Variant report

Variant	nsv541772
Chromosome Location	chr13:50218255-50264414
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:977)
CpG islands
(count:367)
Chromatin interactive
region (count:39)
LncRNA
region (count:1)
Mature miRNA
region (count: 0)
miRNA target
sites (count:1)

(count:977 , 50 per page) page: 1 2 3 4 5 6 7 ... 20

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr13:50264292-50264781	HepG2	liver:	n/a	n/a
2	ARID3A	chr13:50226859-50227149	HepG2	liver:	n/a	n/a
3	ATF2	chr13:50257619-50257999	GM12878	blood:	n/a	n/a
4	ATF2	chr13:50257638-50258102	GM12878	blood:	n/a	n/a
5	BATF	chr13:50257626-50258026	GM12878	blood:	n/a	chr13:50257804-50257815 chr13:50257785-50257796
6	BATF	chr13:50257667-50258013	GM12878	blood:	n/a	chr13:50257804-50257815 chr13:50257785-50257796
7	BHLHE40	chr13:50257702-50257935	GM12878	blood:	n/a	n/a
8	BHLHE40	chr13:50243874-50244206	GM12878	blood:	n/a	n/a
9	BRCA1	chr13:50223472-50223774	H1-hESC	embryonic stem cell:	n/a	n/a
10	BRCA1	chr13:50264287-50264656	Hela-S3	cervix:	n/a	n/a
11	BRCA1	chr13:50243877-50244197	H1-hESC	embryonic stem cell:	n/a	n/a
12	CEBPB	chr13:50262786-50262885	K562	blood:	n/a	n/a
13	CEBPB	chr13:50264278-50265134	Hela-S3	cervix:	n/a	n/a
14	CEBPB	chr13:50243994-50244478	H1-hESC	embryonic stem cell:	n/a	n/a
15	CEBPB	chr13:50264286-50264658	IMR90	lung:	n/a	n/a
16	CEBPB	chr13:50219711-50219884	HepG2	liver:	n/a	n/a
17	CEBPB	chr13:50227687-50227962	H1-hESC	embryonic stem cell:	n/a	chr13:50227798-50227809
18	CEBPB	chr13:50227790-50227913	K562	blood:	n/a	chr13:50227798-50227809
19	CEBPB	chr13:50243905-50244185	Hela-S3	cervix:	n/a	n/a
20	CEBPB	chr13:50224213-50224281	Hela-S3	cervix:	n/a	n/a
21	CEBPB	chr13:50264328-50264568	HepG2	liver:	n/a	n/a
22	CEBPB	chr13:50244278-50244529	K562	blood:	n/a	n/a
23	CEBPB	chr13:50264297-50264781	HepG2	liver:	n/a	n/a
24	CEBPB	chr13:50264243-50264723	A549	lung:	n/a	n/a
25	CEBPB	chr13:50244012-50244866	IMR90	lung:	n/a	chr13:50244760-50244773
26	CEBPB	chr13:50227700-50227906	A549	lung:	n/a	chr13:50227798-50227809
27	CEBPB	chr13:50227728-50227938	HepG2	liver:	n/a	chr13:50227798-50227809
28	CEBPB	chr13:50264347-50264648	MCF-7	breast:	n/a	n/a
29	CEBPB	chr13:50249181-50249371	HepG2	liver:	n/a	n/a
30	CEBPB	chr13:50224079-50224433	IMR90	lung:	n/a	n/a
31	CHD1	chr13:50243672-50244390	IMR90	lung:	n/a	n/a
32	CHD2	chr13:50243875-50244251	Hela-S3	cervix:	n/a	n/a
33	CHD2	chr13:50243939-50244180	HepG2	liver:	n/a	n/a
34	CHD2	chr13:50243876-50244223	H1-hESC	embryonic stem cell:	n/a	n/a
35	CHD2	chr13:50243892-50244225	GM12878	blood:	n/a	n/a
36	CHD2	chr13:50226996-50227073	Hela-S3	cervix:	n/a	n/a
37	CHD2	chr13:50243973-50244209	K562	blood:	n/a	n/a
38	CTCF	chr13:50226880-50227030	NHLF	lung:	n/a	n/a
39	CTCF	chr13:50243980-50244130	NHEK	skin:	n/a	chr13:50244024-50244042 chr13:50244026-50244047
40	CTCF	chr13:50243952-50244113	GM13976	blood:	n/a	chr13:50244024-50244042 chr13:50244026-50244047
41	CTCF	chr13:50223226-50223930	A549	lung:	n/a	n/a
42	CTCF	chr13:50253540-50253690	HBMEC	blood vessel:	n/a	chr13:50253590-50253597 chr13:50253588-50253609
43	CTCF	chr13:50253478-50253705	HepG2	liver:	n/a	chr13:50253590-50253597 chr13:50253588-50253609
44	CTCF	chr13:50253440-50253590	A549	lung:	n/a	n/a
45	CTCF	chr13:50226894-50227136	MCF-7	breast:	n/a	chr13:50227018-50227036 chr13:50227020-50227041
46	CTCF	chr13:50253480-50253630	GM12869	blood:	n/a	chr13:50253590-50253597 chr13:50253588-50253609
47	CTCF	chr13:50253560-50253710	GM12864	blood:	n/a	chr13:50253590-50253597 chr13:50253588-50253609
48	CTCF	chr13:50243960-50244110	GM12868	blood:	n/a	chr13:50244024-50244042 chr13:50244026-50244047
49	CTCF	chr13:50226927-50227119	A549	lung:	n/a	chr13:50227018-50227036 chr13:50227020-50227041
50	CTCF	chr13:50223478-50223664	Pancreas_OC	pancreas:	n/a	n/a

(count:367 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr13:50244794-50244844	HCPEpiC	choroid plexus:	n/a
2	chr13:50244794-50244844	HCPEpiC	choroid plexus:	n/a
3	chr13:50224704-50224754	PANC-1	pancreas:	n/a
4	chr13:50262883-50262933	NB4	blood:	n/a
5	chr13:50252631-50252681	BJ	skin:	n/a
6	chr13:50234944-50234994	GM12891	blood:	n/a
7	chr13:50262883-50262933	GM12892	blood:	n/a
8	chr13:50234944-50234994	NB4	blood:	n/a
9	chr13:50244794-50244844	HCT-116	colon:	n/a
10	chr13:50252564-50252614	HCT-116	colon:	n/a
11	chr13:50262883-50262933	HCT-116	colon:	n/a
12	chr13:50234944-50234994	PANC-1	pancreas:	n/a
13	chr13:50262883-50262933	LNCaP	prostate:	n/a
14	chr13:50252631-50252681	PrEC	prostate:	n/a
15	chr13:50234944-50234994	GM06990	blood:	n/a
16	chr13:50252564-50252614	NHBE	bronchial:	n/a
17	chr13:50252564-50252614	HRE	kidney:	n/a
18	chr13:50252631-50252681	NHDF-neo	bronchial:	n/a
19	chr13:50244794-50244844	HNPCEpiC	eye:	n/a
20	chr13:50234944-50234994	HIPEpiC	eye:	n/a
21	chr13:50262883-50262933	HEK293	kidney:	embryo
22	chr13:50252631-50252681	CMK	blood:	n/a
23	chr13:50262883-50262933	AG04449	skin:	fetal
24	chr13:50244794-50244844	BJ	skin:	n/a
25	chr13:50252631-50252681	IMR90	lung:	fetal
26	chr13:50234944-50234994	Caco-2	colon:	n/a
27	chr13:50252564-50252614	H1-hESC	embryonic stem cell:	embryo
28	chr13:50244794-50244844	GM19239	blood:	n/a
29	chr13:50224704-50224754	GM06990	blood:	n/a
30	chr13:50224704-50224754	HepG2	liver:	n/a
31	chr13:50252631-50252681	ProgFib	skin:	n/a
32	chr13:50262883-50262933	ovcar-3	ovarian:	n/a
33	chr13:50252631-50252681	SK-N-MC	brain:	n/a
34	chr13:50244794-50244844	AG09309	skin:	n/a
35	chr13:50244794-50244844	H1-hESC	embryonic stem cell:	embryo
36	chr13:50234944-50234994	HEK293	kidney:	embryo
37	chr13:50224704-50224754	HMEC	breast:	n/a
38	chr13:50252631-50252681	GM19239	blood:	n/a
39	chr13:50244794-50244844	HEK293	kidney:	embryo
40	chr13:50234944-50234994	HRE	kidney:	n/a
41	chr13:50224704-50224754	PrEC	prostate:	n/a
42	chr13:50262883-50262933	PFSK-1	brain:	n/a
43	chr13:50224704-50224754	SK-N-MC	brain:	n/a
44	chr13:50234944-50234994	HNPCEpiC	eye:	n/a
45	chr13:50234944-50234994	ECC-1	luminal epithelium:	n/a
46	chr13:50262883-50262933	MCF10A-Er-Src	breast:	n/a
47	chr13:50234944-50234994	AG09309	skin:	n/a
48	chr13:50234944-50234994	H1-hESC	embryonic stem cell:	embryo
49	chr13:50252631-50252681	PANC-1	pancreas:	n/a
50	chr13:50262883-50262933	MCF-7	breast:	n/a

(count:39 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr13:50244133..50245695-chr13:50352710..50354837,2	MCF-7	breast:
2	chr13:50261388..50263430-chr13:50264795..50266652,2	K562	blood:
3	chr13:50260531..50263061-chr13:50365546..50368292,2	K562	blood:
4	chr13:50263387..50266299-chr13:50365424..50368132,3	K562	blood:
5	chr13:50240420..50241989-chr13:50245723..50247987,2	MCF-7	breast:
6	chr13:50223077..50223615-chr13:50421808..50422802,2	K562	blood:
7	chr13:50241676..50244082-chr13:50249871..50252473,2	MCF-7	breast:
8	chr13:50258462..50260266-chr13:50263653..50266586,2	MCF-7	breast:
9	chr13:50217461..50219816-chr13:50222701..50225228,2	MCF-7	breast:
10	chr13:50261388..50262971-chr13:50264534..50266295,2	K562	blood:
11	chr13:50258208..50260676-chr13:50262902..50265227,2	K562	blood:
12	chr13:50245763..50247361-chr13:51482505..51484962,2	K562	blood:
13	chr13:50261767..50269137-chr13:50365068..50368535,12	MCF-7	breast:
14	chr13:50251639..50253630-chr13:50365412..50367568,2	MCF-7	breast:
15	chr13:50258208..50260676-chr13:50262902..50265227,2	K562	blood:
16	chr13:50240420..50241989-chr13:50245723..50247987,2	MCF-7	breast:
17	chr13:50226483..50227196-chr13:50421637..50422391,2	MCF-7	breast:
18	chr13:50224881..50227233-chr13:50228850..50231278,2	K562	blood:
19	chr13:50262508..50268089-chr13:50363531..50368771,13	MCF-7	breast:
20	chr13:50254223..50257561-chr13:50258855..50261948,4	K562	blood:
21	chr13:50254223..50257561-chr13:50258855..50261948,4	K562	blood:
22	chr13:50227490..50229830-chr13:50234207..50235813,2	K562	blood:
23	chr13:50243658..50244532-chr13:50421679..50422537,5	MCF-7	breast:
24	chr13:50227490..50229830-chr13:50234207..50235813,2	K562	blood:
25	chr13:50242666..50244239-chr13:50569416..50571466,2	MCF-7	breast:
26	chr13:50225733..50228016-chr13:50228850..50231289,2	K562	blood:
27	chr13:50219670..50221939-chr13:50262892..50264928,2	K562	blood:
28	chr13:50226990..50227524-chr13:50421888..50422595,3	K562	blood:
29	chr13:50252667..50256255-chr13:50260389..50264756,4	K562	blood:
30	chr13:50224881..50227233-chr13:50228850..50231278,2	K562	blood:
31	chr13:50251371..50253574-chr13:50364752..50368154,3	MCF-7	breast:
32	chr13:50243856..50246257-chr13:50421112..50423233,2	MCF-7	breast:
33	chr13:50225733..50228016-chr13:50228850..50231289,2	K562	blood:
34	chr13:50253326..50254069-chr13:50365169..50365855,3	MCF-7	breast:
35	chr13:50219670..50221939-chr13:50262892..50264928,2	K562	blood:
36	chr13:50263387..50265868-chr13:50365424..50368677,3	K562	blood:
37	chr13:50242498..50244504-chr13:50366051..50367551,2	MCF-7	breast:
38	chr13:50252667..50256255-chr13:50260389..50264756,4	K562	blood:
39	chr13:50217461..50219816-chr13:50222701..50225228,2	MCF-7	breast:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ARL11-4	chr13:50243040-50243254	NONHSAT033761

No data

(count:1 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location	mirBase accession
1	EBPL	hsa-miR-375	chr13:50234897-50234918

Variant related genes	Relation type
ENSG00000203547	TF binding region
ENSG00000203547	CpG island
ENSG00000233672	chromatin interactions
ENSG00000102753	chromatin interactions
ENSG00000123179	chromatin interactions
ENSG00000136104	chromatin interactions
ENSG00000204977	chromatin interactions
ENSG00000264864	chromatin interactions
ENSG00000203547	chromatin interactions

Extended variants
information (count: 1799 )
Associated
traits (count: 122 )

Variant overlapped rSNPs/rCNVs (count:1799 , 50 per page) page: 1 2 3 4 5 6 7 ... 36

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs535227585	chr13:50218257-50218258	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
2	rs185176304	chr13:50218266-50218267	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
3	rs568729994	chr13:50218276-50218277	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
4	rs188372500	chr13:50218303-50218304	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
5	rs181105495	chr13:50218323-50218324	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
6	rs575572777	chr13:50218378-50218379	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
7	rs546013234	chr13:50218439-50218440	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs186607660	chr13:50218464-50218465	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs367582705	chr13:50218487-50218488	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs577303274	chr13:50218542-50218543	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs142809574	chr13:50218585-50218586	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs538323859	chr13:50218605-50218606	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs147417647	chr13:50218677-50218678	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs539990300	chr13:50218678-50218679	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs139970559	chr13:50218736-50218737	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs145487401	chr13:50218808-50218809	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs74561575	chr13:50218811-50218812	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs562379680	chr13:50218825-50218826	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs532932315	chr13:50218840-50218841	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs372243938	chr13:50218863-50218864	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs551235246	chr13:50218935-50218936	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs191352436	chr13:50218986-50218987	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs528706105	chr13:50218987-50218988	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs377299401	chr13:50218988-50218989	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs144223384	chr13:50219055-50219056	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs117126480	chr13:50219185-50219186	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs148723055	chr13:50219187-50219188	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs577969224	chr13:50219188-50219189	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs534137509	chr13:50219213-50219214	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs142439346	chr13:50219220-50219221	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs74074799	chr13:50219247-50219248	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
32	rs148719966	chr13:50219277-50219278	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs146847881	chr13:50219301-50219302	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs542167046	chr13:50219312-50219313	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs151227396	chr13:50219313-50219314	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs183676016	chr13:50219397-50219398	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs186873346	chr13:50219407-50219408	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs190823442	chr13:50219415-50219416	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs1198388	chr13:50219448-50219449	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs183284619	chr13:50219449-50219450	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs533763229	chr13:50219450-50219451	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs555171990	chr13:50219454-50219455	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs573487996	chr13:50219460-50219461	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs112511039	chr13:50219524-50219525	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs562799595	chr13:50219525-50219526	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs577568664	chr13:50219551-50219552	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs541433452	chr13:50219566-50219567	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs186554418	chr13:50219595-50219596	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs12584003	chr13:50219599-50219600	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
50	rs191291756	chr13:50219600-50219601	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:122)

Disease	PMID	Source
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	21080181	CNVD
HIV/AIDS	22032296	CNVD
Prostate cancer	16705090	CNVD
High-proliferative meningiomas	17937814	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Cancer	20164919	CNVD
Autism	22495311	CNVD
Chordoma	21602918	CNVD
Bladder cancer	21949216	CNVD
Acute myeloid leukemia	16864856	CNVD
Burkitt''s lymphoma	18698080	CNVD
Cancer	21637783	CNVD
Medulloblastoma	21979893	CNVD
Chronic lymphocytic leukemia	21518781	CNVD
colon cancer	17210682	CNVD
Endometrial cancer	22040021	CNVD
Colorectal cancer	20709793	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Ovarian cancer	20844748	CNVD
Colorectal cancer	19359472	CNVD
Intracranial aneurysm	19064780	CNVD
Breast cancer	19287154	CNVD
Acute myeloid leukemia	18379011	CNVD
Human rectal carcinomas	16397240	CNVD
Olfactory neuroblastoma	18408657	CNVD
Multiple myeloma	17077331	CNVD
Ependymoma	16718352	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Colorectal cancer	16272173	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Squamous cell cancer	20885788	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Thyroid cancer	19087340	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Breast cancer	16608533	CNVD
Neuroblastoma	18923191	CNVD
Ovarian cancer	22174824	CNVD
Breast cancer	17899364	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Colorectal cancer	16774939	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	17133270	CNVD
Myoepithelioma	18604193	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Trisomy	24170809	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Alveolar rhabdomyosarcoma	16790082	CNVD
Prostate cancer	16573809	CNVD
Prostate cancer	18632612	CNVD
Paraganglioma	21461997	CNVD
Pheochromocytoma	21461997	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Prostate cancer	19242612	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Prostate cancer	17245344	CNVD
Colorectal cancer	21586687	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Retinoblastoma	19183342	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Developmental delay	21147756	CNVD
Melanoma	18172304	CNVD
Retinoblastoma	21504564	CNVD
Chronic lymphocytic leukemia	21795749	CNVD
Chronic lymphocytic leukemia	17805327	CNVD
Mental retardation	17502991	CNVD
Retinoblastoma	17502991	CNVD
Bipolar disorder	18458673	CNVD
Liposarcoma	21253554	CNVD
T-cell lymphomas	19863542	CNVD
Cervical cancer	21062161	CNVD
microdeletion syndrome	19284877	CNVD
Hepatocellular carcinoma	16750200	CNVD
Basal cell lymphoma	17053054	CNVD
Chronic lymphocytic leukemia	17053054	CNVD
Multiple myeloma	19135901	CNVD
Autism	18414403	CNVD
Neurocytoma	17123091	CNVD
Central neurocytomas	17123091	CNVD
Prostate cancer	16461572	CNVD
Merkel cell carcinoma	19020549	CNVD
Chronic lymphocytic leukemia	21670202	CNVD
Lung cancer	18438408	CNVD
Non-syndromic sensorineural hearing loss	18496225	CNVD
lymphocytic leukemia	21291569	CNVD
Multiple myeloma	17550852	CNVD
Glioblastoma multiforme	19435819	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Congenital anomalies of the kidney and urinary tract	20467480	CNVD
Breast cancer	21858162	CNVD
Gastrointestinal stromal cancer	20877625	CNVD
Acute myeloid leukemia	21251322	CNVD
Acute myeloid leukemia	17237825	CNVD
Chronic lymphocytic leukemia	22228453	CNVD
Myelofibrosis	22110671	CNVD
Hereditary prostate cancer	22028916	CNVD
Glioblastoma multiforme	22286061	CNVD
Chronic lymphocytic leukemia	21049055	CNVD
Prostate cancer	17217626	CNVD
Ovarian cancer	21781307	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Breast cancer	16272173	CNVD
Glioblastoma multiforme	21922591	CNVD
Metanephric adenoma	20802469	CNVD
Sezary syndrome	18413736	CNVD
Acute lymphoblastic leukemia	19100363	CNVD
Breast cancer	21990379	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Colorectal cancer	21645411	CNVD

Chromatin state (count:1421 , 50 per page) page: 1 2 3 4 5 6 7 ... 29

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:50202800-50233600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr13:50210400-50219600	Weak transcription	Primary T helper cells fromperipheralblood	blood
3	chr13:50210400-50219600	Weak transcription	Fetal Thymus	thymus
4	chr13:50210400-50219800	Weak transcription	Primary T cells from cord blood	blood
5	chr13:50210400-50224000	Weak transcription	Skeletal Muscle Female	skeletal muscle
6	chr13:50210600-50219600	Weak transcription	Dnd41	blood
7	chr13:50210600-50229800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
8	chr13:50210600-50241000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
9	chr13:50216400-50219600	Weak transcription	HUVEC	blood vessel
10	chr13:50216400-50224000	Weak transcription	Fetal Muscle Leg	muscle
11	chr13:50216800-50218400	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
12	chr13:50216800-50229800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
13	chr13:50217000-50218400	Enhancers	Primary hematopoietic stem cells short term culture	blood
14	chr13:50217000-50222800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
15	chr13:50217000-50230800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
16	chr13:50217000-50234000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
17	chr13:50217000-50236600	Weak transcription	Placenta	Placenta
18	chr13:50217000-50240000	Weak transcription	Spleen	Spleen
19	chr13:50217600-50218400	Enhancers	Primary B cells from cord blood	blood
20	chr13:50217600-50224000	Weak transcription	Lung	lung
21	chr13:50217800-50218400	Enhancers	HepG2	liver
22	chr13:50217800-50231000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
23	chr13:50217800-50241000	Weak transcription	K562	blood
24	chr13:50218000-50220400	Enhancers	Primary neutrophils fromperipheralblood	blood
25	chr13:50218000-50220800	Weak transcription	Primary B cells from peripheral blood	blood
26	chr13:50218000-50221200	Enhancers	Primary monocytes fromperipheralblood	blood
27	chr13:50218000-50225600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
28	chr13:50218400-50219200	Weak transcription	HepG2	liver
29	chr13:50218400-50219800	Weak transcription	Primary B cells from cord blood	blood
30	chr13:50218400-50219800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
31	chr13:50218400-50221200	Enhancers	Monocytes-CD14+_RO01746	blood
32	chr13:50218400-50226000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
33	chr13:50219200-50219400	Enhancers	HepG2	liver
34	chr13:50219600-50220000	Enhancers	Primary T helper naive cells fromperipheralblood	blood
35	chr13:50219600-50220000	Enhancers	Primary T killer naive cells fromperipheralblood	blood
36	chr13:50219600-50220000	Enhancers	Dnd41	blood
37	chr13:50219600-50220000	Enhancers	HUVEC	blood vessel
38	chr13:50219600-50220200	Enhancers	Primary T helper cells fromperipheralblood	blood
39	chr13:50219600-50220200	Enhancers	Fetal Thymus	thymus
40	chr13:50219600-50220400	Enhancers	Primary T cells fromperipheralblood	blood
41	chr13:50219600-50220400	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
42	chr13:50219600-50220400	Enhancers	Primary T helper naive cells from peripheral blood	blood
43	chr13:50219600-50220400	Enhancers	Primary T helper cells PMA-I stimulated	--
44	chr13:50219600-50220400	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
45	chr13:50219800-50220000	Enhancers	Primary mononuclear cells fromperipheralblood	Blood
46	chr13:50219800-50220400	Enhancers	Primary T cells from cord blood	blood
47	chr13:50219800-50220400	Enhancers	Primary T regulatory cells fromperipheralblood	blood
48	chr13:50219800-50220400	Enhancers	Primary T killer memory cells from peripheral blood	blood
49	chr13:50219800-50221000	Enhancers	Primary B cells from cord blood	blood
50	chr13:50220000-50223000	Weak transcription	HUVEC	blood vessel

The 2.0 version of rSNPBase

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