF-7	breast:	n/a	n/a
43	CTCF	chr10:1343440-1343590	HCT-116	colon:	n/a	n/a
44	CTCF	chr10:1343420-1343570	HEK293	kidney:	n/a	n/a
45	CTCF	chr10:1339860-1340010	MCF-7	breast:	n/a	n/a
46	CTCF	chr10:1317480-1317630	HUVEC	blood vessel:	n/a	n/a
47	CTCF	chr10:1339840-1339990	MCF-7	breast:	n/a	n/a
48	CTCF	chr10:1339860-1340010	GM12871	blood:	n/a	n/a
49	CTCF	chr10:1343550-1343568	GM10266	blood:	n/a	n/a
50	CTCF	chr10:1286040-1286190	SK-N-SH_RA	brain:	n/a	chr10:1286130-1286148 chr10:1286132-1286145

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr10:1383257-1383307	AoSMC	blood vessel:	n/a
2	chr10:1285535-1285585	PFSK-1	brain:	n/a
3	chr10:1308926-1308976	HCPEpiC	choroid plexus:	n/a
4	chr10:1334207-1334257	NT2-D1	testis:	n/a
5	chr10:1366415-1366465	HepG2	liver:	n/a
6	chr10:1308190-1308240	HNPCEpiC	eye:	n/a
7	chr10:1383257-1383307	AoSMC	blood vessel:	n/a
8	chr10:1285535-1285585	PFSK-1	brain:	n/a
9	chr10:1308926-1308976	HCPEpiC	choroid plexus:	n/a
10	chr10:1334207-1334257	NT2-D1	testis:	n/a
11	chr10:1366415-1366465	HepG2	liver:	n/a
12	chr10:1308190-1308240	HNPCEpiC	eye:	n/a
13	chr10:1384058-1384108	HCM	heart:	n/a
14	chr10:1286479-1286529	U87	brain:	n/a
15	chr10:1284421-1284471	NT2-D1	testis:	n/a
16	chr10:1370331-1370381	HRCEpiC	kidney:	n/a
17	chr10:1284161-1284211	GM19239	blood:	n/a
18	chr10:1383845-1383895	CMK	blood:	n/a
19	chr10:1369823-1369873	HEK293	kidney:	embryo
20	chr10:1308811-1308861	HCM	heart:	n/a
21	chr10:1369823-1369873	CMK	blood:	n/a
22	chr10:1370331-1370381	NB4	blood:	n/a
23	chr10:1386520-1386570	NH-A	brain:	n/a
24	chr10:1383623-1383673	NHDF-neo	bronchial:	n/a
25	chr10:1286668-1286718	AG09319	gingival:	n/a
26	chr10:1285332-1285382	HCPEpiC	choroid plexus:	n/a
27	chr10:1369114-1369164	SKMC	muscle:	n/a
28	chr10:1383257-1383307	BJ	skin:	n/a
29	chr10:1284421-1284471	H1-hESC	embryonic stem cell:	embryo
30	chr10:1308866-1308916	HAEpiC	amniotic membrane:	n/a
31	chr10:1384058-1384108	AG04449	skin:	fetal
32	chr10:1284242-1284292	HNPCEpiC	eye:	n/a
33	chr10:1285535-1285585	HMEC	breast:	n/a
34	chr10:1386520-1386570	NT2-D1	testis:	n/a
35	chr10:1307646-1307696	GM12892	blood:	n/a
36	chr10:1334207-1334257	NHDF-neo	bronchial:	n/a
37	chr10:1286479-1286529	HAEpiC	amniotic membrane:	n/a
38	chr10:1367612-1367662	HEK293	kidney:	embryo
39	chr10:1284161-1284211	HepG2	liver:	n/a
40	chr10:1285332-1285382	NT2-D1	testis:	n/a
41	chr10:1286479-1286529	LNCaP	prostate:	n/a
42	chr10:1308866-1308916	BJ	skin:	n/a
43	chr10:1383593-1383643	HRCEpiC	kidney:	n/a
44	chr10:1382783-1382833	Hela-S3	cervix:	n/a
45	chr10:1369823-1369873	Jurkat	blood:	n/a
46	chr10:1344504-1344554	Jurkat	blood:	n/a
47	chr10:1285332-1285382	LNCaP	prostate:	n/a
48	chr10:1382783-1382833	PFSK-1	brain:	n/a
49	chr10:1367612-1367662	A549	lung:	n/a
50	chr10:1378575-1378625	SK-N-SH	brain:	n/a

No.	Distal block	Cell Line	Cell type
1	chr10:1335815..1339939-chr10:1340197..1343625,5	MCF-7	breast:
2	chr10:1322383..1323906-chr10:1333565..1335622,2	MCF-7	breast:
3	chr10:1294262..1296961-chr10:1359732..1362708,2	K562	blood:
4	chr10:1337321..1341033-chr10:1341220..1344425,4	K562	blood:
5	chr10:1314496..1315373-chr11:128392405..128393112,2	NB4	blood:
6	chr10:1311192..1311778-chr10:1335511..1336108,2	MCF-7	breast:
7	chr10:1343525..1344053-chr10:2964654..2965501,2	MCF-7	breast:
8	chr10:1310639..1312545-chr10:1312590..1315231,2	MCF-7	breast:
9	chr10:1327021..1329202-chr10:1331499..1333339,2	MCF-7	breast:
10	chr10:1320866..1322423-chr10:1331411..1333358,2	MCF-7	breast:
11	chr10:1374021..1376725-chr10:1381732..1384192,2	MCF-7	breast:
12	chr10:1281009..1282976-chr10:1285216..1287322,2	MCF-7	breast:
13	chr10:1309664..1312515-chr10:1314750..1317873,3	K562	blood:
14	chr10:1335815..1339939-chr10:1340197..1343625,5	MCF-7	breast:
15	chr10:1343061..1343857-chr10:1429361..1429938,3	MCF-7	breast:
16	chr10:1351861..1353649-chr10:1354593..1356830,2	MCF-7	breast:
17	chr10:1327021..1329202-chr10:1331499..1333339,2	MCF-7	breast:
18	chr10:1326856..1329723-chr10:1336897..1339640,2	K562	blood:
19	chr10:1309664..1312515-chr10:1314750..1317873,3	K562	blood:
20	chr10:1352757..1355189-chr10:1359156..1361413,2	K562	blood:
21	chr10:1308964..1311362-chr10:1335460..1337376,2	MCF-7	breast:
22	chr10:1188239..1188928-chr10:1339469..1340337,2	MCF-7	breast:
23	chr10:1314917..1317483-chr10:1331482..1333713,2	MCF-7	breast:
24	chr10:1343104..1343866-chr10:1410880..1411791,3	MCF-7	breast:
25	chr10:1206544..1208143-chr10:1358833..1361339,2	K562	blood:
26	chr10:1369971..1371504-chr10:1375376..1377505,2	MCF-7	breast:
27	chr10:1155977..1157935-chr10:1333805..1335965,2	MCF-7	breast:
28	chr10:1311192..1311778-chr10:1335511..1336108,2	MCF-7	breast:
29	chr10:1308964..1311362-chr10:1335460..1337376,2	MCF-7	breast:
30	chr10:1294262..1296961-chr10:1359732..1362708,2	K562	blood:
31	chr10:1326145..1328602-chr10:1331091..1332912,2	K562	blood:
32	chr10:1369971..1371504-chr10:1375376..1377505,2	MCF-7	breast:
33	chr10:1314917..1317483-chr10:1331482..1333713,2	MCF-7	breast:
34	chr10:1326856..1329723-chr10:1336897..1339640,2	K562	blood:
35	chr10:1326145..1328602-chr10:1331091..1332912,2	K562	blood:
36	chr10:1310639..1312545-chr10:1312590..1315231,2	MCF-7	breast:
37	chr10:1322383..1323906-chr10:1333565..1335622,2	MCF-7	breast:
38	chr10:1320866..1322423-chr10:1331411..1333358,2	MCF-7	breast:
39	chr10:1351861..1353649-chr10:1354593..1356830,2	MCF-7	breast:
40	chr10:1352757..1355189-chr10:1359156..1361413,2	K562	blood:
41	chr10:1276796..1278904-chr10:1331020..1332895,2	MCF-7	breast:
42	chr10:1261061..1262909-chr10:1333610..1336037,2	MCF-7	breast:
43	chr10:1374021..1376725-chr10:1381732..1384192,2	MCF-7	breast:
44	chr10:1337321..1341033-chr10:1341220..1344425,4	K562	blood:
45	chr10:1367350..1368940-chr10:1404924..1406543,2	MCF-7	breast:

Variant related genes	Relation type
ADARB2	TF binding region
ADARB2	CpG island
ENSG00000185736	chromatin interactions

Extended variants
information (count: 4655 )
Associated
traits (count: 57 )

Variant overlapped rSNPs/rCNVs (count:4655 , 50 per page) page: 1 2 3 4 5 6 7 ... 94

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs566639513	chr10:1284044-1284045	Enhancers Genic enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs144684391	chr10:1284056-1284057	Enhancers Genic enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs529423431	chr10:1284101-1284102	Enhancers Genic enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs568813199	chr10:1284133-1284134	Enhancers Genic enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs537008110	chr10:1284154-1284155	Enhancers Genic enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs373332991	chr10:1284155-1284156	Enhancers Genic enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs371764681	chr10:1284158-1284159	Enhancers Genic enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs188160647	chr10:1284169-1284170	Enhancers Genic enhancers Weak transcription	CpG island	1 gene(s)	Overlapped CNVs	n/a
9	rs3750676	chr10:1284174-1284175	Enhancers Genic enhancers Weak transcription	CpG island	1 gene(s)	Overlapped CNVs	n/a
10	rs553223936	chr10:1284177-1284178	Enhancers Genic enhancers Weak transcription	CpG island	1 gene(s)	Overlapped CNVs	n/a
11	rs573377353	chr10:1284183-1284184	Enhancers Genic enhancers Weak transcription	CpG island	1 gene(s)	Overlapped CNVs	n/a
12	rs371194091	chr10:1284187-1284188	Enhancers Genic enhancers Weak transcription	CpG island	1 gene(s)	Overlapped CNVs	n/a
13	rs111944117	chr10:1284188-1284189	Enhancers Genic enhancers Weak transcription	CpG island	1 gene(s)	Overlapped CNVs	n/a
14	rs139572548	chr10:1284214-1284215	Enhancers Genic enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs142949222	chr10:1284228-1284229	Enhancers Genic enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs200709380	chr10:1284236-1284237	Enhancers Genic enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs201639089	chr10:1284249-1284250	Enhancers Genic enhancers Weak transcription	CpG island	1 gene(s)	Overlapped CNVs	n/a
18	rs370299598	chr10:1284256-1284257	Enhancers Genic enhancers Weak transcription	CpG island	1 gene(s)	Overlapped CNVs	n/a
19	rs374032478	chr10:1284300-1284301	Enhancers Genic enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs560961575	chr10:1284301-1284302	Enhancers Genic enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs146452150	chr10:1284303-1284304	Enhancers Genic enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs183812854	chr10:1284304-1284305	Enhancers Genic enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs11250353	chr10:1284305-1284306	Enhancers Genic enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs200534087	chr10:1284336-1284337	Enhancers Genic enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs371856728	chr10:1284337-1284338	Enhancers Genic enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs112668147	chr10:1284344-1284345	Enhancers Genic enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs140915343	chr10:1284349-1284350	Enhancers Genic enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs551961865	chr10:1284355-1284356	Enhancers Genic enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs538734059	chr10:1284357-1284358	Enhancers Genic enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs537767766	chr10:1284359-1284360	Enhancers Genic enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs373772315	chr10:1284390-1284391	Enhancers Genic enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs146596278	chr10:1284391-1284392	Enhancers Genic enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs567634396	chr10:1284399-1284400	Enhancers Genic enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs562151051	chr10:1284403-1284404	Enhancers Genic enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs111637007	chr10:1284406-1284407	Enhancers Genic enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs142418127	chr10:1284407-1284408	Enhancers Genic enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs113690732	chr10:1284418-1284419	Enhancers Genic enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs200879760	chr10:1284420-1284421	Enhancers Genic enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs573260320	chr10:1284421-1284422	Enhancers Genic enhancers Weak transcription	CpG island	1 gene(s)	Overlapped CNVs	n/a
40	rs539194971	chr10:1284441-1284442	Enhancers Genic enhancers Weak transcription	CpG island	1 gene(s)	Overlapped CNVs	n/a
41	rs186735303	chr10:1284447-1284448	Enhancers Genic enhancers Weak transcription	CpG island	1 gene(s)	Overlapped CNVs	n/a
42	rs575982828	chr10:1284454-1284455	Enhancers Genic enhancers Weak transcription	CpG island	1 gene(s)	Overlapped CNVs	n/a
43	rs544900862	chr10:1284482-1284483	Enhancers Genic enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs561462024	chr10:1284489-1284490	Enhancers Genic enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs574369158	chr10:1284517-1284518	Enhancers Genic enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs370954291	chr10:1284521-1284522	Enhancers Genic enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs11250354	chr10:1284543-1284544	Enhancers Genic enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs539848870	chr10:1284558-1284559	Enhancers Genic enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs560150003	chr10:1284560-1284561	Enhancers Genic enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs532090303	chr10:1284580-1284581	Enhancers Genic enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:57)

Disease	PMID	Source
Myelofibrosis	22110671	CNVD
Breast cancer	20409316	CNVD
Gastric adenocarcinoma	19115996	CNVD
Pilocytic astrocytoma	18622384	CNVD
Pilomyxoid astrocytoma	18622384	CNVD
Breast cancer	17133270	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Cancer	21129771	CNVD
Sudden cardiac death	19188705	CNVD
Digeorge syndrome	22283845	CNVD
Colorectal cancer	20709793	CNVD
Wilms tumour	19047088	CNVD
Hepatocellular carcinoma	16750200	CNVD
Acute myeloid leukemia	16864856	CNVD
Cancer	21183584	CNVD
Barakat syndrome	22470819	CNVD
Melanoma	18172304	CNVD
Ovarian cancer	21720365	CNVD
Autism	18414403	CNVD
Malignant melanoma	18718029	CNVD
Breast cancer	22032731	CNVD
Medulloblastoma	16783165	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Breast cancer	17603634	CNVD
Endometrial cancer	22040021	CNVD
Glioblastoma multiforme	21080181	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Phyllodes tumor	17334353	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Pancreatic endocrine tumor	17639061	CNVD
Gastric cancer	17908304	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Medulloblastoma	21979893	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Melanoma	17363583	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Ewing''s sarcoma	17952124	CNVD
Oral cancer	21386901	CNVD
Breast cancer	21785460	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Breast cancer	21509527	CNVD
Prostate cancer	18632612	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21858162	CNVD
Breast cancer	21364760	CNVD
Acute lymphoblastic leukemia	20724749	CNVD
Autism	22495311	CNVD
Autism	22543975	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD

Chromatin state (count:718 , 50 per page) page: 1 2 3 4 5 6 7 ... 15

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:1281800-1287800	Weak transcription	Right Atrium	heart
2	chr10:1282600-1284200	Enhancers	Primary hematopoietic stem cells	blood
3	chr10:1282800-1284600	Genic enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
4	chr10:1283000-1286400	Enhancers	HUES6 Cell Line	embryonic stem cell
5	chr10:1284000-1284400	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
6	chr10:1284400-1284800	Enhancers	Primary T killer naive cells fromperipheralblood	blood
7	chr10:1284600-1284800	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
8	chr10:1284800-1285800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
9	chr10:1285000-1285200	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
10	chr10:1285000-1285200	Enhancers	iPS-20b Cell Line	embryonic stem cell
11	chr10:1285200-1286000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
12	chr10:1285600-1285800	Bivalent Enhancer	Foreskin Melanocyte Primary Cells skin01	Skin
13	chr10:1285600-1286800	Bivalent Enhancer	Fetal Adrenal Gland	Adrenal Gland
14	chr10:1285800-1286000	Enhancers	Brain Hippocampus Middle	brain
15	chr10:1285800-1286400	Enhancers	ES-I3 Cell Line	embryonic stem cell
16	chr10:1285800-1287000	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
17	chr10:1286000-1286200	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
18	chr10:1286600-1287200	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
19	chr10:1287000-1287200	Bivalent Enhancer	Left Ventricle	heart
20	chr10:1287000-1290000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
21	chr10:1290000-1290400	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
22	chr10:1290000-1290400	ZNF genes & repeats	Lung	lung
23	chr10:1290000-1290600	Bivalent Enhancer	H1 Derived Mesenchymal Stem Cells	ES cell derived
24	chr10:1290000-1290600	Enhancers	Pancreas	Pancrea
25	chr10:1290000-1290600	Enhancers	Spleen	Spleen
26	chr10:1290000-1290800	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Female	--
27	chr10:1290000-1290800	Bivalent Enhancer	Fetal Adrenal Gland	Adrenal Gland
28	chr10:1290200-1290800	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Male	--
29	chr10:1290200-1292000	Enhancers	Primary neutrophils fromperipheralblood	blood
30	chr10:1290400-1291200	Bivalent Enhancer	Primary hematopoietic stem cells	blood
31	chr10:1290400-1299400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
32	chr10:1290600-1290800	Enhancers	Brain Hippocampus Middle	brain
33	chr10:1290600-1291200	Weak transcription	Pancreas	Pancrea
34	chr10:1290600-1296000	Weak transcription	Spleen	Spleen
35	chr10:1290800-1291200	Enhancers	Primary B cells from cord blood	blood
36	chr10:1290800-1297000	Weak transcription	Brain Hippocampus Middle	brain
37	chr10:1292000-1293800	Weak transcription	Primary neutrophils fromperipheralblood	blood
38	chr10:1293800-1294000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
39	chr10:1293800-1296600	Enhancers	Primary neutrophils fromperipheralblood	blood
40	chr10:1294400-1294600	Enhancers	Primary T helper cells PMA-I stimulated	--
41	chr10:1294600-1294800	Enhancers	Primary T helper naive cells from peripheral blood	blood
42	chr10:1294800-1295600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
43	chr10:1294800-1295800	Weak transcription	Primary T helper cells PMA-I stimulated	--
44	chr10:1294800-1296000	Enhancers	Brain Cingulate Gyrus	brain
45	chr10:1295000-1296000	Weak transcription	Primary T helper naive cells from peripheral blood	blood
46	chr10:1295600-1295800	Enhancers	Brain Substantia Nigra	brain
47	chr10:1295600-1296800	ZNF genes & repeats	Primary Natural Killer cells fromperipheralblood	blood
48	chr10:1295800-1296400	Enhancers	Pancreas	Pancrea
49	chr10:1295800-1297000	Weak transcription	Brain Substantia Nigra	brain
50	chr10:1295800-1298400	Bivalent Enhancer	Primary hematopoietic stem cells	blood

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links