Variant report

Variant	nsv541979
Chromosome Location	chr14:21672540-21735893
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:3282)
CpG islands
(count:610)
Chromatin interactive
region (count:112)
LncRNA
region (count:7)
Mature miRNA
region (count: 0)
miRNA target
sites (count:10)

(count:3282 , 50 per page) page: 1 2 3 4 5 6 7 ... 66

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr14:21709409-21709593	HepG2	liver:	n/a	n/a
2	ARID3A	chr14:21712624-21712985	HepG2	liver:	n/a	n/a
3	ARID3A	chr14:21732200-21733006	HepG2	liver:	n/a	n/a
4	ARID3A	chr14:21697647-21697673	K562	blood:	n/a	n/a
5	ARID3A	chr14:21711256-21711587	HepG2	liver:	n/a	n/a
6	ARID3A	chr14:21711963-21711985	HepG2	liver:	n/a	n/a
7	ARID3A	chr14:21717162-21717278	K562	blood:	n/a	n/a
8	ATF2	chr14:21729052-21729484	H1-hESC	embryonic stem cell:	n/a	n/a
9	ATF2	chr14:21671705-21673219	H1-hESC	embryonic stem cell:	n/a	n/a
10	ATF2	chr14:21726892-21727596	H1-hESC	embryonic stem cell:	n/a	n/a
11	ATF2	chr14:21674092-21674706	H1-hESC	embryonic stem cell:	n/a	n/a
12	ATF2	chr14:21735848-21738400	GM12878	blood:	n/a	n/a
13	ATF2	chr14:21729447-21729836	GM12878	blood:	n/a	n/a
14	ATF2	chr14:21731544-21732278	H1-hESC	embryonic stem cell:	n/a	n/a
15	ATF2	chr14:21735629-21736731	GM12878	blood:	n/a	n/a
16	ATF2	chr14:21672214-21673111	GM12878	blood:	n/a	n/a
17	ATF2	chr14:21732138-21732971	GM12878	blood:	n/a	n/a
18	ATF2	chr14:21730290-21730933	H1-hESC	embryonic stem cell:	n/a	n/a
19	ATF2	chr14:21727624-21728013	H1-hESC	embryonic stem cell:	n/a	n/a
20	ATF2	chr14:21673281-21674952	GM12878	blood:	n/a	n/a
21	ATF2	chr14:21735362-21735856	H1-hESC	embryonic stem cell:	n/a	n/a
22	ATF2	chr14:21731973-21733035	GM12878	blood:	n/a	n/a
23	BACH1	chr14:21735698-21736021	K562	blood:	n/a	n/a
24	BATF	chr14:21732236-21732561	GM12878	blood:	n/a	chr14:21732455-21732465 chr14:21732451-21732461
25	BATF	chr14:21733926-21734221	GM12878	blood:	n/a	chr14:21734053-21734064
26	BATF	chr14:21731822-21732559	GM12878	blood:	n/a	chr14:21732455-21732465 chr14:21732451-21732461
27	BCL11A	chr14:21732207-21732610	GM12878	blood:	n/a	chr14:21732453-21732462 chr14:21732454-21732463
28	BCL3	chr14:21670476-21673261	GM12878	blood:	n/a	chr14:21672778-21672787
29	BCL3	chr14:21673287-21673627	GM12878	blood:	n/a	n/a
30	BCL3	chr14:21673671-21674743	GM12878	blood:	n/a	n/a
31	BCL3	chr14:21727073-21727426	K562	blood:	n/a	n/a
32	BCLAF1	chr14:21731491-21731826	GM12878	blood:	n/a	n/a
33	BCLAF1	chr14:21731848-21732313	K562	blood:	n/a	n/a
34	BCLAF1	chr14:21712564-21713058	GM12878	blood:	n/a	n/a
35	BCLAF1	chr14:21710768-21711305	GM12878	blood:	n/a	n/a
36	BCLAF1	chr14:21732126-21733056	GM12878	blood:	n/a	chr14:21732453-21732462 chr14:21732454-21732463
37	BCLAF1	chr14:21713989-21714387	GM12878	blood:	n/a	n/a
38	BCLAF1	chr14:21705331-21705994	GM12878	blood:	n/a	n/a
39	BCLAF1	chr14:21726995-21727466	K562	blood:	n/a	n/a
40	BCLAF1	chr14:21729129-21729488	GM12878	blood:	n/a	n/a
41	BCLAF1	chr14:21733808-21734347	GM12878	blood:	n/a	n/a
42	BCLAF1	chr14:21723447-21724382	GM12878	blood:	n/a	n/a
43	BCLAF1	chr14:21712549-21713102	GM12878	blood:	n/a	n/a
44	BCLAF1	chr14:21726752-21727540	GM12878	blood:	n/a	n/a
45	BCLAF1	chr14:21728983-21729484	K562	blood:	n/a	n/a
46	BCLAF1	chr14:21709359-21711746	GM12878	blood:	n/a	n/a
47	BCLAF1	chr14:21724730-21725441	GM12878	blood:	n/a	n/a
48	BCLAF1	chr14:21674052-21674559	GM12878	blood:	n/a	n/a
49	BCLAF1	chr14:21706763-21707518	GM12878	blood:	n/a	n/a
50	BCLAF1	chr14:21720323-21720739	GM12878	blood:	n/a	n/a

(count:610 , 50 per page) page: 1 2 3 4 5 6 7 ... 13

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr14:21679191-21679241	RPTEC	kidney:	n/a
2	chr14:21679191-21679241	BE2_C	brain:	n/a
3	chr14:21673491-21673541	Caco-2	colon:	n/a
4	chr14:21704611-21704661	BE2_C	brain:	n/a
5	chr14:21689119-21689169	SK-N-SH	brain:	n/a
6	chr14:21679191-21679241	HNPCEpiC	eye:	n/a
7	chr14:21727471-21727521	AoSMC	blood vessel:	n/a
8	chr14:21704611-21704661	AG09309	skin:	n/a
9	chr14:21676297-21676347	HEEpiC	esophagus:	n/a
10	chr14:21704611-21704661	HIPEpiC	eye:	n/a
11	chr14:21679191-21679241	NT2-D1	testis:	n/a
12	chr14:21727471-21727521	NB4	blood:	n/a
13	chr14:21704611-21704661	GM12878	blood:	n/a
14	chr14:21673491-21673541	HL-60	blood:	n/a
15	chr14:21725703-21725753	BE2_C	brain:	n/a
16	chr14:21676297-21676347	ovcar-3	ovarian:	n/a
17	chr14:21731063-21731113	H1-hESC	embryonic stem cell:	embryo
18	chr14:21725703-21725753	HPAEpiC	pulmonary alveolar:	n/a
19	chr14:21673796-21673846	HL-60	blood:	n/a
20	chr14:21673796-21673846	NH-A	brain:	n/a
21	chr14:21734410-21734460	SAEC	small airway:	n/a
22	chr14:21673796-21673846	AG09319	gingival:	n/a
23	chr14:21676297-21676347	IMR90	lung:	fetal
24	chr14:21727471-21727521	NT2-D1	testis:	n/a
25	chr14:21673491-21673541	CMK	blood:	n/a
26	chr14:21731063-21731113	BJ	skin:	n/a
27	chr14:21676297-21676347	GM12892	blood:	n/a
28	chr14:21673796-21673846	HCF	heart:	n/a
29	chr14:21689119-21689169	HEEpiC	esophagus:	n/a
30	chr14:21725703-21725753	AG10803	skin:	n/a
31	chr14:21725703-21725753	Hela-S3	cervix:	n/a
32	chr14:21673491-21673541	PANC-1	pancreas:	n/a
33	chr14:21734410-21734460	HL-60	blood:	n/a
34	chr14:21673796-21673846	PANC-1	pancreas:	n/a
35	chr14:21734410-21734460	HRE	kidney:	n/a
36	chr14:21676297-21676347	BJ	skin:	n/a
37	chr14:21689119-21689169	GM12878	blood:	n/a
38	chr14:21727471-21727521	Hepatocyte	liver:	n/a
39	chr14:21727471-21727521	T-47D	breast:	n/a
40	chr14:21673491-21673541	HRCEpiC	kidney:	n/a
41	chr14:21673796-21673846	GM12891	blood:	n/a
42	chr14:21673796-21673846	HNPCEpiC	eye:	n/a
43	chr14:21673491-21673541	Jurkat	blood:	n/a
44	chr14:21689119-21689169	IMR90	lung:	fetal
45	chr14:21727471-21727521	HCT-116	colon:	n/a
46	chr14:21673491-21673541	HCM	heart:	n/a
47	chr14:21734410-21734460	Jurkat	blood:	n/a
48	chr14:21725703-21725753	ProgFib	skin:	n/a
49	chr14:21725703-21725753	NHDF-neo	bronchial:	n/a
50	chr14:21727471-21727521	PrEC	prostate:	n/a

(count:112 , 50 per page) page: 1 2 3

No.	Distal block	Cell Line	Cell type
1	chr14:21710343..21712000-chr14:21723234..21724761,2	MCF-7	breast:
2	chr14:21698033..21699942-chr14:21736432..21738329,2	MCF-7	breast:
3	chr14:21732396..21736856-chr14:21795995..21798414,4	K562	blood:
4	chr14:21671465..21674942-chr14:21676988..21681110,7	MCF-7	breast:
5	chr14:21729320..21731037-chr14:21850307..21852347,2	K562	blood:
6	chr14:21702152..21704976-chr14:21712747..21715545,2	MCF-7	breast:
7	chr14:21682936..21686679-chr14:21688141..21690652,4	K562	blood:
8	chr14:21725773..21728367-chr14:21769503..21772392,2	MCF-7	breast:
9	chr14:21691458..21693876-chr14:21698799..21700473,3	K562	blood:
10	chr14:21705289..21706946-chr14:21709944..21711637,2	MCF-7	breast:
11	chr14:21700378..21702346-chr14:21819126..21821504,2	MCF-7	breast:
12	chr14:21701373..21707828-chr14:21708039..21714266,10	K562	blood:
13	chr14:21688131..21691193-chr14:21736092..21738684,3	MCF-7	breast:
14	chr14:21708482..21710752-chr14:21732706..21735405,2	MCF-7	breast:
15	chr14:21690598..21692490-chr14:21705492..21708066,2	MCF-7	breast:
16	chr14:21687620..21689527-chr14:21733855..21735500,2	MCF-7	breast:
17	chr14:21709759..21712361-chr14:21720311..21725270,5	K562	blood:
18	chr14:21684971..21687405-chr14:21736664..21738674,3	MCF-7	breast:
19	chr14:21680608..21683274-chr14:21683890..21685747,2	MCF-7	breast:
20	chr14:21704009..21707025-chr14:21707040..21709471,4	MCF-7	breast:
21	chr14:21713934..21716894-chr14:21726084..21727992,2	MCF-7	breast:
22	chr14:21727857..21729371-chr14:21850635..21853386,2	MCF-7	breast:
23	chr14:21728172..21729704-chr14:21921485..21922985,2	K562	blood:
24	chr14:21707926..21709527-chr14:21851833..21853917,2	MCF-7	breast:
25	chr14:21720243..21722004-chr14:21769243..21771035,2	K562	blood:
26	chr14:21682936..21686679-chr14:21688141..21690652,4	K562	blood:
27	chr14:21702039..21704805-chr14:21710008..21711834,2	MCF-7	breast:
28	chr14:21709277..21713584-chr14:21714708..21717034,3	K562	blood:
29	chr14:21703629..21706503-chr14:21849764..21851749,2	MCF-7	breast:
30	chr14:21671465..21674942-chr14:21676988..21681110,7	MCF-7	breast:
31	chr14:21687620..21689527-chr14:21733855..21735500,2	MCF-7	breast:
32	chr14:21696071..21699064-chr14:21715465..21718444,2	MCF-7	breast:
33	chr14:21709277..21713584-chr14:21714708..21717034,3	K562	blood:
34	chr14:21727224..21727734-chr6:45404153..45404890,2	NB4	blood:
35	chr14:21725390..21727095-chr14:21852518..21854130,2	K562	blood:
36	chr14:21689000..21691268-chr14:21851211..21853511,2	MCF-7	breast:
37	chr14:21701295..21703897-chr14:21842847..21844816,2	K562	blood:
38	chr14:21705854..21707392-chr14:21708475..21711254,2	K562	blood:
39	chr14:21725675..21728735-chr14:21786792..21790773,3	K562	blood:
40	chr14:21678499..21681454-chr14:21736107..21737906,2	MCF-7	breast:
41	chr14:21709578..21711363-chr14:21732079..21734857,2	MCF-7	breast:
42	chr14:21709126..21711410-chr14:21715324..21718061,2	MCF-7	breast:
43	chr14:21731127..21734828-chr14:21850549..21852828,3	K562	blood:
44	chr14:21715916..21717624-chr14:21774839..21777114,2	MCF-7	breast:
45	chr14:21729912..21732388-chr14:21794121..21797950,3	K562	blood:
46	chr14:21708563..21711469-chr14:21841010..21843260,2	K562	blood:
47	chr14:21678068..21679716-chr14:21682875..21685617,2	K562	blood:
48	chr14:21670255..21673011-chr14:21674256..21675777,2	K562	blood:
49	chr14:21725317..21729371-chr14:21774547..21778706,6	K562	blood:
50	chr14:21694684..21697867-chr14:21700846..21706348,4	MCF-7	breast:

(count:7 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-HNRNPC-1	chr14:21674770-21675059	NONHSAT035664
2	lnc-SUPT16H-3	chr14:21730762-21730857	NONHSAT035669
3	lnc-HNRNPC-1	chr14:21668238-21673662	ENSG00000258441
4	lnc-HNRNPC-1	chr14:21674770-21675059	ENSG00000258441
5	lnc-HNRNPC-1	chr14:21674770-21675059	ENSG00000251466
6	lnc-SUPT16H-3	chr14:21731152-21731988	NONHSAT035670
7	lnc-SUPT16H-3	chr14:21731470-21731988	NONHSAT035669

No data

(count:10 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location
1	HNRNPC	hsa-miR-142-3p	chr14:21678022-21678046
2	HNRNPC	hsa-let-7e-5p	chr14:21679132-21679153
3	HNRNPC	hsa-miR-335-5p	chr14:21678975-21678999
4	HNRNPC	hsa-miR-335-5p	chr14:21679069-21679091
5	HNRNPC	hsa-miR-186-5p	chr14:21679340-21679361
6	HNRNPC	hsa-miR-186-5p	chr14:21679345-21679339
7	HNRNPC	hsa-miR-142-3p	chr14:21678567-21678589
8	HNRNPC	hsa-miR-186-5p	chr14:21679046-21679067
9	HNRNPC	hsa-miR-30c-5p	chr14:21678667-21678690
10	HNRNPC	hsa-miR-30c-5p	chr14:21678673-21678667

Variant related genes	Relation type
LINC00641	TF binding region
HNRNPC	TF binding region
LINC00641	CpG island
HNRNPC	CpG island
ENSG00000165795	chromatin interactions
ENSG00000108423	chromatin interactions
ENSG00000092200	chromatin interactions
ENSG00000258441	chromatin interactions
ENSG00000092201	chromatin interactions
ENSG00000108443	chromatin interactions
ENSG00000260830	chromatin interactions
ENSG00000100888	chromatin interactions
ENSG00000034510	chromatin interactions
ENSG00000092199	chromatin interactions
STK4	miRNA target sites

Extended variants
information (count: 2874 )
Associated
traits (count: 76 )

Variant overlapped rSNPs/rCNVs (count:2874 , 50 per page) page: 1 2 3 4 5 6 7 ... 58

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs530329684	chr14:21672556-21672557	Strong transcription Weak transcription Enhancers Genic enhancers	Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
2	rs377442071	chr14:21672572-21672573	Strong transcription Weak transcription Enhancers Genic enhancers	Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
3	rs376662157	chr14:21672596-21672597	Strong transcription Weak transcription Enhancers Genic enhancers	Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
4	rs188133334	chr14:21672605-21672606	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
5	rs571158117	chr14:21672608-21672609	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
6	rs142740056	chr14:21672620-21672621	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
7	rs72673098	chr14:21672669-21672670	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
8	rs568729773	chr14:21672678-21672679	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
9	rs377100302	chr14:21672756-21672757	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
10	rs537874459	chr14:21672841-21672842	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
11	rs201604556	chr14:21672874-21672875	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
12	rs554226765	chr14:21672966-21672967	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
13	rs17102536	chr14:21672972-21672973	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
14	rs545287883	chr14:21672990-21672991	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
15	rs560169486	chr14:21673047-21673048	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
16	rs369865503	chr14:21673066-21673067	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
17	rs373539427	chr14:21673077-21673078	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
18	rs145936659	chr14:21673099-21673100	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
19	rs139790861	chr14:21673109-21673110	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
20	rs545747624	chr14:21673110-21673111	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
21	rs147669268	chr14:21673128-21673129	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
22	rs199902517	chr14:21673133-21673134	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
23	rs548902248	chr14:21673137-21673138	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
24	rs143169799	chr14:21673146-21673147	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
25	rs146687201	chr14:21673151-21673152	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
26	rs547171226	chr14:21673162-21673163	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
27	rs527836242	chr14:21673174-21673175	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
28	rs180860462	chr14:21673202-21673203	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
29	rs571022421	chr14:21673205-21673206	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
30	rs533593537	chr14:21673210-21673211	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
31	rs78120113	chr14:21673228-21673229	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
32	rs570360889	chr14:21673229-21673230	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
33	rs140213157	chr14:21673232-21673233	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
34	rs149820959	chr14:21673237-21673238	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
35	rs369632828	chr14:21673251-21673252	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
36	rs533600347	chr14:21673257-21673258	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
37	rs141354588	chr14:21673260-21673261	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
38	rs553468572	chr14:21673282-21673283	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
39	rs576936248	chr14:21673306-21673307	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
40	rs548103696	chr14:21673317-21673318	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
41	rs12892305	chr14:21673332-21673333	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region lncRNA	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
42	rs536900926	chr14:21673349-21673350	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
43	rs145830557	chr14:21673351-21673352	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
44	rs72673100	chr14:21673369-21673370	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
45	rs542242191	chr14:21673371-21673372	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
46	rs149006925	chr14:21673392-21673393	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
47	rs199895585	chr14:21673411-21673412	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
48	rs572488030	chr14:21673415-21673416	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
49	rs147125283	chr14:21673426-21673427	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
50	rs186137905	chr14:21673458-21673459	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:76)

Disease	PMID	Source
Cancer	20164920	CNVD
Esophageal cancer	21851588	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Retinoblastoma	21504564	CNVD
High-proliferative meningiomas	17937814	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Autism	22495311	CNVD
Cone-rod dystrophy	18421352	CNVD
T-cell acute lymphoblastic leukemia	20065082	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Non-small cell lung cancer	21044232	CNVD
Renal cell carcinoma	19461508	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Melanoma	18172304	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Medulloblastoma	21979893	CNVD
Oral cancer	21386901	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Hepatocellular carcinoma	22174799	CNVD
Breast cancer	17899364	CNVD
Colorectal cancer	16774939	CNVD
Neuroblastoma	19435921	CNVD
Colorectal cancer	19359472	CNVD
Gastrointestinal stromal cancer	19259404	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Paraganglioma	17535989	CNVD
Pulmonary chondroma	17535989	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Myelofibrosis	22110671	CNVD
Alzheimer''s disease	21482944	CNVD
Mental retardation	19951919	CNVD
Neuroblastoma	21899760	CNVD
Cutaneous T-cell lymphoma	21881587	CNVD
Heart disease	21282601	CNVD
Esophageal cancer	20955586	CNVD
Neurodevelopmental disorder	22521361	CNVD
Lung cancer	16773561	CNVD
Multiple myeloma	16616336	CNVD
Cancer	17440070	CNVD
Breast cancer	16272173	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Epilepsy	20736978	CNVD
Mental retardation	20736978	CNVD
severe speech impairment	20736978	CNVD
speech impairment	20736978	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
small cell lung cancer	20016488	CNVD
Developmental delay	21147756	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Lung cancer	18438408	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Renal cell carcinoma	21668985	CNVD
Prostate cancer	18632612	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Chronic myeloid leukemia	20724749	CNVD
Cancer	20164919	CNVD
Breast cancer	21364760	CNVD
Mortal	21835882	CNVD
Williams Syndrome	20824207	CNVD
Breast cancer	21858162	CNVD
Schizophrenia	20967226	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Autism	22102821	CNVD
Non-syndromic sensorineural hearing loss	19587683	CNVD
Neuroblastoma	19536264	CNVD
Schizophrenia	23813976	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Ewing''s sarcoma	18628472	CNVD
early-passage human iPS cells	21368824	CNVD

Chromatin state (count:3039 , 50 per page) page: 1 2 3 4 5 6 7 ... 61

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:21660600-21673200	Weak transcription	Psoas Muscle	Psoas
2	chr14:21660600-21686200	Weak transcription	Right Atrium	heart
3	chr14:21660800-21672800	Weak transcription	Liver	Liver
4	chr14:21660800-21675200	Weak transcription	Colon Smooth Muscle	Colon
5	chr14:21660800-21678200	Weak transcription	Right Ventricle	heart
6	chr14:21660800-21679400	Weak transcription	Gastric	stomach
7	chr14:21661000-21672800	Weak transcription	Duodenum Mucosa	Duodenum
8	chr14:21661000-21672800	Weak transcription	Spleen	Spleen
9	chr14:21661000-21673000	Weak transcription	Sigmoid Colon	Sigmoid Colon
10	chr14:21661000-21673600	Weak transcription	Rectal Mucosa Donor 31	rectum
11	chr14:21661000-21674800	Weak transcription	Primary B cells from peripheral blood	blood
12	chr14:21661000-21674800	Weak transcription	Primary T helper naive cells from peripheral blood	blood
13	chr14:21661000-21679400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
14	chr14:21661400-21672800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
15	chr14:21664000-21673000	Weak transcription	H9 Cell Line	embryonic stem cell
16	chr14:21664000-21673000	Weak transcription	HUES6 Cell Line	embryonic stem cell
17	chr14:21664000-21675000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
18	chr14:21664000-21675400	Weak transcription	H1 Cell Line	embryonic stem cell
19	chr14:21664800-21677600	Weak transcription	Placenta Amnion	Placenta Amnion
20	chr14:21665400-21677000	Weak transcription	Ovary	ovary
21	chr14:21665800-21673000	Weak transcription	Duodenum Smooth Muscle	Duodenum
22	chr14:21666000-21672800	Weak transcription	Rectal Smooth Muscle	rectum
23	chr14:21666000-21675400	Weak transcription	Brain Hippocampus Middle	brain
24	chr14:21666200-21672800	Weak transcription	Skeletal Muscle Female	skeletal muscle
25	chr14:21666400-21672600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
26	chr14:21667600-21672800	Weak transcription	Fetal Lung	lung
27	chr14:21667800-21675400	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
28	chr14:21668200-21673600	Weak transcription	HUES64 Cell Line	embryonic stem cell
29	chr14:21668600-21672800	Weak transcription	Rectal Mucosa Donor 29	rectum
30	chr14:21668800-21672600	Weak transcription	NHEK	skin
31	chr14:21669000-21674600	Weak transcription	Hela-S3	cervix
32	chr14:21669000-21679400	Weak transcription	Aorta	Aorta
33	chr14:21669000-21685800	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
34	chr14:21669200-21672600	Weak transcription	NHDF-Ad	bronchial
35	chr14:21669200-21672800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
36	chr14:21669200-21673000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
37	chr14:21669400-21673000	Weak transcription	Fetal Intestine Large	intestine
38	chr14:21669400-21679800	Weak transcription	Small Intestine	intestine
39	chr14:21669400-21681600	Strong transcription	Left Ventricle	heart
40	chr14:21669400-21685600	Strong transcription	Muscle Satellite Cultured Cells	--
41	chr14:21669800-21672800	Weak transcription	Brain Inferior Temporal Lobe	brain
42	chr14:21669800-21676400	Weak transcription	Brain Angular Gyrus	brain
43	chr14:21670000-21673000	Weak transcription	Cortex derived primary cultured neurospheres	brain
44	chr14:21670000-21679600	Strong transcription	Breast Myoepithelial Primary Cells	Breast
45	chr14:21670000-21681600	Strong transcription	Fetal Muscle Leg	muscle
46	chr14:21670200-21672800	Weak transcription	Placenta	Placenta
47	chr14:21670200-21673200	Enhancers	HepG2	liver
48	chr14:21670200-21683600	Strong transcription	Fetal Thymus	thymus
49	chr14:21670200-21684200	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
50	chr14:21670200-21684600	Strong transcription	NHLF	lung

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