Variant report

Variant	nsv540744
Chromosome Location	chr10:92095431-92548184
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:2592)
CpG islands
(count:489)
Chromatin interactive
region (count:52)
LncRNA
region (count:52)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:2592 , 50 per page) page: 1 2 3 4 5 6 7 ... 52

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr10:92547727-92547927	HepG2	liver:	n/a	n/a
2	ARID3A	chr10:92547661-92547976	K562	blood:	n/a	n/a
3	ATF2	chr10:92180364-92180842	GM12878	blood:	n/a	n/a
4	ATF2	chr10:92492304-92492749	GM12878	blood:	n/a	n/a
5	ATF3	chr10:92539382-92539620	K562	blood:	n/a	n/a
6	ATF3	chr10:92539348-92539659	GM12878	blood:	n/a	n/a
7	BACH1	chr10:92388133-92388292	H1-hESC	embryonic stem cell:	n/a	n/a
8	BACH1	chr10:92184912-92184933	H1-hESC	embryonic stem cell:	n/a	n/a
9	BACH1	chr10:92537699-92537707	H1-hESC	embryonic stem cell:	n/a	n/a
10	BATF	chr10:92180389-92180682	GM12878	blood:	n/a	n/a
11	BATF	chr10:92505731-92505928	GM12878	blood:	n/a	n/a
12	BATF	chr10:92180437-92180697	GM12878	blood:	n/a	n/a
13	BATF	chr10:92492326-92492718	GM12878	blood:	n/a	n/a
14	BATF	chr10:92492406-92492747	GM12878	blood:	n/a	n/a
15	BCL11A	chr10:92123906-92124192	H1-hESC	embryonic stem cell:	n/a	n/a
16	BCL11A	chr10:92180396-92180743	GM12878	blood:	n/a	n/a
17	BCL11A	chr10:92180394-92180720	GM12878	blood:	n/a	n/a
18	BCL11A	chr10:92535135-92535366	GM12878	blood:	n/a	n/a
19	BCL3	chr10:92140213-92140457	GM12878	blood:	n/a	n/a
20	BHLHE40	chr10:92511289-92511317	K562	blood:	n/a	n/a
21	BHLHE40	chr10:92112120-92112285	GM12878	blood:	n/a	n/a
22	BHLHE40	chr10:92197207-92197414	GM12878	blood:	n/a	n/a
23	BHLHE40	chr10:92492381-92492717	GM12878	blood:	n/a	n/a
24	BHLHE40	chr10:92511235-92511397	GM12878	blood:	n/a	n/a
25	BHLHE40	chr10:92539360-92539757	K562	blood:	n/a	n/a
26	BHLHE40	chr10:92547746-92547983	GM12878	blood:	n/a	n/a
27	BRCA1	chr10:92511184-92511518	Hela-S3	cervix:	n/a	n/a
28	BRCA1	chr10:92492627-92492628	Hela-S3	cervix:	n/a	n/a
29	CBX3	chr10:92339367-92340016	HCT-116	colon:	n/a	n/a
30	CBX3	chr10:92346380-92348452	HCT-116	colon:	n/a	n/a
31	CBX3	chr10:92339282-92340123	HCT-116	colon:	n/a	n/a
32	CBX3	chr10:92166724-92167371	HCT-116	colon:	n/a	n/a
33	CBX3	chr10:92210988-92211708	HCT-116	colon:	n/a	n/a
34	CBX3	chr10:92346576-92347631	HCT-116	colon:	n/a	n/a
35	CEBPB	chr10:92485157-92485357	HepG2	liver:	n/a	n/a
36	CEBPB	chr10:92482142-92482403	HepG2	liver:	n/a	chr10:92482350-92482361
37	CEBPB	chr10:92396853-92397053	A549	lung:	n/a	n/a
38	CEBPB	chr10:92346504-92347497	HCT-116	colon:	n/a	n/a
39	CEBPB	chr10:92166813-92167244	MCF-7	breast:	n/a	n/a
40	CEBPB	chr10:92446252-92446296	H1-hESC	embryonic stem cell:	n/a	n/a
41	CEBPB	chr10:92176747-92177351	MCF-7	breast:	n/a	chr10:92176960-92176971
42	CEBPB	chr10:92178664-92179543	IMR90	lung:	n/a	chr10:92179492-92179503
43	CEBPB	chr10:92346495-92347641	HCT-116	colon:	n/a	n/a
44	CEBPB	chr10:92482251-92482406	K562	blood:	n/a	chr10:92482350-92482361
45	CEBPB	chr10:92428592-92428716	IMR90	lung:	n/a	n/a
46	CEBPB	chr10:92176813-92177155	HepG2	liver:	n/a	chr10:92176960-92176971
47	CEBPB	chr10:92123619-92123868	HepG2	liver:	n/a	chr10:92123748-92123759
48	CEBPB	chr10:92482608-92482944	H1-hESC	embryonic stem cell:	n/a	chr10:92482778-92482789
49	CEBPB	chr10:92482636-92482947	A549	lung:	n/a	chr10:92482778-92482789
50	CEBPB	chr10:92539359-92539668	IMR90	lung:	n/a	chr10:92539496-92539507

(count:489 , 50 per page) page: 1 2 3 4 5 6 7 ... 10

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr10:92501798-92501848	BJ	skin:	n/a
2	chr10:92501798-92501848	BJ	skin:	n/a
3	chr10:92501798-92501848	HEEpiC	esophagus:	n/a
4	chr10:92213236-92213286	MCF10A-Er-Src	breast:	n/a
5	chr10:92484088-92484138	NT2-D1	testis:	n/a
6	chr10:92501798-92501848	SK-N-SH	brain:	n/a
7	chr10:92123669-92123719	PFSK-1	brain:	n/a
8	chr10:92484088-92484138	HCF	heart:	n/a
9	chr10:92213236-92213286	HIPEpiC	eye:	n/a
10	chr10:92153495-92153545	HRPEpiC	eye:	n/a
11	chr10:92501798-92501848	HNPCEpiC	eye:	n/a
12	chr10:92123669-92123719	HCT-116	colon:	n/a
13	chr10:92123669-92123719	AG04449	skin:	fetal
14	chr10:92213389-92213439	AG10803	skin:	n/a
15	chr10:92493105-92493155	GM19239	blood:	n/a
16	chr10:92395206-92395256	U87	brain:	n/a
17	chr10:92493105-92493155	H1-hESC	embryonic stem cell:	embryo
18	chr10:92213236-92213286	GM12878	blood:	n/a
19	chr10:92493105-92493155	HCT-116	colon:	n/a
20	chr10:92493105-92493155	AG09319	gingival:	n/a
21	chr10:92395206-92395256	H1-hESC	embryonic stem cell:	embryo
22	chr10:92213389-92213439	HRE	kidney:	n/a
23	chr10:92153495-92153545	HCPEpiC	choroid plexus:	n/a
24	chr10:92484088-92484138	ECC-1	luminal epithelium:	n/a
25	chr10:92395206-92395256	GM12891	blood:	n/a
26	chr10:92501798-92501848	SK-N-SH_RA	brain:	n/a
27	chr10:92395206-92395256	HPAEpiC	pulmonary alveolar:	n/a
28	chr10:92501798-92501848	HUVEC	blood vessel:	n/a
29	chr10:92213389-92213439	K562	blood:	n/a
30	chr10:92484088-92484138	U87	brain:	n/a
31	chr10:92123669-92123719	AG10803	skin:	n/a
32	chr10:92484088-92484138	HEEpiC	esophagus:	n/a
33	chr10:92153495-92153545	GM12892	blood:	n/a
34	chr10:92484088-92484138	HCM	heart:	n/a
35	chr10:92123669-92123719	GM12891	blood:	n/a
36	chr10:92484088-92484138	AG09319	gingival:	n/a
37	chr10:92501798-92501848	K562	blood:	n/a
38	chr10:92493105-92493155	MCF-7	breast:	n/a
39	chr10:92395206-92395256	ProgFib	skin:	n/a
40	chr10:92493105-92493155	BE2_C	brain:	n/a
41	chr10:92213389-92213439	AG04450	lung:	fetal
42	chr10:92153495-92153545	SK-N-SH_RA	brain:	n/a
43	chr10:92501798-92501848	HAEpiC	amniotic membrane:	n/a
44	chr10:92213389-92213439	Hepatocyte	liver:	n/a
45	chr10:92484088-92484138	HPAEpiC	pulmonary alveolar:	n/a
46	chr10:92153495-92153545	NT2-D1	testis:	n/a
47	chr10:92395206-92395256	SK-N-SH_RA	brain:	n/a
48	chr10:92123669-92123719	ECC-1	luminal epithelium:	n/a
49	chr10:92484088-92484138	SK-N-MC	brain:	n/a
50	chr10:92395206-92395256	PANC-1	pancreas:	n/a

(count:52 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr10:91908029..91908801-chr10:92352406..92353300,3	MCF-7	breast:
2	chr10:92510904..92511887-chr10:92547546..92548208,2	MCF-7	breast:
3	chr10:92047473..92050346-chr10:92165247..92168101,3	MCF-7	breast:
4	chr10:92254197..92256394-chr10:92257440..92260010,2	MCF-7	breast:
5	chr10:92255876..92258347-chr10:92261128..92263614,2	MCF-7	breast:
6	chr10:91908033..91909093-chr10:92411955..92412824,3	MCF-7	breast:
7	chr10:92248193..92249705-chr10:92254263..92256644,2	MCF-7	breast:
8	chr10:92272442..92274509-chr10:92335877..92337780,2	MCF-7	breast:
9	chr10:92513228..92514172-chr10:92622355..92622930,2	MCF-7	breast:
10	chr10:92254197..92256394-chr10:92257440..92260010,2	MCF-7	breast:
11	chr10:92272442..92274509-chr10:92335877..92337780,2	MCF-7	breast:
12	chr10:92510904..92511887-chr10:92547546..92548208,2	MCF-7	breast:
13	chr10:92184835..92186685-chr10:92187388..92189622,2	MCF-7	breast:
14	chr10:91553209..91554089-chr10:92418302..92419167,2	MCF-7	breast:
15	chr10:92255876..92258347-chr10:92261128..92263614,2	MCF-7	breast:
16	chr10:92510876..92511819-chr10:92622380..92623098,6	K562	blood:
17	chr10:92481423..92483084-chr10:92487881..92490000,2	MCF-7	breast:
18	chr10:92437999..92438515-chr10:92472507..92473297,2	MCF-7	breast:
19	chr10:92481423..92483084-chr10:92487881..92490000,2	MCF-7	breast:
20	chr10:92501868..92504163-chr10:92504475..92507268,2	K562	blood:
21	chr10:92458548..92460592-chr10:92463016..92464897,2	K562	blood:
22	chr10:92547332..92548353-chr10:92622125..92623330,4	MCF-7	breast:
23	chr10:91908037..91908636-chr10:92339006..92340002,2	MCF-7	breast:
24	chr10:92458548..92460592-chr10:92463016..92464897,2	K562	blood:
25	chr10:92048060..92049321-chr10:92352261..92353257,6	MCF-7	breast:
26	chr10:92437999..92438515-chr10:92472507..92473297,2	MCF-7	breast:
27	chr10:92539122..92539997-chr10:92622412..92623352,3	K562	blood:
28	chr10:92248193..92249705-chr10:92254263..92256644,2	MCF-7	breast:
29	chr10:92543492..92547102-chr10:92549705..92553165,3	K562	blood:
30	chr10:92547996..92549557-chr10:92549602..92552195,2	K562	blood:
31	chr10:92510777..92511813-chr10:92622355..92623374,9	MCF-7	breast:
32	chr10:92177056..92178628-chr10:92179037..92181377,2	MCF-7	breast:
33	chr10:92197334..92197860-chr10:92338992..92339734,2	MCF-7	breast:
34	chr10:92047856..92048792-chr10:92412267..92413265,3	MCF-7	breast:
35	chr10:91553518..91554066-chr10:92352389..92353153,2	MCF-7	breast:
36	chr10:92184835..92186685-chr10:92187388..92189622,2	MCF-7	breast:
37	chr10:92197334..92197860-chr10:92338992..92339734,2	MCF-7	breast:
38	chr10:92510928..92512332-chr10:92630672..92631466,5	MCF-7	breast:
39	chr10:91585659..91588157-chr10:92199771..92201481,2	MCF-7	breast:
40	chr10:92196966..92197656-chr10:92339492..92340259,2	MCF-7	breast:
41	chr10:92511236..92511850-chr10:92630669..92631482,2	K562	blood:
42	chr10:92177056..92178628-chr10:92179037..92181377,2	MCF-7	breast:
43	chr10:92264610..92266324-chr17:57922453..57924071,2	MCF-7	breast:
44	chr10:92501868..92504163-chr10:92504475..92507268,2	K562	blood:
45	chr10:92510841..92511818-chr10:92622320..92623307,5	MCF-7	breast:
46	chr10:92046589..92049031-chr10:92410934..92413664,2	MCF-7	breast:
47	chr10:92196966..92197656-chr10:92339492..92340259,2	MCF-7	breast:
48	chr10:92051318..92054074-chr10:92099394..92101764,2	MCF-7	breast:
49	chr10:92387383..92387883-chrX:34116231..34116845,2	MCF-7	breast:
50	chr10:92064760..92066679-chr10:92166883..92168806,2	MCF-7	breast:

(count:52 , 50 per page) page: 1 2

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-HTR7-2	chr10:92201417-92201570	NONHSAT015585
2	lnc-RPP30-10	chr10:92280349-92280853	NONHSAT015590
3	lnc-RPP30-10	chr10:92235756-92235809	ucscGeneNc_uc001kgy_2
4	lnc-RPP30-6	chr10:92290369-92290873	XLOC_008556
5	lnc-RPP30-10	chr10:92210509-92211238	NONHSAT015588
6	lnc-RPP30-6	chr10:92245776-92245829	XLOC_008556
7	lnc-HTR7-2	chr10:92277011-92277176	NONHSAT015585
8	lnc-RPP30-6	chr10:92213926-92214072	XLOC_008556
9	lnc-RPP30-6	chr10:92214437-92214580	XLOC_008556
10	lnc-RPP30-9	chr10:92212454-92213123	NONHSAT015591
11	lnc-HTR7-1	chr10:92166207-92166352	XLOC_008901
12	lnc-RPP30-10	chr10:92203906-92204052	ucscGeneNc_uc001kgy_2
13	lnc-RPP30-6	chr10:92245776-92245829	XLOC_008556
14	lnc-HTR7-1	chr10:92162711-92162796	XLOC_008901
15	lnc-RPP30-10	chr10:92204435-92204560	NONHSAT015590
16	lnc-RPP30-10	chr10:92249010-92251177	NONHSAT015587
17	lnc-RPP30-6	chr10:92214455-92214580	XLOC_008556
18	lnc-RPP30-9	chr10:92215653-92215725	NONHSAT015591
19	lnc-RPP30-9	chr10:92217602-92217689	NONHSAT015591
20	lnc-RPP30-6	chr10:92259030-92261192	XLOC_008556
21	lnc-RPP30-6	chr10:92259030-92261197	ENSG00000224750
22	lnc-RPP30-10	chr10:92204417-92204560	NONHSAT015588
23	lnc-HTR7-2	chr10:92156187-92156332	NONHSAT015585
24	lnc-RPP30-10	chr10:92235756-92235809	NONHSAT015587
25	lnc-HTR7-1	chr10:92211437-92211590	XLOC_008901
26	lnc-RPP30-6	chr10:92262543-92262725	XLOC_008556
27	lnc-RPP30-6	chr10:92259030-92259128	XLOC_008556
28	lnc-HTR7-1	chr10:92300489-92300562	XLOC_008901
29	lnc-HTR7-1	chr10:92163745-92163811	XLOC_008901
30	lnc-RPP30-10	chr10:92235756-92235809	NONHSAT015589
31	lnc-RPP30-10	chr10:92249010-92251172	ucscGeneNc_uc001kgy_2
32	lnc-HTR7-2	chr10:92152258-92152545	NONHSAT015585
33	lnc-RPP30-6	chr10:92245776-92245829	XLOC_008556
34	lnc-RPP30-5	chr10:92225673-92225745	XLOC_008557
35	lnc-RPP30-5	chr10:92222474-92223143	XLOC_008557
36	lnc-RPP30-10	chr10:92249010-92249108	NONHSAT015590
37	lnc-RPP30-6	chr10:92220529-92221258	XLOC_008556
38	lnc-RPP30-10	chr10:92249010-92249108	NONHSAT015589
39	lnc-RPP30-6	chr10:92213927-92214072	ENSG00000224750
40	lnc-HTR7-2	chr10:92153725-92153791	NONHSAT015585
41	lnc-RPP30-10	chr10:92203907-92204052	NONHSAT015587
42	lnc-RPP30-6	chr10:92245776-92245829	ENSG00000224750
43	lnc-RPP30-5	chr10:92227622-92227709	XLOC_008557
44	lnc-HTR7-1	chr10:92287031-92287196	XLOC_008901
45	lnc-HTR7-2	chr10:92290469-92290542	NONHSAT015585
46	lnc-RPP30-6	chr10:92214455-92214580	XLOC_008556
47	lnc-HTR7-2	chr10:92152691-92152776	NONHSAT015585
48	lnc-HTR7-1	chr10:92162278-92162565	XLOC_008901
49	lnc-RPP30-10	chr10:92204435-92204560	NONHSAT015589
50	lnc-RPP30-10	chr10:92235756-92235809	NONHSAT015590

No data

Variant related genes	Relation type
ENSG00000236373	TF binding region
ENSG00000238291	TF binding region
ENSG00000224750	TF binding region
ENSG00000236373	CpG island
ENSG00000238291	CpG island
ENSG00000224750	CpG island
ENSG00000148688	chromatin interactions
BCL11B	miRNA target sites
MLL3	miRNA target sites
MLL2	miRNA target sites

Extended variants
information (count: 12185 )
Associated
traits (count: 89 )

Variant overlapped rSNPs/rCNVs (count:12185 , 50 per page) page: 1 2 3 4 5 6 7 ... 244

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs376579964	chr10:92095436-92095437	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs187260564	chr10:92095440-92095441	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs143738631	chr10:92095447-92095448	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs570967807	chr10:92095450-92095451	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs554697253	chr10:92095500-92095501	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs191892041	chr10:92095619-92095620	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs138738807	chr10:92095629-92095630	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs547514027	chr10:92095642-92095643	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs12571183	chr10:92095665-92095666	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
10	rs553915324	chr10:92095681-92095682	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs11186132	chr10:92095687-92095688	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
12	rs12570069	chr10:92095705-92095706	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
13	rs386746447	chr10:92095753-92095754	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs78726621	chr10:92095755-92095756	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs559147071	chr10:92095771-92095772	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs182993402	chr10:92095772-92095773	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs80230774	chr10:92095804-92095805	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs12571204	chr10:92095819-92095820	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
19	rs563596583	chr10:92095882-92095883	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs181294841	chr10:92095898-92095899	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs187325365	chr10:92095964-92095965	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs561466814	chr10:92095966-92095967	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs12571236	chr10:92096154-92096155	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
24	rs561028389	chr10:92096171-92096172	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs543819178	chr10:92096182-92096183	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs563603474	chr10:92096185-92096186	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs12570105	chr10:92096195-92096196	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
28	rs72413774	chr10:92096235-92096236	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs34265823	chr10:92096236-92096237	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs78086425	chr10:92096259-92096260	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs147985306	chr10:92096291-92096292	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs191862373	chr10:92096336-92096337	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs371855793	chr10:92096348-92096349	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs182369515	chr10:92096372-92096373	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs187655165	chr10:92096373-92096374	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs113355825	chr10:92096387-92096388	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs192629189	chr10:92096388-92096389	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs12572364	chr10:92096395-92096396	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
39	rs538933171	chr10:92096396-92096397	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs558934776	chr10:92096463-92096464	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs576293779	chr10:92096500-92096501	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs543241422	chr10:92096501-92096502	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs114974264	chr10:92096505-92096506	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs534846643	chr10:92096509-92096510	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs554736884	chr10:92096511-92096512	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs150168176	chr10:92096556-92096557	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs532476521	chr10:92096580-92096581	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs543409246	chr10:92096589-92096590	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs74148561	chr10:92096629-92096630	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
50	rs112692423	chr10:92096664-92096665	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:89)

Disease	PMID	Source
Gastric cancer	17908304	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Medulloblastoma	21979893	CNVD
Melanoma	18172304	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Ewing''s sarcoma	17952124	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	20724749	CNVD
Autism	22495311	CNVD
Prostate cancer	18632612	CNVD
Cockayne syndrome	18421352	CNVD
Glioblastoma	16823260	CNVD
Medulloblastoma	16968546	CNVD
Neuroblastoma	17533364	CNVD
Squamous cell cancer	21044232	CNVD
Glioma	21971842	CNVD
Cancer	21637783	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Colorectal cancer	20709793	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Liposarcoma	21253554	CNVD
Oligodendroglial tumors	17285580	CNVD
Lung cancer	18438408	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Usher syndrome	20538994	CNVD
Medulloblastoma	16783165	CNVD
Breast cancer	21785460	CNVD
Acute myeloid leukemia	20729466	CNVD
Prostate cancer	16573809	CNVD
Paraganglioma	17535989	CNVD
Submicroscopic aberration syndrome	21292638	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Pancreatic endocrine tumor	17639061	CNVD
Pulmonary chondroma	17535989	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Colorectal cancer	18645599	CNVD
Polyposis syndrome	18645599	CNVD
Prostate cancer	17245344	CNVD
Glioblastoma multiforme	17369134	CNVD
Glioblastoma multiforme	21750150	CNVD
Breast cancer	22032731	CNVD
Ovarian cancer	20844748	CNVD
Glioblastoma multiforme	17002787	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	17603634	CNVD
Glioblastoma multiforme	17387387	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Breast cancer	21364760	CNVD
T-cell acute lymphoblastic leukemia	19406988	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Wilms tumour	21544195	CNVD
small cell lung cancer	20016488	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Urothelial carcinoma	21177765	CNVD
Esophageal adenocarcinoma	18519675	CNVD
Colorectal cancer	19359472	CNVD
Neurocytoma	17123091	CNVD
Prostate cancer	16461572	CNVD
Basal-like breast cancer	18066063	CNVD
Effusion lymphoma	18079361	CNVD
Lung cancer	21911935	CNVD
Myelofibrosis	22110671	CNVD
Prostate cancer	21088497	CNVD
Breast cancer	22048815	CNVD
Cutaneous T-cell lymphoma	21881587	CNVD
Glioblastoma multiforme	22291905	CNVD
Glioblastoma multiforme	19435819	CNVD
Glioblastoma multiforme	22286061	CNVD
Intracranial ependymoma	16609018	CNVD
Breast cancer	16397240	CNVD
Chronic lymphocytic leukemia	21049055	CNVD
Cervical cancer	21062161	CNVD
Non-small cell lung cancer	21829676	CNVD
Melanoma	24453001	CNVD
Breast cancer	16608533	CNVD
Sezary syndrome	18413736	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Cancer	20164919	CNVD
Pancreatic cancer	17952125	CNVD

Chromatin state (count:1083 , 50 per page) page: 1 2 3 4 5 6 7 ... 22

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:92092400-92101400	Weak transcription	Aorta	Aorta
2	chr10:92097000-92097400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr10:92101400-92101600	Enhancers	Aorta	Aorta
4	chr10:92103000-92103200	Enhancers	iPS-15b Cell Line	embryonic stem cell
5	chr10:92103000-92103600	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
6	chr10:92103000-92104600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
7	chr10:92103200-92104000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
8	chr10:92103400-92103800	Enhancers	H1 Cell Line	embryonic stem cell
9	chr10:92103800-92104600	Enhancers	HUES48 Cell Line	embryonic stem cell
10	chr10:92104000-92104200	Enhancers	iPS-15b Cell Line	embryonic stem cell
11	chr10:92104000-92104400	Enhancers	HUES64 Cell Line	embryonic stem cell
12	chr10:92104000-92104400	Enhancers	iPS-18 Cell Line	embryonic stem cell
13	chr10:92104200-92105000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
14	chr10:92104600-92107400	Weak transcription	HUES48 Cell Line	embryonic stem cell
15	chr10:92105000-92105200	Enhancers	iPS-15b Cell Line	embryonic stem cell
16	chr10:92105200-92107600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
17	chr10:92106600-92107200	Enhancers	ES-I3 Cell Line	embryonic stem cell
18	chr10:92106600-92107800	Enhancers	Muscle Satellite Cultured Cells	--
19	chr10:92106800-92107200	Enhancers	HUES6 Cell Line	embryonic stem cell
20	chr10:92106800-92108400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
21	chr10:92107000-92107600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
22	chr10:92107000-92107600	Enhancers	Osteobl	bone
23	chr10:92107000-92108200	Enhancers	HMEC	breast
24	chr10:92107400-92108000	Enhancers	HUES48 Cell Line	embryonic stem cell
25	chr10:92107400-92108200	Enhancers	NHEK	skin
26	chr10:92107800-92108000	Enhancers	iPS-15b Cell Line	embryonic stem cell
27	chr10:92107800-92108000	Bivalent Enhancer	Muscle Satellite Cultured Cells	--
28	chr10:92107800-92108200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
29	chr10:92112200-92112400	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
30	chr10:92112200-92112600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
31	chr10:92112600-92114200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
32	chr10:92112600-92114800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
33	chr10:92114800-92115400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
34	chr10:92115400-92143200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
35	chr10:92117800-92119000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
36	chr10:92118000-92119200	Enhancers	NHEK	skin
37	chr10:92118200-92119000	Enhancers	HMEC	breast
38	chr10:92118600-92119200	Enhancers	Breast Myoepithelial Primary Cells	Breast
39	chr10:92121800-92122000	Enhancers	HUVEC	blood vessel
40	chr10:92122400-92123600	Enhancers	HUES48 Cell Line	embryonic stem cell
41	chr10:92122400-92123800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
42	chr10:92122800-92123400	Enhancers	iPS-18 Cell Line	embryonic stem cell
43	chr10:92122800-92123400	Enhancers	iPS-20b Cell Line	embryonic stem cell
44	chr10:92122800-92125000	Enhancers	HUES64 Cell Line	embryonic stem cell
45	chr10:92122800-92125400	Enhancers	iPS-15b Cell Line	embryonic stem cell
46	chr10:92123200-92124000	Enhancers	ES-WA7 Cell Line	embryonic stem cell
47	chr10:92123400-92123600	Enhancers	HUES6 Cell Line	embryonic stem cell
48	chr10:92123400-92124000	Enhancers	H1 Cell Line	embryonic stem cell
49	chr10:92123400-92124000	Enhancers	H9 Cell Line	embryonic stem cell
50	chr10:92123400-92124000	Flanking Active TSS	iPS-20b Cell Line	embryonic stem cell

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