Variant report

Variant	nsv541334
Chromosome Location	chr12:627038-658665
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr12:656149-656351	HepG2	liver:	n/a	n/a
2	ATF3	chr12:656152-656565	A549	lung:	n/a	n/a
3	ATF3	chr12:656100-656281	K562	blood:	n/a	n/a
4	BCLAF1	chr12:656074-656472	GM12878	blood:	n/a	n/a
5	BHLHE40	chr12:632323-632391	HepG2	liver:	n/a	n/a
6	BHLHE40	chr12:656137-656470	GM12878	blood:	n/a	n/a
7	BHLHE40	chr12:656129-656368	K562	blood:	n/a	n/a
8	BRCA1	chr12:656191-656341	HepG2	liver:	n/a	n/a
9	BRCA1	chr12:656068-656439	Hela-S3	cervix:	n/a	n/a
10	CBX3	chr12:656098-656486	K562	blood:	n/a	n/a
11	CBX3	chr12:641490-641751	K562	blood:	n/a	n/a
12	CCNT2	chr12:656103-656402	K562	blood:	n/a	n/a
13	CEBPB	chr12:635038-635327	HepG2	liver:	n/a	chr12:635144-635157 chr12:635144-635155 chr12:635144-635157 chr12:635145-635156
14	CEBPB	chr12:635046-635293	IMR90	lung:	n/a	chr12:635144-635157 chr12:635144-635155 chr12:635144-635157 chr12:635145-635156
15	CEBPB	chr12:656230-656238	K562	blood:	n/a	n/a
16	CEBPB	chr12:631954-632154	HepG2	liver:	n/a	chr12:632053-632064
17	CEBPB	chr12:656127-656441	Hela-S3	cervix:	n/a	n/a
18	CEBPB	chr12:642021-642363	IMR90	lung:	n/a	n/a
19	CEBPB	chr12:637993-638179	HepG2	liver:	n/a	chr12:638080-638091 chr12:638153-638161
20	CEBPB	chr12:656149-656371	HepG2	liver:	n/a	n/a
21	CEBPB	chr12:631994-632121	HepG2	liver:	n/a	chr12:632053-632064
22	CEBPD	chr12:656135-656384	HepG2	liver:	n/a	n/a
23	CHD1	chr12:655991-656867	IMR90	lung:	n/a	n/a
24	CHD2	chr12:656144-656438	Hela-S3	cervix:	n/a	n/a
25	CHD2	chr12:656232-656384	K562	blood:	n/a	n/a
26	CHD2	chr12:656324-656326	HepG2	liver:	n/a	n/a
27	CREB1	chr12:646824-647320	ECC-1	luminal epithelium:	n/a	chr12:647157-647170
28	CREB1	chr12:656037-656458	A549	lung:	n/a	n/a
29	CTCF	chr12:656200-656350	HCFaa	heart:	n/a	chr12:656271-656292 chr12:656278-656291 chr12:656277-656293 chr12:656282-656291 chr12:656278-656291 chr12:656276-656294 chr12:656279-656289
30	CTCF	chr12:656220-656370	AG10803	skin:	n/a	chr12:656271-656292 chr12:656278-656291 chr12:656277-656293 chr12:656282-656291 chr12:656278-656291 chr12:656276-656294 chr12:656279-656289
31	CTCF	chr12:656220-656370	GM12864	blood:	n/a	chr12:656271-656292 chr12:656278-656291 chr12:656277-656293 chr12:656282-656291 chr12:656278-656291 chr12:656276-656294 chr12:656279-656289
32	CTCF	chr12:656200-656350	BJ	skin:	n/a	chr12:656271-656292 chr12:656278-656291 chr12:656277-656293 chr12:656282-656291 chr12:656278-656291 chr12:656276-656294 chr12:656279-656289
33	CTCF	chr12:656200-656350	AG10803	skin:	n/a	chr12:656271-656292 chr12:656278-656291 chr12:656277-656293 chr12:656282-656291 chr12:656278-656291 chr12:656276-656294 chr12:656279-656289
34	CTCF	chr12:651280-651430	HMEC	breast:	n/a	n/a
35	CTCF	chr12:656102-656459	GM19240	blood:	n/a	chr12:656271-656292 chr12:656278-656291 chr12:656277-656293 chr12:656282-656291 chr12:656278-656291 chr12:656276-656294 chr12:656279-656289
36	CTCF	chr12:651336-651367	Pancreas_OC	pancreas:	n/a	n/a
37	CTCF	chr12:651287-651452	MCF-7	breast:	n/a	n/a
38	CTCF	chr12:656240-656390	HA-sp	spinal cord:	n/a	chr12:656271-656292 chr12:656278-656291 chr12:656277-656293 chr12:656282-656291 chr12:656278-656291 chr12:656276-656294 chr12:656279-656289
39	CTCF	chr12:656200-656350	GM12868	blood:	n/a	chr12:656271-656292 chr12:656278-656291 chr12:656277-656293 chr12:656282-656291 chr12:656278-656291 chr12:656276-656294 chr12:656279-656289
40	CTCF	chr12:656180-656330	WI-38	lung:	n/a	chr12:656271-656292 chr12:656278-656291 chr12:656277-656293 chr12:656282-656291 chr12:656278-656291 chr12:656276-656294 chr12:656279-656289
41	CTCF	chr12:656131-656447	GM10266	blood:	n/a	chr12:656271-656292 chr12:656278-656291 chr12:656277-656293 chr12:656282-656291 chr12:656278-656291 chr12:656276-656294 chr12:656279-656289
42	CTCF	chr12:656140-656290	A549	lung:	n/a	chr12:656279-656289
43	CTCF	chr12:656540-656690	GM12872	blood:	n/a	n/a
44	CTCF	chr12:655766-656695	MCF-7	breast:	n/a	chr12:656271-656292 chr12:656278-656291 chr12:656277-656293 chr12:656282-656291 chr12:656278-656291 chr12:656276-656294 chr12:656279-656289
45	CTCF	chr12:651391-651452	Kidney_OC	kidney:	n/a	n/a
46	CTCF	chr12:656400-656550	HAc	cerebellar:	n/a	n/a
47	CTCF	chr12:656137-656456	Pancreas_OC	pancreas:	n/a	chr12:656271-656292 chr12:656278-656291 chr12:656277-656293 chr12:656282-656291 chr12:656278-656291 chr12:656276-656294 chr12:656279-656289
48	CTCF	chr12:655880-656030	GM12875	blood:	n/a	n/a
49	CTCF	chr12:656200-656350	HEK293	kidney:	n/a	chr12:656271-656292 chr12:656278-656291 chr12:656277-656293 chr12:656282-656291 chr12:656278-656291 chr12:656276-656294 chr12:656279-656289
50	CTCF	chr12:646964-646977	MCF-7	breast:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr12:630892-630942	NB4	blood:	n/a
2	chr12:655964-656014	HRCEpiC	kidney:	n/a
3	chr12:630892-630942	NB4	blood:	n/a
4	chr12:655964-656014	HRCEpiC	kidney:	n/a
5	chr12:656757-656807	NB4	blood:	n/a
6	chr12:656757-656807	BE2_C	brain:	n/a
7	chr12:655829-655879	HNPCEpiC	eye:	n/a
8	chr12:656726-656776	GM12891	blood:	n/a
9	chr12:630807-630857	GM19239	blood:	n/a
10	chr12:657046-657096	HRCEpiC	kidney:	n/a
11	chr12:657046-657096	Caco-2	colon:	n/a
12	chr12:630773-630823	ProgFib	skin:	n/a
13	chr12:656423-656473	GM19239	blood:	n/a
14	chr12:656726-656776	HRCEpiC	kidney:	n/a
15	chr12:655964-656014	LNCaP	prostate:	n/a
16	chr12:656757-656807	ProgFib	skin:	n/a
17	chr12:656757-656807	GM06990	blood:	n/a
18	chr12:655829-655879	NT2-D1	testis:	n/a
19	chr12:656726-656776	IMR90	lung:	fetal
20	chr12:650711-650761	PANC-1	pancreas:	n/a
21	chr12:630892-630942	NHBE	bronchial:	n/a
22	chr12:656703-656753	NB4	blood:	n/a
23	chr12:657046-657096	BE2_C	brain:	n/a
24	chr12:656726-656776	RPTEC	kidney:	n/a
25	chr12:656757-656807	AG04449	skin:	fetal
26	chr12:630807-630857	Caco-2	colon:	n/a
27	chr12:630773-630823	PrEC	prostate:	n/a
28	chr12:630773-630823	RPTEC	kidney:	n/a
29	chr12:655829-655879	PFSK-1	brain:	n/a
30	chr12:656726-656776	LNCaP	prostate:	n/a
31	chr12:655829-655879	Caco-2	colon:	n/a
32	chr12:656757-656807	AG09309	skin:	n/a
33	chr12:656703-656753	HIPEpiC	eye:	n/a
34	chr12:655829-655879	AG04449	skin:	fetal
35	chr12:655964-656014	SK-N-SH_RA	brain:	n/a
36	chr12:630773-630823	HAEpiC	amniotic membrane:	n/a
37	chr12:657046-657096	LNCaP	prostate:	n/a
38	chr12:655964-656014	HNPCEpiC	eye:	n/a
39	chr12:656757-656807	CMK	blood:	n/a
40	chr12:656423-656473	Hepatocyte	liver:	n/a
41	chr12:650711-650761	GM12892	blood:	n/a
42	chr12:657046-657096	HAEpiC	amniotic membrane:	n/a
43	chr12:630892-630942	ECC-1	luminal epithelium:	n/a
44	chr12:630773-630823	HPAEpiC	pulmonary alveolar:	n/a
45	chr12:656757-656807	HUVEC	blood vessel:	n/a
46	chr12:630773-630823	HMEC	breast:	n/a
47	chr12:656703-656753	Jurkat	blood:	n/a
48	chr12:655964-656014	GM06990	blood:	n/a
49	chr12:655829-655879	HRE	kidney:	n/a
50	chr12:656423-656473	HepG2	liver:	n/a

No.	Distal block	Cell Line	Cell type
1	chr12:549410..550324-chr12:655836..656812,2	K562	blood:
2	chr12:561777..563247-chr12:653593..656972,77	MCF-7	breast:
3	chr12:650148..653007-chr12:654069..655622,2	K562	blood:
4	chr12:656034..658407-chr12:660278..663078,2	MCF-7	breast:
5	chr12:622277..623146-chr12:632963..633980,6	MCF-7	breast:
6	chr12:551367..552157-chr12:655845..657279,4	MCF-7	breast:
7	chr12:631879..633874-chr12:643555..645936,2	K562	blood:
8	chr12:633000..634015-chr12:680744..681736,4	MCF-7	breast:
9	chr12:563547..564241-chr12:655739..656517,2	MCF-7	breast:
10	chr12:589171..589964-chr12:633097..633983,2	MCF-7	breast:
11	chr12:627385..629195-chr12:632325..634029,2	K562	blood:
12	chr12:561789..563094-chr12:650609..651816,8	MCF-7	breast:
13	chr12:655824..656332-chr19:54950316..54950832,2	MCF-7	breast:
14	chr12:565368..565882-chr12:633415..633928,2	MCF-7	breast:
15	chr12:626830..629195-chr12:631126..633825,2	K562	blood:
16	chr12:551206..552180-chr12:655785..656728,9	K562	blood:
17	chr12:646530..648692-chr12:654414..656219,2	MCF-7	breast:
18	chr12:562103..563075-chr12:634406..635587,3	MCF-7	breast:
19	chr12:510904..511428-chr12:655804..656333,2	MCF-7	breast:
20	chr12:651428..654360-chr12:656676..659200,3	MCF-7	breast:
21	chr12:623934..625776-chr12:628238..630617,2	MCF-7	breast:
22	chr12:622362..623146-chr12:632963..633907,2	MCF-7	breast:
23	chr12:562112..562967-chr12:655719..656711,9	K562	blood:
24	chr12:643233..646020-chr12:647234..650208,3	K562	blood:
25	chr12:643233..646020-chr12:647234..650208,4	K562	blood:
26	chr12:627385..629195-chr12:632325..634029,2	K562	blood:
27	chr12:618073..620518-chr12:625351..628084,2	MCF-7	breast:
28	chr12:567922..570491-chr12:654360..656771,2	MCF-7	breast:
29	chr12:567792..568717-chr12:633148..633750,3	MCF-7	breast:
30	chr12:622355..623083-chr12:633209..633927,4	MCF-7	breast:
31	chr12:559544..561291-chr12:645812..647419,2	K562	blood:
32	chr12:562086..563088-chr12:655521..657408,28	MCF-7	breast:
33	chr12:618074..619807-chr12:641547..643283,2	MCF-7	breast:
34	chr12:562705..564349-chr12:655693..658061,2	MCF-7	breast:
35	chr12:626830..629195-chr12:631126..633825,2	K562	blood:
36	chr12:645596..647518-chr12:650603..652175,2	MCF-7	breast:
37	chr12:611154..613945-chr12:632166..635023,2	MCF-7	breast:
38	chr12:645596..647518-chr12:650603..652175,2	MCF-7	breast:
39	chr12:633000..634118-chr12:680824..681736,4	MCF-7	breast:
40	chr12:563544..564514-chr12:655825..656615,2	MCF-7	breast:
41	chr12:617937..620233-chr12:642508..644938,2	MCF-7	breast:
42	chr12:632266..634936-chr12:638337..639948,2	MCF-7	breast:
43	chr12:631879..633874-chr12:643555..645936,2	K562	blood:
44	chr12:632266..634936-chr12:638337..639948,2	MCF-7	breast:
45	chr12:646530..648692-chr12:654414..656219,2	MCF-7	breast:
46	chr12:562205..562756-chr12:650853..651426,2	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-CCDC77-3	chr12:654048-654138	NONHSAT025345
2	lnc-CCDC77-3	chr12:653505-653600	NONHSAT025345
3	lnc-CCDC77-3	chr12:652284-652371	NONHSAT025345
4	lnc-CCDC77-3	chr12:654306-654570	NONHSAT025345

Variant related genes	Relation type
B4GALNT3	TF binding region
B4GALNT3	CpG island
ENSG00000267838	chromatin interactions
ENSG00000139044	chromatin interactions

Extended variants
information (count: 1511 )
Associated
traits (count: 85 )

Variant overlapped rSNPs/rCNVs (count:1511 , 50 per page) page: 1 2 3 4 5 6 7 ... 31

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs145686895	chr12:627128-627129	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
2	rs11838051	chr12:627139-627140	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
3	rs76513031	chr12:627191-627192	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
4	rs73032483	chr12:627194-627195	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
5	rs536518978	chr12:627204-627205	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs562264125	chr12:627243-627244	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs141455996	chr12:627247-627248	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs554856448	chr12:627305-627306	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs569906757	chr12:627347-627348	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs10047662	chr12:627376-627377	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
11	rs182206640	chr12:627402-627403	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
12	rs113825804	chr12:627413-627414	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
13	rs10047548	chr12:627419-627420	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
14	rs369580768	chr12:627420-627421	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
15	rs10047549	chr12:627438-627439	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
16	rs374524109	chr12:627447-627448	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
17	rs187996844	chr12:627454-627455	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
18	rs191110339	chr12:627458-627459	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
19	rs563579324	chr12:627475-627476	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
20	rs183905900	chr12:627476-627477	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
21	rs10047534	chr12:627478-627479	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
22	rs138186964	chr12:627515-627516	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
23	rs528167180	chr12:627537-627538	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
24	rs546310648	chr12:627565-627566	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
25	rs559823340	chr12:627589-627590	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
26	rs559484068	chr12:627614-627615	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
27	rs114002615	chr12:627634-627635	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
28	rs370203963	chr12:627656-627657	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
29	rs2286780	chr12:627659-627660	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
30	rs570323588	chr12:627678-627679	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
31	rs373315167	chr12:627700-627701	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
32	rs35527562	chr12:627712-627713	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
33	rs552524189	chr12:627713-627714	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
34	rs188424230	chr12:627730-627731	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
35	rs535088616	chr12:627758-627759	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
36	rs193022429	chr12:627767-627768	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
37	rs574638444	chr12:627791-627792	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
38	rs56271126	chr12:627805-627806	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
39	rs556918775	chr12:627807-627808	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs367856304	chr12:627817-627818	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs184970354	chr12:627834-627835	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs545806512	chr12:627846-627847	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs564081537	chr12:627921-627922	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs114974894	chr12:627932-627933	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs533967872	chr12:627996-627997	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs539898447	chr12:628031-628032	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs561448288	chr12:628048-628049	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs529000345	chr12:628064-628065	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs35788371	chr12:628076-628077	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
50	rs2286781	chr12:628090-628091	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a

Variant related diseases (count:85)

Disease	PMID	Source
Cancer	20164920	CNVD
Myelofibrosis	22110671	CNVD
Non-syndromic sensorineural hearing loss	19587683	CNVD
Glaucoma	21310917	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Malignant peripheral nerve sheath tumor	19844265	CNVD
Squamous cell cancer	19607727	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Hepatocellular carcinoma	16750200	CNVD
Breast cancer	17133270	CNVD
Esophageal squamous carcinoma	18405350	CNVD
Mental retardation	17847001	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
abnormal development	18461090	CNVD
Ovarian cancer	20844748	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Medulloblastoma	16968546	CNVD
Ovine squamous-cell carcinoma	17599052	CNVD
T-cell acute lymphoblastic leukemia	20065082	CNVD
Breast cancer	22032731	CNVD
Cancer	21183584	CNVD
Myxofibrosarcoma	16751306	CNVD
Non-small cell lung cancer	21829676	CNVD
Ovarian neoplasms	16753589	CNVD
Prostate cancer	21965145	CNVD
Acute myeloid leukemia	16864856	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Disorders of sex development	21048976	CNVD
Glioblastoma multiforme	21080181	CNVD
Liposarcoma	21253554	CNVD
Prostate cancer	19156837	CNVD
Emphysema	19352772	CNVD
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	17053054	CNVD
Malignant germ cell tumour	17285132	CNVD
Melanoma	18172304	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Wilms tumour	21544195	CNVD
Squamous cell cancer	21044232	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	19960244	CNVD
Endometrial cancer	22040021	CNVD
Colorectal cancer	20709793	CNVD
Breast cancer	21264507	CNVD
Cancer	16751803	CNVD
Testicular cancer	18059402	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Seminomas	18059402	CNVD
Esophageal cancer	21851588	CNVD
Lung cancer	20668451	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Testicular germ cell tumor	18059402	CNVD
Malaria	21533027	CNVD
Chronic lymphocytic leukemia	22228453	CNVD
small cell lung cancer	20016488	CNVD
Chronic lymphocytic leukemia	21670202	CNVD
Breast cancer	21364760	CNVD
Developmental delay	21147756	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Ewing''s sarcoma	17952124	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Acute myeloid leukemia	20729466	CNVD
Breast cancer	21858162	CNVD
Breast cancer	21509527	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21785460	CNVD
Autism	22495309	CNVD
Ovarian cancer	21720365	CNVD
Myelodysplastic syndrome	21251322	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Pleomorphic liposarcoma	18784837	CNVD
Melanoma	20877625	CNVD
Cancer	20164919	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Autism	22495311	CNVD

Chromatin state (count:804 , 50 per page) page: 1 2 3 4 5 6 7 ... 17

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:619800-628000	Weak transcription	Brain Anterior Caudate	brain
2	chr12:620200-633200	Weak transcription	NHEK	skin
3	chr12:620400-637600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr12:620400-638200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
5	chr12:620600-630600	Weak transcription	Rectal Mucosa Donor 29	rectum
6	chr12:620600-632800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
7	chr12:620600-636600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
8	chr12:620600-637800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
9	chr12:620800-648000	Weak transcription	Pancreas	Pancrea
10	chr12:622800-633400	Weak transcription	Gastric	stomach
11	chr12:623000-628800	Weak transcription	Right Atrium	heart
12	chr12:623200-629200	Weak transcription	Placenta Amnion	Placenta Amnion
13	chr12:623200-633200	Weak transcription	Right Ventricle	heart
14	chr12:623400-628400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
15	chr12:625400-630200	Enhancers	Fetal Heart	heart
16	chr12:626000-633400	Weak transcription	Stomach Mucosa	stomach
17	chr12:626600-628000	Weak transcription	Pancreatic Islets	Pancreatic Islet
18	chr12:626800-627200	Enhancers	HSMMtube	muscle
19	chr12:626800-627800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
20	chr12:626800-635200	Weak transcription	Aorta	Aorta
21	chr12:627000-627200	Bivalent Enhancer	HSMM	muscle
22	chr12:627000-628800	Weak transcription	Left Ventricle	heart
23	chr12:627400-627800	Bivalent Enhancer	Fetal Muscle Leg	muscle
24	chr12:627800-628600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
25	chr12:627800-628600	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
26	chr12:628000-628200	Enhancers	Cortex derived primary cultured neurospheres	brain
27	chr12:628000-628600	Enhancers	Brain Anterior Caudate	brain
28	chr12:628000-628600	Enhancers	Pancreatic Islets	Pancreatic Islet
29	chr12:628400-629800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
30	chr12:628600-629000	Active TSS	Pancreatic Islets	Pancreatic Islet
31	chr12:628600-629200	Enhancers	HUES6 Cell Line	embryonic stem cell
32	chr12:628600-632000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
33	chr12:628800-629200	Enhancers	Right Atrium	heart
34	chr12:628800-629400	Enhancers	Left Ventricle	heart
35	chr12:629000-629600	Enhancers	Pancreatic Islets	Pancreatic Islet
36	chr12:629000-630800	Enhancers	Placenta	Placenta
37	chr12:629200-630600	Weak transcription	Right Atrium	heart
38	chr12:629200-630800	Enhancers	Placenta Amnion	Placenta Amnion
39	chr12:629200-638200	Weak transcription	HUES6 Cell Line	embryonic stem cell
40	chr12:629400-629800	Enhancers	Breast Myoepithelial Primary Cells	Breast
41	chr12:629400-630400	Weak transcription	Left Ventricle	heart
42	chr12:629800-632200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
43	chr12:629800-633000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
44	chr12:630200-630400	Flanking Active TSS	Fetal Heart	heart
45	chr12:630400-630600	Bivalent Enhancer	Fetal Muscle Leg	muscle
46	chr12:630400-630800	Enhancers	Fetal Heart	heart
47	chr12:630400-631800	Enhancers	Primary hematopoietic stem cells short term culture	blood
48	chr12:630400-633800	Enhancers	Left Ventricle	heart
49	chr12:630600-631400	Enhancers	Right Atrium	heart
50	chr12:630600-631800	Strong transcription	Rectal Mucosa Donor 29	rectum

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