Variant report

Variant	nsv540997
Chromosome Location	chr11:33249367-33637249
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:3968)
CpG islands
(count:2933)
Chromatin interactive
region (count:258)
LncRNA
region (count:4)
Mature miRNA
region (count: 0)
miRNA target
sites (count:14)

(count:3968 , 50 per page) page: 1 2 3 4 5 6 7 ... 80

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr11:33280804-33281150	K562	blood:	n/a	n/a
2	ARID3A	chr11:33288174-33288395	K562	blood:	n/a	n/a
3	ARID3A	chr11:33288039-33288460	HepG2	liver:	n/a	n/a
4	ARID3A	chr11:33277822-33278022	HepG2	liver:	n/a	n/a
5	ARID3A	chr11:33280061-33280282	K562	blood:	n/a	n/a
6	ARID3A	chr11:33383925-33384254	HepG2	liver:	n/a	n/a
7	ARID3A	chr11:33351286-33351649	K562	blood:	n/a	n/a
8	ARID3A	chr11:33278760-33279150	HepG2	liver:	n/a	n/a
9	ARID3A	chr11:33383912-33384198	K562	blood:	n/a	n/a
10	ARID3A	chr11:33394101-33394301	HepG2	liver:	n/a	n/a
11	ARID3A	chr11:33467294-33467606	HepG2	liver:	n/a	n/a
12	ARID3A	chr11:33342559-33342940	K562	blood:	n/a	n/a
13	ARID3A	chr11:33529658-33529797	K562	blood:	n/a	n/a
14	ARID3A	chr11:33280884-33281018	HepG2	liver:	n/a	n/a
15	ARID3A	chr11:33364523-33364723	K562	blood:	n/a	n/a
16	ARID3A	chr11:33351288-33351628	HepG2	liver:	n/a	n/a
17	ARID3A	chr11:33279537-33280483	HepG2	liver:	n/a	n/a
18	ARID3A	chr11:33499524-33499864	HepG2	liver:	n/a	n/a
19	ATF1	chr11:33341606-33341888	K562	blood:	n/a	n/a
20	ATF1	chr11:33564551-33564917	K562	blood:	n/a	n/a
21	ATF1	chr11:33394198-33394335	K562	blood:	n/a	n/a
22	ATF1	chr11:33275258-33275288	K562	blood:	n/a	n/a
23	ATF1	chr11:33249480-33249846	K562	blood:	n/a	n/a
24	ATF1	chr11:33329665-33330069	K562	blood:	n/a	n/a
25	ATF1	chr11:33351332-33351614	K562	blood:	n/a	n/a
26	ATF1	chr11:33342458-33342912	K562	blood:	n/a	n/a
27	ATF2	chr11:33547216-33547636	GM12878	blood:	n/a	n/a
28	ATF2	chr11:33404441-33405009	GM12878	blood:	n/a	n/a
29	ATF2	chr11:33411036-33411671	GM12878	blood:	n/a	n/a
30	ATF2	chr11:33409013-33410089	GM12878	blood:	n/a	n/a
31	ATF2	chr11:33404542-33405049	GM12878	blood:	n/a	n/a
32	ATF2	chr11:33409042-33410013	GM12878	blood:	n/a	n/a
33	ATF2	chr11:33279439-33280494	GM12878	blood:	n/a	n/a
34	ATF2	chr11:33279927-33280370	H1-hESC	embryonic stem cell:	n/a	n/a
35	ATF3	chr11:33279487-33279990	A549	lung:	n/a	n/a
36	ATF3	chr11:33279599-33280413	A549	lung:	n/a	n/a
37	ATF3	chr11:33249491-33249809	K562	blood:	n/a	n/a
38	ATF3	chr11:33342449-33342699	K562	blood:	n/a	n/a
39	ATF3	chr11:33382233-33382453	K562	blood:	n/a	chr11:33382358-33382372
40	BACH1	chr11:33279271-33279281	H1-hESC	embryonic stem cell:	n/a	n/a
41	BACH1	chr11:33397385-33398563	H1-hESC	embryonic stem cell:	n/a	n/a
42	BACH1	chr11:33279652-33280280	H1-hESC	embryonic stem cell:	n/a	n/a
43	BACH1	chr11:33364471-33364818	K562	blood:	n/a	n/a
44	BATF	chr11:33363521-33363808	GM12878	blood:	n/a	n/a
45	BATF	chr11:33411172-33411511	GM12878	blood:	n/a	n/a
46	BATF	chr11:33547673-33547858	GM12878	blood:	n/a	n/a
47	BATF	chr11:33547665-33547985	GM12878	blood:	n/a	n/a
48	BATF	chr11:33596965-33597171	GM12878	blood:	n/a	n/a
49	BATF	chr11:33404575-33404911	GM12878	blood:	n/a	n/a
50	BATF	chr11:33408990-33409983	GM12878	blood:	n/a	n/a

(count:2933 , 50 per page) page: 1 2 3 4 5 6 7 ... 59

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr11:33398173-33398223	HEEpiC	esophagus:	n/a
2	chr11:33442321-33442371	HIPEpiC	eye:	n/a
3	chr11:33375412-33375462	GM12892	blood:	n/a
4	chr11:33563060-33563110	HCPEpiC	choroid plexus:	n/a
5	chr11:33398366-33398416	HCM	heart:	n/a
6	chr11:33398173-33398223	HEEpiC	esophagus:	n/a
7	chr11:33442321-33442371	HIPEpiC	eye:	n/a
8	chr11:33375412-33375462	GM12892	blood:	n/a
9	chr11:33563060-33563110	HCPEpiC	choroid plexus:	n/a
10	chr11:33398366-33398416	HCM	heart:	n/a
11	chr11:33279899-33279949	GM12878	blood:	n/a
12	chr11:33396983-33397033	Jurkat	blood:	n/a
13	chr11:33280348-33280398	AG04449	skin:	fetal
14	chr11:33397153-33397203	AG10803	skin:	n/a
15	chr11:33317015-33317065	BJ	skin:	n/a
16	chr11:33279136-33279186	CMK	blood:	n/a
17	chr11:33563946-33563996	GM06990	blood:	n/a
18	chr11:33278186-33278236	AoSMC	blood vessel:	n/a
19	chr11:33308269-33308319	AG10803	skin:	n/a
20	chr11:33278679-33278729	HPAEpiC	pulmonary alveolar:	n/a
21	chr11:33265440-33265490	MCF10A-Er-Src	breast:	n/a
22	chr11:33264842-33264892	HCF	heart:	n/a
23	chr11:33396859-33396909	GM12891	blood:	n/a
24	chr11:33397153-33397203	LNCaP	prostate:	n/a
25	chr11:33346306-33346356	NB4	blood:	n/a
26	chr11:33563377-33563427	GM12891	blood:	n/a
27	chr11:33308269-33308319	T-47D	breast:	n/a
28	chr11:33398173-33398223	A549	lung:	n/a
29	chr11:33400574-33400624	H1-hESC	embryonic stem cell:	embryo
30	chr11:33398366-33398416	SKMC	muscle:	n/a
31	chr11:33397689-33397739	Jurkat	blood:	n/a
32	chr11:33280012-33280062	SK-N-SH_RA	brain:	n/a
33	chr11:33563720-33563770	HRCEpiC	kidney:	n/a
34	chr11:33398173-33398223	PFSK-1	brain:	n/a
35	chr11:33308269-33308319	RPTEC	kidney:	n/a
36	chr11:33278186-33278236	GM19239	blood:	n/a
37	chr11:33396983-33397033	AG09309	skin:	n/a
38	chr11:33317093-33317143	PrEC	prostate:	n/a
39	chr11:33563060-33563110	HRE	kidney:	n/a
40	chr11:33279087-33279137	GM06990	blood:	n/a
41	chr11:33398173-33398223	Hepatocyte	liver:	n/a
42	chr11:33280012-33280062	HEK293	kidney:	embryo
43	chr11:33278679-33278729	CMK	blood:	n/a
44	chr11:33396983-33397033	MCF-7	breast:	n/a
45	chr11:33563060-33563110	U87	brain:	n/a
46	chr11:33396859-33396909	GM19239	blood:	n/a
47	chr11:33279136-33279186	HRE	kidney:	n/a
48	chr11:33280012-33280062	T-47D	breast:	n/a
49	chr11:33398173-33398223	NT2-D1	testis:	n/a
50	chr11:33317093-33317143	AG10803	skin:	n/a

(count:258 , 50 per page) page: 1 2 3 4 5 6

No.	Distal block	Cell Line	Cell type
1	chr11:33413545..33415997-chr11:33484077..33486158,2	K562	blood:
2	chr11:33350757..33353405-chr11:33354429..33357042,2	K562	blood:
3	chr11:33327923..33330739-chr11:33334207..33336221,2	K562	blood:
4	chr11:33377235..33380179-chr11:33384228..33387621,3	K562	blood:
5	chr11:33433824..33436288-chr11:33439074..33441301,2	K562	blood:
6	chr11:33326071..33328703-chr11:33331126..33332666,2	K562	blood:
7	chr11:33495157..33498013-chr11:33505516..33507926,2	K562	blood:
8	chr11:33308929..33311681-chr11:33352469..33354383,2	MCF-7	breast:
9	chr11:33278689..33280532-chr11:33344460..33346639,2	K562	blood:
10	chr11:33278126..33279710-chr11:33347501..33349004,2	MCF-7	breast:
11	chr11:33192932..33194844-chr11:33338349..33340157,2	K562	blood:
12	chr11:33579969..33581756-chr11:33591394..33593164,2	K562	blood:
13	chr11:33616152..33618117-chr11:33620573..33622501,2	K562	blood:
14	chr11:33183085..33184714-chr11:33357286..33359018,2	K562	blood:
15	chr11:33275628..33278249-chr11:33296623..33299579,2	MCF-7	breast:
16	chr10:74385851..74386629-chr11:33278605..33279285,2	Hela-S3	cervix:
17	chr11:33277967..33280794-chr11:33331091..33333165,2	K562	blood:
18	chr11:33279747..33280263-chrX:23801172..23801824,2	Hela-S3	cervix:
19	chr11:33330031..33332498-chr11:33332591..33335075,2	MCF-7	breast:
20	chr11:33365715..33367217-chr11:33368914..33370934,2	K562	blood:
21	chr11:33380757..33382861-chr11:33395684..33398398,2	MCF-7	breast:
22	chr11:33278726..33280450-chr11:33281351..33283602,2	MCF-7	breast:
23	chr11:33596418..33599960-chr11:33602202..33605438,3	K562	blood:
24	chr11:33382588..33385319-chr11:33707872..33709435,2	MCF-7	breast:
25	chr11:33283955..33286219-chr11:33326919..33329577,2	K562	blood:
26	chr11:33345288..33347427-chr11:33347864..33349944,2	MCF-7	breast:
27	chr11:33272062..33275695-chr11:33277620..33281399,4	MCF-7	breast:
28	chr11:33620405..33623249-chr11:33624905..33627083,2	K562	blood:
29	chr11:33330605..33333745-chr11:33333939..33336380,3	K562	blood:
30	chr11:33497434..33499618-chr11:33502949..33504703,2	K562	blood:
31	chr11:33277741..33279641-chr11:33288313..33289989,2	MCF-7	breast:
32	chr11:33360349..33362095-chr11:33370787..33373728,2	MCF-7	breast:
33	chr11:33582088..33585071-chr11:33604919..33607475,2	MCF-7	breast:
34	chr11:33403805..33405903-chr11:33414463..33417062,2	MCF-7	breast:
35	chr11:33517532..33520401-chr11:33525287..33527358,2	K562	blood:
36	chr11:33534524..33537058-chr11:33559192..33562148,2	K562	blood:
37	chr11:32912949..32915416-chr11:33278689..33280447,2	MCF-7	breast:
38	chr11:33181657..33184341-chr11:33279051..33282180,3	MCF-7	breast:
39	chr11:33279534..33280463-chr2:39351094..39351986,2	Hela-S3	cervix:
40	chr11:33582088..33585071-chr11:33604919..33607475,2	MCF-7	breast:
41	chr11:33596599..33600481-chr11:33606542..33609139,3	K562	blood:
42	chr11:33327923..33330739-chr11:33334207..33336221,2	K562	blood:
43	chr11:33593866..33595976-chr11:33607119..33609770,2	K562	blood:
44	chr11:33284231..33286219-chr11:33288903..33290704,3	K562	blood:
45	chr11:32913861..32915566-chr11:33278350..33280856,3	K562	blood:
46	chr11:33384382..33386417-chr11:33393888..33396516,2	K562	blood:
47	chr11:33432981..33435559-chr11:33436354..33439310,2	K562	blood:
48	chr11:33279298..33280086-chr19:48824977..48825601,2	Hela-S3	cervix:
49	chr11:33517532..33520401-chr11:33525287..33527358,2	K562	blood:
50	chr11:33421417..33423758-chr11:33435787..33437817,2	K562	blood:

(count:4 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-TCP11L1-4	chr11:33334713-33335041	expReg_chr11_2985_+
2	lnc-C11orf41-5	chr11:33472192-33472489	NONHSAT018701
3	lnc-HIPK3-2	chr11:33424762-33425151	NONHSAT018700
4	lnc-TCP11L1-3	chr11:33333205-33333598	expReg_chr11_2971_+

No data

(count:14 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location
1	HIPK3	hsa-miR-92a-3p	chr11:33375388-33375409
2	HIPK3	hsa-miR-106a-5p	chr11:33375245-33375267
3	HIPK3	hsa-miR-106a-5p	chr11:33375709-33375730
4	HIPK3	hsa-miR-124-3p	chr11:33375663-33375670
5	HIPK3	hsa-miR-124-3p	chr11:33375376-33375395
6	HIPK3	hsa-miR-20b-5p	chr11:33375709-33375730
7	HIPK3	hsa-miR-19b-3p	chr11:33375275-33375282
8	HIPK3	hsa-miR-335-5p	chr11:33375589-33375614
9	HIPK3	hsa-miR-92a-3p	chr11:33375214-33375235
10	HIPK3	hsa-miR-19b-3p	chr11:33375260-33375282
11	HIPK3	hsa-miR-19b-3p	chr11:33358682-33358704
12	HIPK3	hsa-miR-20b-5p	chr11:33375245-33375267
13	HIPK3	hsa-miR-92a-3p	chr11:33375228-33375234
14	HIPK3	hsa-miR-124-3p	chr11:33375651-33375670

Variant related genes	Relation type
HIPK3	TF binding region
ENSG00000241255	TF binding region
ENSG00000255207	TF binding region
KIAA1549L	TF binding region
ENSG00000254537	TF binding region
ENSG00000223134	TF binding region
HIPK3	CpG island
ENSG00000241255	CpG island
ENSG00000255207	CpG island
KIAA1549L	CpG island
ENSG00000254537	CpG island
ENSG00000223134	CpG island
ENSG00000254537	chromatin interactions
ENSG00000175634	chromatin interactions
ENSG00000236778	chromatin interactions
ENSG00000182718	chromatin interactions
ENSG00000107745	chromatin interactions
ENSG00000196331	chromatin interactions
ENSG00000247151	chromatin interactions
ENSG00000128595	chromatin interactions
ENSG00000079805	chromatin interactions
ENSG00000263004	chromatin interactions
ENSG00000176102	chromatin interactions
ENSG00000060749	chromatin interactions
ENSG00000206808	chromatin interactions
ENSG00000132570	chromatin interactions
ENSG00000254718	chromatin interactions
ENSG00000223134	chromatin interactions
ENSG00000115904	chromatin interactions
ENSG00000105479	chromatin interactions
ENSG00000260924	chromatin interactions
ENSG00000135387	chromatin interactions
ENSG00000102786	chromatin interactions
ENSG00000117335	chromatin interactions
ENSG00000199568	chromatin interactions
ENSG00000206573	chromatin interactions
ENSG00000255207	chromatin interactions
ENSG00000134294	chromatin interactions
ENSG00000110422	chromatin interactions
ENSG00000085063	chromatin interactions
ENSG00000207972	chromatin interactions
ENSG00000130066	chromatin interactions

Extended variants
information (count: 14060 )
Associated
traits (count: 89 )

Variant overlapped rSNPs/rCNVs (count:14060 , 50 per page) page: 1 2 3 4 5 6 7 ... 282

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs370841613	chr11:33249403-33249404	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
2	rs541873144	chr11:33249496-33249497	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
3	rs555996905	chr11:33249552-33249553	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs575535509	chr11:33249590-33249591	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs74588243	chr11:33249591-33249592	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
6	rs142985609	chr11:33249620-33249621	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
7	rs575927306	chr11:33249622-33249623	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
8	rs545477323	chr11:33249626-33249627	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
9	rs559201953	chr11:33249627-33249628	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
10	rs528063488	chr11:33249634-33249635	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
11	rs543352181	chr11:33249653-33249654	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
12	rs187460048	chr11:33249713-33249714	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
13	rs75232205	chr11:33249743-33249744	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
14	rs373521876	chr11:33249750-33249751	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
15	rs530814847	chr11:33249775-33249776	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
16	rs550939579	chr11:33249796-33249797	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs368203322	chr11:33249803-33249804	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs570635710	chr11:33249861-33249862	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs546532295	chr11:33249953-33249954	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs539676766	chr11:33249955-33249956	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs553396687	chr11:33249983-33249984	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs372083896	chr11:33249996-33249997	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs375114926	chr11:33250016-33250017	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs535793580	chr11:33250059-33250060	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs555486427	chr11:33250072-33250073	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs575283119	chr11:33250078-33250079	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs565085691	chr11:33250114-33250115	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs145153840	chr11:33250232-33250233	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs111835051	chr11:33250253-33250254	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs191499792	chr11:33250302-33250303	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs577782412	chr11:33250337-33250338	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs540494518	chr11:33250338-33250339	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs531135385	chr11:33250385-33250386	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs559355531	chr11:33250407-33250408	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs267432	chr11:33250417-33250418	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
36	rs184031031	chr11:33250455-33250456	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs11608119	chr11:33250478-33250479	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
38	rs530547644	chr11:33250550-33250551	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs113756068	chr11:33250565-33250566	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs71479201	chr11:33250566-33250567	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs528905868	chr11:33250603-33250604	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs142262146	chr11:33250643-33250644	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs111469844	chr11:33250644-33250645	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs61706786	chr11:33250645-33250646	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs12785571	chr11:33250657-33250658	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs564385979	chr11:33250680-33250681	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs187172750	chr11:33250683-33250684	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs371357724	chr11:33250709-33250710	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs566914820	chr11:33250723-33250724	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs12785750	chr11:33250745-33250746	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:89)

Disease	PMID	Source
Breast cancer	17603634	CNVD
Medulloblastoma	21979893	CNVD
Thyroid cancer	19087340	CNVD
Melanoma	18172304	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Wilms tumour	21544195	CNVD
Parathyroid adenoma	22454399	CNVD
Chordoma	21602918	CNVD
Breast cancer	21949216	CNVD
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	19222835	CNVD
T-cell acute lymphoblastic leukemia	20065082	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Beckwith-Wiedemann syndrome	21518781	CNVD
Wilms tumour	21518781	CNVD
Hepatoblastoma	21518781	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Paraganglioma	17535989	CNVD
Pulmonary chondroma	17535989	CNVD
Gastric cancer	17908304	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Multiple myeloma	20724749	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Autism	22495311	CNVD
Prostate cancer	18632612	CNVD
Lung cancer	18438408	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Non-small cell lung cancer	21385341	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	21785460	CNVD
Medulloblastoma	16783165	CNVD
small cell lung cancer	20016488	CNVD
Renal cell carcinoma	18194544	CNVD
Potocki-Shaffer syndrome	19222835	CNVD
WAGR syndrome	19222835	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Breast cancer	21364760	CNVD
Glioblastoma multiforme	22286061	CNVD
Aniridia syndrome	21572526	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	16272173	CNVD
Retinoblastoma	22278416	CNVD
Denys-drash syndrome	21085971	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
WAGR syndrome	16773131	CNVD
Disorders of sex development	22290220	CNVD
Aniridia syndrome	17204608	CNVD
Mental retardation	17204608	CNVD
WAGR syndrome	19617690	CNVD
genitourinary abnormalities	17204608	CNVD
Breast cancer	16397240	CNVD
Mental retardation	16773131	CNVD
Multiple myeloma	16616336	CNVD
Cancer	17160897	CNVD
Cancer	21183584	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
WAGR syndrome	22470819	CNVD
Neurodevelopmental disorder	22521361	CNVD
Denys-drash syndrome	19566914	CNVD
Familial wilms tumor	19566914	CNVD
Frasier syndrome	19566914	CNVD
Non-small cell lung cancer	21829676	CNVD
WAGR syndrome	20603712	CNVD
Autism	17322880	CNVD
Renal cell carcinoma	18765545	CNVD
Breast cancer	21858162	CNVD
Cancer	20164920	CNVD
Breast cancer	16620391	CNVD
early-passage human iPS cells	21368824	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD

Chromatin state (count:5899 , 50 per page) page: 1 2 3 4 5 6 7 ... 118

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:33244800-33255800	Weak transcription	Primary hematopoietic stem cells	blood
2	chr11:33246800-33250600	Enhancers	Primary monocytes fromperipheralblood	blood
3	chr11:33248600-33250200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
4	chr11:33248800-33250000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
5	chr11:33249000-33249800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
6	chr11:33249000-33249800	Enhancers	Psoas Muscle	Psoas
7	chr11:33249000-33249800	Enhancers	Skeletal Muscle Female	skeletal muscle
8	chr11:33249000-33250000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
9	chr11:33249000-33250000	Enhancers	Muscle Satellite Cultured Cells	--
10	chr11:33249000-33250000	Enhancers	HSMMtube	muscle
11	chr11:33249000-33250200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
12	chr11:33249000-33250200	Enhancers	Adipose Nuclei	Adipose
13	chr11:33249000-33250200	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
14	chr11:33249000-33250400	Enhancers	Primary neutrophils fromperipheralblood	blood
15	chr11:33249000-33250400	Enhancers	Hela-S3	cervix
16	chr11:33249800-33255000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
17	chr11:33250200-33250400	Enhancers	Monocytes-CD14+_RO01746	blood
18	chr11:33250400-33255200	Weak transcription	Monocytes-CD14+_RO01746	blood
19	chr11:33250600-33255400	Weak transcription	Primary monocytes fromperipheralblood	blood
20	chr11:33255000-33255200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
21	chr11:33255000-33257200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
22	chr11:33255200-33256000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
23	chr11:33255200-33256200	Enhancers	Monocytes-CD14+_RO01746	blood
24	chr11:33255400-33257600	Enhancers	Primary monocytes fromperipheralblood	blood
25	chr11:33255800-33256200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
26	chr11:33255800-33256400	Enhancers	Placenta	Placenta
27	chr11:33255800-33256800	Enhancers	Primary hematopoietic stem cells	blood
28	chr11:33256000-33256200	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
29	chr11:33256000-33256200	Enhancers	Lung	lung
30	chr11:33256000-33256400	Enhancers	Primary B cells from cord blood	blood
31	chr11:33256000-33256800	Enhancers	Primary hematopoietic stem cells short term culture	blood
32	chr11:33256000-33257000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
33	chr11:33256000-33257600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
34	chr11:33256200-33256600	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
35	chr11:33256200-33256800	Enhancers	HSMMtube	muscle
36	chr11:33256200-33256800	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
37	chr11:33256200-33256800	Enhancers	NHLF	lung
38	chr11:33256200-33257000	Enhancers	HUVEC	blood vessel
39	chr11:33256200-33257200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
40	chr11:33256200-33257200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
41	chr11:33256200-33257200	Weak transcription	Lung	lung
42	chr11:33256200-33258000	Enhancers	Adipose Nuclei	Adipose
43	chr11:33256400-33256800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
44	chr11:33256400-33256800	Enhancers	Duodenum Smooth Muscle	Duodenum
45	chr11:33256400-33256800	Weak transcription	Placenta	Placenta
46	chr11:33256400-33257000	Enhancers	Muscle Satellite Cultured Cells	--
47	chr11:33256400-33257000	Enhancers	Fetal Lung	lung
48	chr11:33256400-33257200	Enhancers	Fetal Kidney	kidney
49	chr11:33256600-33257000	Enhancers	HSMM	muscle
50	chr11:33256600-33257200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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