Variant report

Variant	nsv541480
Chromosome Location	chr12:39898349-40245401
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:2468)
CpG islands
(count:1160)
Chromatin interactive
region (count:70)
LncRNA
region (count:6)
Mature miRNA
region (count: 0)
miRNA target
sites (count:1)

(count:2468 , 50 per page) page: 1 2 3 4 5 6 7 ... 50

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr12:39932499-39932672	K562	blood:	n/a	n/a
2	ARID3A	chr12:40067214-40067268	K562	blood:	n/a	n/a
3	ARID3A	chr12:40199534-40199560	K562	blood:	n/a	n/a
4	ARID3A	chr12:39941824-39941979	HepG2	liver:	n/a	n/a
5	ARID3A	chr12:40019707-40020121	K562	blood:	n/a	n/a
6	ARID3A	chr12:40200982-40201260	K562	blood:	n/a	n/a
7	ARID3A	chr12:40225811-40226081	K562	blood:	n/a	n/a
8	ARID3A	chr12:39928847-39929140	K562	blood:	n/a	n/a
9	ARID3A	chr12:39986074-39986631	HepG2	liver:	n/a	n/a
10	ARID3A	chr12:39928840-39929108	HepG2	liver:	n/a	n/a
11	ARID3A	chr12:40225740-40226084	HepG2	liver:	n/a	n/a
12	ATF1	chr12:39932360-39932733	K562	blood:	n/a	n/a
13	ATF1	chr12:40233006-40233117	K562	blood:	n/a	n/a
14	ATF1	chr12:40107344-40107573	K562	blood:	n/a	n/a
15	ATF1	chr12:40017728-40018001	K562	blood:	n/a	n/a
16	ATF1	chr12:40106808-40106910	K562	blood:	n/a	n/a
17	ATF2	chr12:40013030-40014309	GM12878	blood:	n/a	n/a
18	ATF2	chr12:40015033-40015558	GM12878	blood:	n/a	n/a
19	ATF2	chr12:40014910-40015547	GM12878	blood:	n/a	n/a
20	ATF2	chr12:40017642-40018058	GM12878	blood:	n/a	n/a
21	ATF2	chr12:40229614-40229974	GM12878	blood:	n/a	n/a
22	ATF2	chr12:40013016-40014468	GM12878	blood:	n/a	n/a
23	ATF2	chr12:40017634-40018151	GM12878	blood:	n/a	n/a
24	ATF2	chr12:40011528-40012131	GM12878	blood:	n/a	n/a
25	ATF3	chr12:39932340-39932621	K562	blood:	n/a	n/a
26	ATF3	chr12:39932440-39932668	K562	blood:	n/a	n/a
27	BACH1	chr12:39917491-39917517	H1-hESC	embryonic stem cell:	n/a	n/a
28	BATF	chr12:40013610-40014176	GM12878	blood:	n/a	n/a
29	BATF	chr12:40015177-40015564	GM12878	blood:	n/a	chr12:40015361-40015369
30	BATF	chr12:40229548-40229926	GM12878	blood:	n/a	n/a
31	BATF	chr12:40229525-40229935	GM12878	blood:	n/a	n/a
32	BCL11A	chr12:40013691-40014229	GM12878	blood:	n/a	n/a
33	BCL11A	chr12:40015067-40015497	GM12878	blood:	n/a	n/a
34	BCL11A	chr12:40015148-40015466	GM12878	blood:	n/a	n/a
35	BCL11A	chr12:40013743-40014155	GM12878	blood:	n/a	n/a
36	BCL11A	chr12:40229655-40229889	GM12878	blood:	n/a	n/a
37	BCLAF1	chr12:40012903-40014227	GM12878	blood:	n/a	chr12:40013531-40013540
38	BCLAF1	chr12:40013103-40014371	GM12878	blood:	n/a	chr12:40013531-40013540
39	BCLAF1	chr12:40015092-40015585	GM12878	blood:	n/a	n/a
40	BCLAF1	chr12:40014878-40015503	GM12878	blood:	n/a	n/a
41	BCLAF1	chr12:40011639-40012238	GM12878	blood:	n/a	chr12:40011861-40011870
42	BHLHE40	chr12:39981193-39981375	GM12878	blood:	n/a	n/a
43	BHLHE40	chr12:40200931-40201073	K562	blood:	n/a	n/a
44	BHLHE40	chr12:40019763-40020115	K562	blood:	n/a	n/a
45	BHLHE40	chr12:40013084-40014481	GM12878	blood:	n/a	n/a
46	BHLHE40	chr12:40013332-40013847	K562	blood:	n/a	n/a
47	BHLHE40	chr12:40011766-40012044	GM12878	blood:	n/a	n/a
48	BHLHE40	chr12:39932517-39932577	K562	blood:	n/a	n/a
49	BHLHE40	chr12:40229588-40229877	GM12878	blood:	n/a	n/a
50	BHLHE40	chr12:40214181-40214238	K562	blood:	n/a	n/a

(count:1160 , 50 per page) page: 1 2 3 4 5 6 7 ... 24

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr12:40019907-40019957	A549	lung:	n/a
2	chr12:40019907-40019957	A549	lung:	n/a
3	chr12:40019919-40019969	GM12878	blood:	n/a
4	chr12:40013961-40014011	HCF	heart:	n/a
5	chr12:40014292-40014342	U87	brain:	n/a
6	chr12:39981136-39981186	PrEC	prostate:	n/a
7	chr12:40014292-40014342	SK-N-SH_RA	brain:	n/a
8	chr12:40197081-40197131	NHBE	bronchial:	n/a
9	chr12:40019532-40019582	MCF10A-Er-Src	breast:	n/a
10	chr12:40146787-40146837	HL-60	blood:	n/a
11	chr12:39932673-39932723	HCT-116	colon:	n/a
12	chr12:40146787-40146837	HCT-116	colon:	n/a
13	chr12:40019532-40019582	SAEC	small airway:	n/a
14	chr12:40197081-40197131	HUVEC	blood vessel:	n/a
15	chr12:40020000-40020050	ovcar-3	ovarian:	n/a
16	chr12:40019768-40019818	PANC-1	pancreas:	n/a
17	chr12:40014292-40014342	AG09309	skin:	n/a
18	chr12:40013596-40013646	RPTEC	kidney:	n/a
19	chr12:39981136-39981186	MCF-7	breast:	n/a
20	chr12:40197081-40197131	HepG2	liver:	n/a
21	chr12:40019532-40019582	HepG2	liver:	n/a
22	chr12:39932673-39932723	LNCaP	prostate:	n/a
23	chr12:40020078-40020128	HCF	heart:	n/a
24	chr12:40197081-40197131	H1-hESC	embryonic stem cell:	embryo
25	chr12:40013596-40013646	CMK	blood:	n/a
26	chr12:40013961-40014011	HRCEpiC	kidney:	n/a
27	chr12:40020078-40020128	SK-N-SH	brain:	n/a
28	chr12:39981136-39981186	NH-A	brain:	n/a
29	chr12:40013596-40013646	MCF10A-Er-Src	breast:	n/a
30	chr12:40146787-40146837	NH-A	brain:	n/a
31	chr12:40020078-40020128	SKMC	muscle:	n/a
32	chr12:40019919-40019969	AG09319	gingival:	n/a
33	chr12:40019532-40019582	HEEpiC	esophagus:	n/a
34	chr12:40146787-40146837	HEK293	kidney:	embryo
35	chr12:40013961-40014011	SK-N-MC	brain:	n/a
36	chr12:40019907-40019957	PANC-1	pancreas:	n/a
37	chr12:40020000-40020050	CMK	blood:	n/a
38	chr12:40014132-40014182	HRCEpiC	kidney:	n/a
39	chr12:40093094-40093144	ProgFib	skin:	n/a
40	chr12:40020000-40020050	SAEC	small airway:	n/a
41	chr12:40146787-40146837	HNPCEpiC	eye:	n/a
42	chr12:40019907-40019957	AoSMC	blood vessel:	n/a
43	chr12:40093087-40093137	ovcar-3	ovarian:	n/a
44	chr12:40020000-40020050	HEEpiC	esophagus:	n/a
45	chr12:40093094-40093144	NT2-D1	testis:	n/a
46	chr12:40093087-40093137	SAEC	small airway:	n/a
47	chr12:40013680-40013730	GM12878	blood:	n/a
48	chr12:39932673-39932723	Hela-S3	cervix:	n/a
49	chr12:40013596-40013646	HEK293	kidney:	embryo
50	chr12:40093094-40093144	Hela-S3	cervix:	n/a

(count:70 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr12:40006374..40007995-chr12:40011197..40013165,2	K562	blood:
2	chr12:40158494..40159394-chr12:40706485..40707345,2	MCF-7	breast:
3	chr12:40157295..40160338-chr12:40499150..40502228,3	MCF-7	breast:
4	chr12:39933714..39935696-chr12:39937326..39938975,2	K562	blood:
5	chr12:39998727..40000314-chr12:40002624..40004346,2	MCF-7	breast:
6	chr12:40205089..40207164-chr12:40209269..40211220,2	K562	blood:
7	chr12:40158520..40159448-chr12:40546284..40547792,5	MCF-7	breast:
8	chr12:40015362..40017426-chr12:40020461..40022505,2	MCF-7	breast:
9	chr12:39835315..39837704-chr12:39933049..39935834,3	K562	blood:
10	chr12:39935467..39937094-chr12:40451858..40454102,2	K562	blood:
11	chr12:40065514..40066416-chr12:107873474..107874173,2	MCF-7	breast:
12	chr12:40010562..40012556-chr12:40014262..40016328,2	K562	blood:
13	chr12:40012703..40015318-chr12:40031815..40033811,2	K562	blood:
14	chr12:40041383..40044331-chr12:40082931..40085850,2	K562	blood:
15	chr12:40233400..40236371-chr12:40236570..40239035,2	MCF-7	breast:
16	chr12:40015362..40017426-chr12:40020461..40022505,2	MCF-7	breast:
17	chr12:40158540..40159495-chr12:40351942..40352752,5	MCF-7	breast:
18	chr12:40161730..40164453-chr12:40368546..40370092,2	K562	blood:
19	chr12:39759019..39759794-chr12:39928934..39929706,2	MCF-7	breast:
20	chr12:40158518..40159407-chr12:40501012..40501936,2	K562	blood:
21	chr12:40239652..40241691-chr12:40246024..40247653,2	K562	blood:
22	chr12:39923283..39924803-chr12:39931184..39934031,2	K562	blood:
23	chr12:40218165..40218758-chr12:40352165..40352674,2	MCF-7	breast:
24	chr12:40155001..40155717-chr12:40243633..40244224,2	MCF-7	breast:
25	chr12:40224533..40225359-chr12:40351916..40352430,2	MCF-7	breast:
26	chr12:40041383..40044331-chr12:40082931..40085850,2	K562	blood:
27	chr12:40158493..40159396-chr12:40384037..40384925,5	MCF-7	breast:
28	chr12:39834094..39836682-chr12:39930769..39933635,3	K562	blood:
29	chr12:40011374..40014177-chr12:40021729..40023684,2	MCF-7	breast:
30	chr12:40150704..40153291-chr12:40154955..40157099,2	K562	blood:
31	chr12:40155001..40155717-chr12:40243633..40244224,2	MCF-7	breast:
32	chr12:39834926..39838075-chr12:39898307..39900451,3	MCF-7	breast:
33	chr12:40205089..40207164-chr12:40209269..40211220,2	K562	blood:
34	chr12:40014171..40017168-chr12:40017549..40021409,3	K562	blood:
35	chr12:40154707..40156485-chr12:40189200..40190990,2	MCF-7	breast:
36	chr12:39998727..40000314-chr12:40002624..40004346,2	MCF-7	breast:
37	chr12:40006374..40007995-chr12:40011197..40013165,2	K562	blood:
38	chr12:40008067..40010229-chr12:40012504..40015238,3	K562	blood:
39	chr12:40210443..40213625-chr12:40221266..40224503,3	K562	blood:
40	chr12:40210443..40213625-chr12:40221266..40224503,3	K562	blood:
41	chr12:39711735..39712649-chr12:40077357..40078312,2	K562	blood:
42	chr12:40223815..40226174-chr12:40498333..40500585,2	MCF-7	breast:
43	chr12:39836470..39838324-chr12:39927543..39930505,2	MCF-7	breast:
44	chr12:40199999..40202917-chr12:40210641..40213494,3	K562	blood:
45	chr12:39926553..39928856-chr12:39931123..39933872,2	K562	blood:
46	chr12:40199999..40202917-chr12:40210641..40213494,2	K562	blood:
47	chr12:40005732..40008128-chr12:40008934..40010953,2	K562	blood:
48	chr12:40154023..40155558-chr12:40243257..40245766,2	MCF-7	breast:
49	chr12:40165086..40168049-chr12:40212824..40214791,2	MCF-7	breast:
50	chr12:40195514..40197262-chr12:40498609..40500773,2	MCF-7	breast:

(count:6 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-C12orf40-1	chr12:39940682-39942476	NONHSAT027707
2	lnc-LRRK2-2	chr12:40035446-40035663	uc_337_+
3	lnc-ABCD2-2	chr12:39933383-39933653	NONHSAT027706
4	lnc-ABCD2-4	chr12:40148896-40150095	NONHSAT027710
5	lnc-ABCD2-3	chr12:40035446-40035663	uc_337_-
6	lnc-C12orf40-1	chr12:39942705-39943943	NONHSAT027707

No data

(count:1 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location	mirBase accession
1	C12orf40	hsa-miR-1	chr12:40076763-40076785

Variant related genes	Relation type
C12orf40	TF binding region
ENSG00000270273	TF binding region
ENSG00000223082	TF binding region
ABCD2	TF binding region
ENSG00000199571	TF binding region
SLC2A13	TF binding region
C12orf40	CpG island
ENSG00000270273	CpG island
ENSG00000223082	CpG island
ABCD2	CpG island
ENSG00000199571	CpG island
SLC2A13	CpG island
ENSG00000270273	chromatin interactions
ENSG00000180116	chromatin interactions
ENSG00000199571	chromatin interactions
ENSG00000188906	chromatin interactions
ENSG00000252974	chromatin interactions
ENSG00000173208	chromatin interactions
ENSG00000139116	chromatin interactions
ENSG00000151229	chromatin interactions
ENSG00000223082	chromatin interactions

Extended variants
information (count: 10584 )
Associated
traits (count: 61 )

Variant overlapped rSNPs/rCNVs (count:10584 , 50 per page) page: 1 2 3 4 5 6 7 ... 212

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs186821246	chr12:39898363-39898364	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
2	rs190445401	chr12:39898369-39898370	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
3	rs181977546	chr12:39898370-39898371	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
4	rs112903695	chr12:39898372-39898373	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
5	rs549715319	chr12:39898437-39898438	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
6	rs549141605	chr12:39898447-39898448	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
7	rs74086569	chr12:39898470-39898471	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
8	rs528302212	chr12:39898517-39898518	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
9	rs567920193	chr12:39898522-39898523	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
10	rs186256429	chr12:39898526-39898527	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
11	rs143381553	chr12:39898651-39898652	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
12	rs146715153	chr12:39898657-39898658	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
13	rs140306173	chr12:39898679-39898680	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
14	rs144028794	chr12:39898680-39898681	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
15	rs570792761	chr12:39898681-39898682	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
16	rs545914666	chr12:39898683-39898684	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
17	rs146437709	chr12:39898684-39898685	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
18	rs77752135	chr12:39898695-39898696	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
19	rs189883894	chr12:39898789-39898790	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
20	rs140696254	chr12:39898806-39898807	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
21	rs182225797	chr12:39898808-39898809	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
22	rs150077114	chr12:39898810-39898811	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
23	rs554082913	chr12:39898820-39898821	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
24	rs577160978	chr12:39898844-39898845	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
25	rs544604184	chr12:39898918-39898919	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
26	rs562974481	chr12:39898952-39898953	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
27	rs574981843	chr12:39898970-39898971	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
28	rs187677941	chr12:39898972-39898973	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
29	rs191266207	chr12:39899032-39899033	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
30	rs183126069	chr12:39899043-39899044	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
31	rs79604256	chr12:39899078-39899079	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
32	rs368289747	chr12:39899080-39899081	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
33	rs565166162	chr12:39899125-39899126	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
34	rs138328813	chr12:39899130-39899131	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
35	rs3923944	chr12:39899132-39899133	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
36	rs371936323	chr12:39899165-39899166	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
37	rs188510196	chr12:39899184-39899185	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
38	rs530130033	chr12:39899208-39899209	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
39	rs554471666	chr12:39899221-39899222	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
40	rs111740125	chr12:39899259-39899260	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
41	rs149210643	chr12:39899279-39899280	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
42	rs372602813	chr12:39899317-39899318	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
43	rs534123595	chr12:39899343-39899344	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
44	rs558774875	chr12:39899357-39899358	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
45	rs377306470	chr12:39899384-39899385	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
46	rs570790844	chr12:39899423-39899424	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
47	rs541439289	chr12:39899477-39899478	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
48	rs146799516	chr12:39899545-39899546	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
49	rs192063715	chr12:39899582-39899583	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
50	rs574862374	chr12:39899608-39899609	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:61)

Disease	PMID	Source
Chronic lymphocytic leukemia	21546498	CNVD
Seminomas	18059402	CNVD
Wilms tumour	21544195	CNVD
Esophageal cancer	21851588	CNVD
Lung cancer	20668451	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Ewing''s sarcoma	21437220	CNVD
Testicular germ cell tumor	18059402	CNVD
Medulloblastoma	21979893	CNVD
Malaria	21533027	CNVD
Chronic lymphocytic leukemia	22228453	CNVD
Basal cell lymphoma	17053054	CNVD
Chronic lymphocytic leukemia	21670202	CNVD
Ewing''s sarcoma	17952124	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Autism	22495311	CNVD
Cancer	20164919	CNVD
Neurodevelopmental disorder	22521361	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Renal cell carcinoma	18194544	CNVD
Breast cancer	21949216	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Acute myeloid leukemia	16864856	CNVD
Cancer	21637783	CNVD
Glioblastoma multiforme	21080181	CNVD
Renal cell carcinoma	19461508	CNVD
Burkitt''s lymphoma	18698080	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	17603634	CNVD
Cancer	21183584	CNVD
Hirschsprung''s Disease	21712996	CNVD
Lissencephaly	21572526	CNVD
Lung cancer	18438408	CNVD
Acute myeloid leukemia	21251322	CNVD
small cell lung cancer	20016488	CNVD
Autism	20858243	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Breast cancer	19602461	CNVD
Breast cancer	17899364	CNVD
Cancer	20164920	CNVD
Colorectal cancer	16272173	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Osteosarcoma	21215367	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Breast cancer	21364760	CNVD
Pancreatic cancer	17952125	CNVD

Chromatin state (count:1738 , 50 per page) page: 1 2 3 4 5 6 7 ... 35

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:39895800-39899400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr12:39897000-39898800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
3	chr12:39897200-39898400	Weak transcription	Cortex derived primary cultured neurospheres	brain
4	chr12:39897400-39898800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
5	chr12:39897600-39898600	Weak transcription	HMEC	breast
6	chr12:39897600-39900400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
7	chr12:39897800-39899400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
8	chr12:39898000-39898400	Weak transcription	Muscle Satellite Cultured Cells	--
9	chr12:39898000-39899200	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
10	chr12:39898200-39898600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
11	chr12:39898400-39898600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
12	chr12:39898400-39899000	Enhancers	Cortex derived primary cultured neurospheres	brain
13	chr12:39898400-39899200	Enhancers	Muscle Satellite Cultured Cells	--
14	chr12:39898600-39899000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
15	chr12:39898600-39899200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
16	chr12:39898800-39899000	Enhancers	iPS-18 Cell Line	embryonic stem cell
17	chr12:39898800-39899000	Enhancers	HMEC	breast
18	chr12:39898800-39899200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
19	chr12:39899200-39902200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
20	chr12:39899200-39903800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
21	chr12:39900400-39900600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
22	chr12:39903800-39906400	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
23	chr12:39905400-39905800	Bivalent Enhancer	iPS-18 Cell Line	embryonic stem cell
24	chr12:39914200-39915400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
25	chr12:39925000-39925400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
26	chr12:39925000-39925600	Enhancers	Adipose Nuclei	Adipose
27	chr12:39925400-39925800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
28	chr12:39925800-39926000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
29	chr12:39926000-39934600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
30	chr12:39932200-39933800	Active TSS	K562	blood
31	chr12:39932800-39933200	Enhancers	Fetal Heart	heart
32	chr12:39933000-39933800	Enhancers	HUES6 Cell Line	embryonic stem cell
33	chr12:39933000-39933800	Enhancers	iPS-15b Cell Line	embryonic stem cell
34	chr12:39933200-39933400	Enhancers	ES-I3 Cell Line	embryonic stem cell
35	chr12:39933200-39933600	Enhancers	H9 Cell Line	embryonic stem cell
36	chr12:39933200-39933600	Enhancers	HUES64 Cell Line	embryonic stem cell
37	chr12:39933200-39934000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
38	chr12:39933800-39934800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
39	chr12:39933800-39935400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
40	chr12:39934000-39935000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
41	chr12:39934600-39935000	Enhancers	Adipose Nuclei	Adipose
42	chr12:39934600-39936000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
43	chr12:39935000-39935600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
44	chr12:39935400-39946400	Weak transcription	Primary T cells fromperipheralblood	blood
45	chr12:39936000-39945800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
46	chr12:39938800-39951000	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
47	chr12:39939800-39950800	Weak transcription	Primary T cells from cord blood	blood
48	chr12:39941400-39949600	Weak transcription	Adipose Nuclei	Adipose
49	chr12:39942600-39951600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
50	chr12:39943600-39945200	Weak transcription	Primary T helper cells fromperipheralblood	blood

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