Variant report

Variant	nsv541339
Chromosome Location	chr12:786563-855811
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:848)
CpG islands
(count:61)
Chromatin interactive
region (count:46)
LncRNA
region (count:6)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:848 , 50 per page) page: 1 2 3 4 5 6 7 ... 17

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr12:811211-811478	HepG2	liver:	n/a	n/a
2	ARID3A	chr12:804017-804280	HepG2	liver:	n/a	n/a
3	ARID3A	chr12:835577-835922	HepG2	liver:	n/a	n/a
4	ATF1	chr12:825719-826045	K562	blood:	n/a	n/a
5	ATF2	chr12:852485-853543	GM12878	blood:	n/a	n/a
6	ATF2	chr12:791586-792067	GM12878	blood:	n/a	n/a
7	ATF2	chr12:852433-853559	GM12878	blood:	n/a	n/a
8	ATF2	chr12:831506-831972	H1-hESC	embryonic stem cell:	n/a	n/a
9	ATF2	chr12:788057-788653	GM12878	blood:	n/a	n/a
10	ATF2	chr12:788224-788729	GM12878	blood:	n/a	n/a
11	ATF2	chr12:831517-832014	GM12878	blood:	n/a	n/a
12	ATF2	chr12:794524-795256	GM12878	blood:	n/a	n/a
13	ATF2	chr12:794559-795159	GM12878	blood:	n/a	n/a
14	BACH1	chr12:821401-821686	H1-hESC	embryonic stem cell:	n/a	n/a
15	BACH1	chr12:839594-839599	H1-hESC	embryonic stem cell:	n/a	n/a
16	BATF	chr12:794527-794937	GM12878	blood:	n/a	n/a
17	BATF	chr12:852430-853372	GM12878	blood:	n/a	n/a
18	BATF	chr12:852571-853389	GM12878	blood:	n/a	n/a
19	BATF	chr12:829469-829800	GM12878	blood:	n/a	n/a
20	BATF	chr12:790969-791173	GM12878	blood:	n/a	n/a
21	BATF	chr12:788112-788433	GM12878	blood:	n/a	n/a
22	BATF	chr12:786469-786782	GM12878	blood:	n/a	n/a
23	BATF	chr12:813790-814076	GM12878	blood:	n/a	n/a
24	BATF	chr12:786399-786770	GM12878	blood:	n/a	n/a
25	BATF	chr12:801600-801857	GM12878	blood:	n/a	n/a
26	BATF	chr12:831550-831921	GM12878	blood:	n/a	n/a
27	BCL11A	chr12:852437-853366	GM12878	blood:	n/a	n/a
28	BCL11A	chr12:852468-852906	GM12878	blood:	n/a	n/a
29	BCL11A	chr12:853057-853296	GM12878	blood:	n/a	n/a
30	BCL3	chr12:836448-836759	GM12878	blood:	n/a	n/a
31	BCL3	chr12:831557-832004	GM12878	blood:	n/a	n/a
32	BCL3	chr12:804164-804717	GM12878	blood:	n/a	n/a
33	BCL3	chr12:804202-804619	GM12878	blood:	n/a	n/a
34	BCLAF1	chr12:791584-792121	GM12878	blood:	n/a	n/a
35	BCLAF1	chr12:852380-853285	GM12878	blood:	n/a	n/a
36	BCLAF1	chr12:828524-829064	GM12878	blood:	n/a	n/a
37	BCLAF1	chr12:828595-829028	GM12878	blood:	n/a	n/a
38	BCLAF1	chr12:852273-853306	GM12878	blood:	n/a	n/a
39	BCLAF1	chr12:831441-831916	GM12878	blood:	n/a	n/a
40	BHLHE40	chr12:799676-799931	HepG2	liver:	n/a	n/a
41	BHLHE40	chr12:835626-835908	HepG2	liver:	n/a	n/a
42	BHLHE40	chr12:852514-853441	GM12878	blood:	n/a	n/a
43	BHLHE40	chr12:787572-787807	GM12878	blood:	n/a	n/a
44	BHLHE40	chr12:791720-792133	GM12878	blood:	n/a	n/a
45	BHLHE40	chr12:825633-826099	K562	blood:	n/a	n/a
46	BHLHE40	chr12:790942-790946	GM12878	blood:	n/a	n/a
47	BHLHE40	chr12:788152-788477	GM12878	blood:	n/a	n/a
48	BHLHE40	chr12:794453-794940	GM12878	blood:	n/a	n/a
49	BHLHE40	chr12:793632-793844	GM12878	blood:	n/a	n/a
50	BHLHE40	chr12:801695-801724	GM12878	blood:	n/a	n/a

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr12:822286-822336	ProgFib	skin:	n/a
2	chr12:822286-822336	NT2-D1	testis:	n/a
3	chr12:822286-822336	GM12878	blood:	n/a
4	chr12:822286-822336	HRPEpiC	eye:	n/a
5	chr12:822286-822336	RPTEC	kidney:	n/a
6	chr12:822286-822336	HL-60	blood:	n/a
7	chr12:822286-822336	SAEC	small airway:	n/a
8	chr12:822286-822336	HCPEpiC	choroid plexus:	n/a
9	chr12:822286-822336	AoSMC	blood vessel:	n/a
10	chr12:822286-822336	AG04450	lung:	fetal
11	chr12:822286-822336	GM19239	blood:	n/a
12	chr12:822286-822336	HCT-116	colon:	n/a
13	chr12:822286-822336	NHBE	bronchial:	n/a
14	chr12:822286-822336	PANC-1	pancreas:	n/a
15	chr12:822286-822336	MCF10A-Er-Src	breast:	n/a
16	chr12:822286-822336	HEEpiC	esophagus:	n/a
17	chr12:822286-822336	HRE	kidney:	n/a
18	chr12:822286-822336	SK-N-SH	brain:	n/a
19	chr12:822286-822336	NH-A	brain:	n/a
20	chr12:822286-822336	Caco-2	colon:	n/a
21	chr12:822286-822336	NHDF-neo	bronchial:	n/a
22	chr12:822286-822336	PFSK-1	brain:	n/a
23	chr12:822286-822336	T-47D	breast:	n/a
24	chr12:822286-822336	ECC-1	luminal epithelium:	n/a
25	chr12:822286-822336	AG04449	skin:	fetal
26	chr12:822286-822336	BJ	skin:	n/a
27	chr12:822286-822336	GM12892	blood:	n/a
28	chr12:822286-822336	SKMC	muscle:	n/a
29	chr12:822286-822336	HCF	heart:	n/a
30	chr12:822286-822336	HRCEpiC	kidney:	n/a
31	chr12:822286-822336	MCF-7	breast:	n/a
32	chr12:822286-822336	LNCaP	prostate:	n/a
33	chr12:822286-822336	HIPEpiC	eye:	n/a
34	chr12:822286-822336	Hepatocyte	liver:	n/a
35	chr12:822286-822336	GM06990	blood:	n/a
36	chr12:822286-822336	HPAEpiC	pulmonary alveolar:	n/a
37	chr12:822286-822336	NB4	blood:	n/a
38	chr12:822286-822336	Jurkat	blood:	n/a
39	chr12:822286-822336	AG09319	gingival:	n/a
40	chr12:822286-822336	SK-N-SH_RA	brain:	n/a
41	chr12:822286-822336	HNPCEpiC	eye:	n/a
42	chr12:822286-822336	AG09309	skin:	n/a
43	chr12:822286-822336	SK-N-MC	brain:	n/a
44	chr12:822286-822336	A549	lung:	n/a
45	chr12:822286-822336	HEK293	kidney:	embryo
46	chr12:822286-822336	HAEpiC	amniotic membrane:	n/a
47	chr12:822286-822336	BE2_C	brain:	n/a
48	chr12:822286-822336	U87	brain:	n/a
49	chr12:822286-822336	AG10803	skin:	n/a
50	chr12:822286-822336	ovcar-3	ovarian:	n/a

(count:46 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr12:832284..837801-chr12:858821..863136,6	MCF-7	breast:
2	chr12:827548..829684-chr12:835280..837166,2	K562	blood:
3	chr12:838287..839811-chr12:861670..863793,2	MCF-7	breast:
4	chr12:840064..842730-chr12:846246..849021,2	K562	blood:
5	chr12:818532..821331-chr12:822970..825882,2	K562	blood:
6	chr12:851908..854303-chr12:860165..862567,2	MCF-7	breast:
7	chr12:822480..827590-chr12:828895..833906,6	K562	blood:
8	chr12:686859..689615-chr12:851283..853925,2	MCF-7	breast:
9	chr12:846228..849127-chr12:859714..862580,3	K562	blood:
10	chr12:852835..854793-chr12:856754..858401,2	K562	blood:
11	chr12:846994..850450-chr12:851888..854645,3	K562	blood:
12	chr12:751811..754307-chr12:785925..788890,4	MCF-7	breast:
13	chr12:824394..827351-chr12:860045..863016,2	K562	blood:
14	chr12:840064..842730-chr12:846246..849021,2	K562	blood:
15	chr12:831922..833728-chr12:837202..839167,2	K562	blood:
16	chr12:751484..754177-chr12:833162..836032,2	MCF-7	breast:
17	chr12:831922..833728-chr12:837202..839167,2	K562	blood:
18	chr12:795680..800126-chr12:801859..804463,4	K562	blood:
19	chr12:845151..847111-chr12:848367..852019,3	MCF-7	breast:
20	chr12:849337..852194-chr12:853558..856397,3	K562	blood:
21	chr12:845525..848174-chr12:852039..854517,2	MCF-7	breast:
22	chr12:784539..786532-chr12:803214..805167,2	K562	blood:
23	chr12:825603..828799-chr12:857363..861650,3	K562	blood:
24	chr12:846994..850450-chr12:851888..854645,3	K562	blood:
25	chr12:845023..848202-chr12:862758..865349,3	MCF-7	breast:
26	chr12:851480..853426-chr12:857104..859711,2	K562	blood:
27	chr12:827548..829684-chr12:835280..837166,2	K562	blood:
28	chr12:772404..773384-chr12:833982..834793,3	MCF-7	breast:
29	chr12:752374..754889-chr12:785771..788046,2	K562	blood:
30	chr12:752093..753757-chr12:830716..833121,2	K562	blood:
31	chr12:852622..854138-chr12:861465..863283,2	K562	blood:
32	chr12:845151..847111-chr12:848367..852019,3	MCF-7	breast:
33	chr12:795680..800126-chr12:801859..804463,4	K562	blood:
34	chr12:831910..837502-chr12:858732..864374,10	MCF-7	breast:
35	chr12:845525..848174-chr12:852039..854517,2	MCF-7	breast:
36	chr12:822480..827590-chr12:828895..833906,6	K562	blood:
37	chr12:754920..757056-chr12:790543..792765,2	K562	blood:
38	chr12:751010..752994-chr12:848617..851185,2	MCF-7	breast:
39	chr12:833323..835547-chr12:862208..864227,2	K562	blood:
40	chr12:706228..706766-chr12:833972..834573,2	MCF-7	breast:
41	chr12:808962..809943-chr2:114147779..114148497,2	MCF-7	breast:
42	chr12:824399..827215-chr12:865443..868265,2	K562	blood:
43	chr12:818532..821331-chr12:822970..825882,2	K562	blood:
44	chr12:739580..743706-chr12:833762..836788,5	MCF-7	breast:
45	chr12:849337..852194-chr12:853558..856397,3	K562	blood:
46	chr12:772635..775511-chr12:804451..806232,2	MCF-7	breast:

(count:6 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-WNK1-1	chr12:812115-812164	XLOC_009614
2	lnc-WNK1-1	chr12:820141-820278	XLOC_009614
3	lnc-WNK1-1	chr12:799000-799203	XLOC_009614
4	lnc-WNK1-1	chr12:837176-837499	XLOC_009614
5	lnc-NINJ2-1	chr12:790918-791061	ENSG00000256672
6	lnc-NINJ2-1	chr12:793161-793293	ENSG00000256672

No data

Variant related genes	Relation type
ENSG00000256672	TF binding region
ENSG00000256672	CpG island
ENSG00000171840	chromatin interactions
ENSG00000177406	chromatin interactions
ENSG00000060237	chromatin interactions

Extended variants
information (count: 2726 )
Associated
traits (count: 83 )

Variant overlapped rSNPs/rCNVs (count:2726 , 50 per page) page: 1 2 3 4 5 6 7 ... 55

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs141177455	chr12:786580-786581	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
2	rs544674652	chr12:786611-786612	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
3	rs143188449	chr12:786612-786613	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
4	rs547510505	chr12:786615-786616	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
5	rs558062147	chr12:786658-786659	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
6	rs151222051	chr12:786673-786674	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
7	rs533761960	chr12:786738-786739	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
8	rs560706900	chr12:786745-786746	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
9	rs117171952	chr12:786762-786763	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
10	rs115504471	chr12:786800-786801	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
11	rs34951622	chr12:786807-786808	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
12	rs114495381	chr12:786881-786882	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
13	rs34253148	chr12:786905-786906	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
14	rs397796359	chr12:786906-786907	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
15	rs7309570	chr12:786907-786908	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
16	rs77824540	chr12:786923-786924	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
17	rs563877653	chr12:786928-786929	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
18	rs575409097	chr12:787014-787015	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
19	rs550180946	chr12:787081-787082	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
20	rs546020690	chr12:787170-787171	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
21	rs531844951	chr12:787212-787213	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
22	rs146281061	chr12:787213-787214	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
23	rs567002695	chr12:787228-787229	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
24	rs146995161	chr12:787233-787234	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
25	rs71441847	chr12:787234-787235	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
26	rs564427778	chr12:787245-787246	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
27	rs528809092	chr12:787257-787258	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
28	rs540576048	chr12:787262-787263	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
29	rs561951210	chr12:787283-787284	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
30	rs568362142	chr12:787298-787299	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
31	rs12311934	chr12:787310-787311	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
32	rs568631321	chr12:787339-787340	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
33	rs377278369	chr12:787341-787342	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
34	rs138039232	chr12:787362-787363	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
35	rs143543813	chr12:787424-787425	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
36	rs553861530	chr12:787463-787464	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
37	rs145833240	chr12:787487-787488	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
38	rs58065840	chr12:787529-787530	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
39	rs71051372	chr12:787532-787533	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
40	rs551643047	chr12:787548-787549	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
41	rs58582478	chr12:787555-787556	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
42	rs375661365	chr12:787556-787557	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
43	rs145969986	chr12:787560-787561	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
44	rs149982494	chr12:787566-787567	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
45	rs10849458	chr12:787578-787579	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
46	rs533852460	chr12:787579-787580	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
47	rs368520928	chr12:787589-787590	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
48	rs80056984	chr12:787607-787608	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
49	rs138668721	chr12:787621-787622	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
50	rs537872551	chr12:787679-787680	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:83)

Disease	PMID	Source
Cancer	20164920	CNVD
Myelofibrosis	22110671	CNVD
Non-syndromic sensorineural hearing loss	19587683	CNVD
Glaucoma	21310917	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Malignant peripheral nerve sheath tumor	19844265	CNVD
Squamous cell cancer	19607727	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Hepatocellular carcinoma	16750200	CNVD
Breast cancer	17133270	CNVD
Esophageal squamous carcinoma	18405350	CNVD
Mental retardation	17847001	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
abnormal development	18461090	CNVD
Ovarian cancer	20844748	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Medulloblastoma	16968546	CNVD
Ovine squamous-cell carcinoma	17599052	CNVD
T-cell acute lymphoblastic leukemia	20065082	CNVD
Breast cancer	22032731	CNVD
Cancer	21183584	CNVD
Myxofibrosarcoma	16751306	CNVD
Non-small cell lung cancer	21829676	CNVD
Ovarian neoplasms	16753589	CNVD
Prostate cancer	21965145	CNVD
Acute myeloid leukemia	16864856	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Disorders of sex development	21048976	CNVD
Glioblastoma multiforme	21080181	CNVD
Liposarcoma	21253554	CNVD
Prostate cancer	19156837	CNVD
Emphysema	19352772	CNVD
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	17053054	CNVD
Malignant germ cell tumour	17285132	CNVD
Melanoma	18172304	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Wilms tumour	21544195	CNVD
Squamous cell cancer	21044232	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	19960244	CNVD
Endometrial cancer	22040021	CNVD
Colorectal cancer	20709793	CNVD
Breast cancer	21264507	CNVD
Cancer	16751803	CNVD
Testicular cancer	18059402	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Seminomas	18059402	CNVD
Esophageal cancer	21851588	CNVD
Lung cancer	20668451	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Testicular germ cell tumor	18059402	CNVD
Malaria	21533027	CNVD
Chronic lymphocytic leukemia	22228453	CNVD
small cell lung cancer	20016488	CNVD
Chronic lymphocytic leukemia	21670202	CNVD
Breast cancer	21364760	CNVD
Developmental delay	21147756	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Ewing''s sarcoma	17952124	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Acute myeloid leukemia	20729466	CNVD
Breast cancer	21858162	CNVD
Breast cancer	21509527	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21785460	CNVD
Ovarian cancer	21720365	CNVD
Myelodysplastic syndrome	21251322	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Pleomorphic liposarcoma	18784837	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Pancreatic cancer	17952125	CNVD
Cancer	20164919	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:1129 , 50 per page) page: 1 2 3 4 5 6 7 ... 23

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:772800-786600	Enhancers	Fetal Thymus	thymus
2	chr12:777000-788000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr12:783800-788000	Weak transcription	Brain Hippocampus Middle	brain
4	chr12:783800-788000	Weak transcription	Brain Substantia Nigra	brain
5	chr12:783800-793200	Weak transcription	Fetal Muscle Leg	muscle
6	chr12:784200-786600	Enhancers	Primary T helper cells PMA-I stimulated	--
7	chr12:784400-787800	Weak transcription	Primary T killer memory cells from peripheral blood	blood
8	chr12:784400-788000	Weak transcription	Primary T helper naive cells from peripheral blood	blood
9	chr12:784400-788000	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
10	chr12:784400-788000	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
11	chr12:784400-788000	Weak transcription	Monocytes-CD14+_RO01746	blood
12	chr12:784400-794000	Weak transcription	Thymus	Thymus
13	chr12:784400-795000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
14	chr12:784600-786600	Enhancers	Liver	Liver
15	chr12:784600-787600	Weak transcription	Primary B cells from peripheral blood	blood
16	chr12:785000-793000	Weak transcription	Primary T cells from cord blood	blood
17	chr12:785000-793400	Weak transcription	Primary hematopoietic stem cells	blood
18	chr12:785000-793400	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
19	chr12:785000-794000	Weak transcription	Primary monocytes fromperipheralblood	blood
20	chr12:785200-787800	Weak transcription	Primary neutrophils fromperipheralblood	blood
21	chr12:785200-787800	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
22	chr12:785200-788000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
23	chr12:785200-788600	Weak transcription	Brain Anterior Caudate	brain
24	chr12:785400-786600	Enhancers	Fetal Heart	heart
25	chr12:785800-786800	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
26	chr12:785800-786800	Enhancers	Primary T helper cells fromperipheralblood	blood
27	chr12:786000-786800	Flanking Active TSS	GM12878-XiMat	blood
28	chr12:786200-786600	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
29	chr12:786200-786600	Enhancers	Primary hematopoietic stem cells short term culture	blood
30	chr12:786200-788800	Enhancers	Primary T cells fromperipheralblood	blood
31	chr12:786200-801000	Weak transcription	Right Ventricle	heart
32	chr12:786400-787600	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
33	chr12:786400-793800	Weak transcription	Left Ventricle	heart
34	chr12:786600-787600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
35	chr12:786600-788000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
36	chr12:786600-788000	Weak transcription	Primary T helper cells PMA-I stimulated	--
37	chr12:786600-793200	Weak transcription	Fetal Heart	heart
38	chr12:786800-787600	Enhancers	GM12878-XiMat	blood
39	chr12:786800-788200	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
40	chr12:787600-787800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
41	chr12:787600-788200	Enhancers	Primary hematopoietic stem cells short term culture	blood
42	chr12:787600-788400	Enhancers	Primary B cells from peripheral blood	blood
43	chr12:787600-788800	Flanking Active TSS	GM12878-XiMat	blood
44	chr12:787800-788400	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
45	chr12:787800-788400	Enhancers	Primary neutrophils fromperipheralblood	blood
46	chr12:787800-788400	Enhancers	Primary T killer memory cells from peripheral blood	blood
47	chr12:787800-788600	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
48	chr12:787800-789200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
49	chr12:788000-788200	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
50	chr12:788000-788200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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