Variant report

Variant	nsv542318
Chromosome Location	chr15:31601016-31628938
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr15:31618589-31618992	K562	blood:	n/a	n/a
2	ARID3A	chr15:31618550-31618737	HepG2	liver:	n/a	n/a
3	ATF1	chr15:31618502-31618980	K562	blood:	n/a	n/a
4	ATF2	chr15:31618283-31619194	GM12878	blood:	n/a	chr15:31618978-31618992
5	ATF2	chr15:31620603-31621392	GM12878	blood:	n/a	n/a
6	ATF2	chr15:31617290-31617914	GM12878	blood:	n/a	n/a
7	ATF2	chr15:31620817-31621099	GM12878	blood:	n/a	n/a
8	ATF3	chr15:31618605-31619046	K562	blood:	n/a	chr15:31618970-31618990 chr15:31618976-31618990 chr15:31618669-31618679 chr15:31618905-31618914
9	BACH1	chr15:31620467-31620575	K562	blood:	n/a	n/a
10	BACH1	chr15:31618840-31621115	H1-hESC	embryonic stem cell:	n/a	n/a
11	BACH1	chr15:31617766-31617779	H1-hESC	embryonic stem cell:	n/a	n/a
12	BACH1	chr15:31621359-31621590	H1-hESC	embryonic stem cell:	n/a	n/a
13	BATF	chr15:31620722-31621128	GM12878	blood:	n/a	n/a
14	BATF	chr15:31617301-31617614	GM12878	blood:	n/a	n/a
15	BCL11A	chr15:31617324-31617690	GM12878	blood:	n/a	n/a
16	BCL11A	chr15:31617365-31617554	GM12878	blood:	n/a	n/a
17	BCL11A	chr15:31615861-31616117	GM12878	blood:	n/a	n/a
18	BCL3	chr15:31620715-31621078	GM12878	blood:	n/a	chr15:31620878-31620891
19	BCL3	chr15:31617942-31619239	GM12878	blood:	n/a	chr15:31618938-31618947 chr15:31618149-31618162 chr15:31618933-31618946 chr15:31618360-31618373 chr15:31618099-31618112 chr15:31618424-31618433 chr15:31618661-31618670 chr15:31618494-31618507 chr15:31618416-31618429 chr15:31618932-31618945 chr15:31618212-31618225 chr15:31618935-31618948 chr15:31618612-31618625
20	BCL3	chr15:31617847-31618839	A549	lung:	n/a	chr15:31617883-31617896 chr15:31617885-31617898 chr15:31618149-31618162 chr15:31618360-31618373 chr15:31618099-31618112 chr15:31618424-31618433 chr15:31618661-31618670 chr15:31618494-31618507 chr15:31618416-31618429 chr15:31618212-31618225 chr15:31618612-31618625
21	BCLAF1	chr15:31620583-31621248	GM12878	blood:	n/a	chr15:31620878-31620891 chr15:31620593-31620602
22	BCLAF1	chr15:31616819-31619281	GM12878	blood:	n/a	chr15:31617883-31617896 chr15:31618938-31618947 chr15:31617885-31617898 chr15:31618149-31618162 chr15:31618933-31618946 chr15:31618360-31618373 chr15:31619243-31619256 chr15:31618099-31618112 chr15:31618424-31618433 chr15:31618661-31618670 chr15:31618494-31618507 chr15:31618416-31618429 chr15:31618932-31618945 chr15:31618212-31618225 chr15:31618935-31618948 chr15:31617222-31617229 chr15:31618612-31618625
23	BCLAF1	chr15:31617969-31618750	GM12878	blood:	n/a	chr15:31618149-31618162 chr15:31618360-31618373 chr15:31618099-31618112 chr15:31618424-31618433 chr15:31618661-31618670 chr15:31618494-31618507 chr15:31618416-31618429 chr15:31618212-31618225 chr15:31618612-31618625
24	BCLAF1	chr15:31616995-31617967	GM12878	blood:	n/a	chr15:31617883-31617896 chr15:31617885-31617898 chr15:31617222-31617229
25	BHLHE40	chr15:31620283-31621504	HepG2	liver:	n/a	chr15:31621042-31621051 chr15:31621041-31621054 chr15:31621037-31621058 chr15:31621044-31621053 chr15:31620807-31620823 chr15:31620315-31620331 chr15:31620821-31620837
26	BHLHE40	chr15:31618206-31619189	HepG2	liver:	n/a	chr15:31618319-31618335 chr15:31618422-31618438 chr15:31618932-31618948 chr15:31619050-31619066 chr15:31619154-31619170
27	BHLHE40	chr15:31624374-31624457	K562	blood:	n/a	n/a
28	BHLHE40	chr15:31617318-31617910	GM12878	blood:	n/a	n/a
29	BHLHE40	chr15:31619930-31622070	GM12878	blood:	n/a	chr15:31621042-31621051 chr15:31621041-31621054 chr15:31621037-31621058 chr15:31621044-31621053 chr15:31620807-31620823 chr15:31620142-31620158 chr15:31620315-31620331 chr15:31620821-31620837
30	BHLHE40	chr15:31624450-31624709	GM12878	blood:	n/a	n/a
31	BHLHE40	chr15:31618121-31619637	GM12878	blood:	n/a	chr15:31619262-31619278 chr15:31618319-31618335 chr15:31618143-31618159 chr15:31618422-31618438 chr15:31618932-31618948 chr15:31619050-31619066 chr15:31619154-31619170
32	BHLHE40	chr15:31618246-31621387	K562	blood:	n/a	chr15:31621042-31621051 chr15:31621041-31621054 chr15:31619262-31619278 chr15:31618319-31618335 chr15:31618422-31618438 chr15:31621037-31621058 chr15:31621044-31621053 chr15:31620807-31620823 chr15:31620142-31620158 chr15:31618932-31618948 chr15:31619050-31619066 chr15:31620315-31620331 chr15:31619154-31619170 chr15:31620821-31620837
33	BRCA1	chr15:31618538-31618564	HepG2	liver:	n/a	n/a
34	BRCA1	chr15:31618323-31618891	Hela-S3	cervix:	n/a	n/a
35	CCNT2	chr15:31617711-31620924	K562	blood:	n/a	chr15:31618905-31618914 chr15:31617900-31617909 chr15:31620285-31620294
36	CEBPB	chr15:31620700-31621355	GM12878	blood:	n/a	n/a
37	CEBPB	chr15:31606893-31607197	HepG2	liver:	n/a	chr15:31607057-31607068
38	CEBPB	chr15:31612763-31612962	HepG2	liver:	n/a	chr15:31612898-31612909
39	CEBPB	chr15:31618305-31619136	Hela-S3	cervix:	n/a	n/a
40	CEBPB	chr15:31606899-31607215	K562	blood:	n/a	chr15:31607057-31607068
41	CEBPB	chr15:31606926-31607175	A549	lung:	n/a	chr15:31607057-31607068
42	CEBPB	chr15:31620458-31620616	Hela-S3	cervix:	n/a	n/a
43	CEBPB	chr15:31606925-31607147	IMR90	lung:	n/a	chr15:31607057-31607068
44	CEBPD	chr15:31619984-31620619	HepG2	liver:	n/a	n/a
45	CEBPD	chr15:31618402-31619106	HepG2	liver:	n/a	n/a
46	CHD1	chr15:31618979-31620122	GM12878	blood:	n/a	chr15:31620036-31620046 chr15:31620076-31620086
47	CHD1	chr15:31616631-31618762	GM12878	blood:	n/a	n/a
48	CHD1	chr15:31617210-31621792	IMR90	lung:	n/a	chr15:31620036-31620046 chr15:31620162-31620172 chr15:31620076-31620086 chr15:31620113-31620123
49	CHD1	chr15:31620349-31621401	GM12878	blood:	n/a	n/a
50	CHD2	chr15:31619939-31620667	Hela-S3	cervix:	n/a	chr15:31620036-31620046 chr15:31620162-31620172 chr15:31620076-31620086 chr15:31620113-31620123

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr15:31622112-31622162	MCF10A-Er-Src	breast:	n/a
2	chr15:31621727-31621777	MCF-7	breast:	n/a
3	chr15:31617537-31617587	SK-N-SH_RA	brain:	n/a
4	chr15:31621629-31621679	Hepatocyte	liver:	n/a
5	chr15:31618604-31618654	IMR90	lung:	fetal
6	chr15:31622112-31622162	MCF10A-Er-Src	breast:	n/a
7	chr15:31621727-31621777	MCF-7	breast:	n/a
8	chr15:31617537-31617587	SK-N-SH_RA	brain:	n/a
9	chr15:31621629-31621679	Hepatocyte	liver:	n/a
10	chr15:31618604-31618654	IMR90	lung:	fetal
11	chr15:31617537-31617587	AG10803	skin:	n/a
12	chr15:31619006-31619056	GM12891	blood:	n/a
13	chr15:31615092-31615142	ovcar-3	ovarian:	n/a
14	chr15:31621727-31621777	NB4	blood:	n/a
15	chr15:31617764-31617814	HRCEpiC	kidney:	n/a
16	chr15:31619006-31619056	NHDF-neo	bronchial:	n/a
17	chr15:31619949-31619999	AG09319	gingival:	n/a
18	chr15:31619396-31619446	HepG2	liver:	n/a
19	chr15:31619396-31619446	SAEC	small airway:	n/a
20	chr15:31621843-31621893	PANC-1	pancreas:	n/a
21	chr15:31622112-31622162	HAEpiC	amniotic membrane:	n/a
22	chr15:31621727-31621777	PFSK-1	brain:	n/a
23	chr15:31619006-31619056	LNCaP	prostate:	n/a
24	chr15:31620290-31620340	HRE	kidney:	n/a
25	chr15:31621629-31621679	GM19239	blood:	n/a
26	chr15:31619006-31619056	HEEpiC	esophagus:	n/a
27	chr15:31619006-31619056	PrEC	prostate:	n/a
28	chr15:31625860-31625910	HCF	heart:	n/a
29	chr15:31622112-31622162	HRE	kidney:	n/a
30	chr15:31625860-31625910	PANC-1	pancreas:	n/a
31	chr15:31618604-31618654	GM12892	blood:	n/a
32	chr15:31624584-31624634	RPTEC	kidney:	n/a
33	chr15:31619949-31619999	AG09309	skin:	n/a
34	chr15:31620290-31620340	MCF10A-Er-Src	breast:	n/a
35	chr15:31621843-31621893	HCPEpiC	choroid plexus:	n/a
36	chr15:31624584-31624634	HCM	heart:	n/a
37	chr15:31619006-31619056	CMK	blood:	n/a
38	chr15:31619399-31619449	SAEC	small airway:	n/a
39	chr15:31617764-31617814	Hepatocyte	liver:	n/a
40	chr15:31615092-31615142	PANC-1	pancreas:	n/a
41	chr15:31624584-31624634	A549	lung:	n/a
42	chr15:31625860-31625910	NH-A	brain:	n/a
43	chr15:31619396-31619446	HRCEpiC	kidney:	n/a
44	chr15:31617633-31617683	NT2-D1	testis:	n/a
45	chr15:31622112-31622162	LNCaP	prostate:	n/a
46	chr15:31619006-31619056	SK-N-SH	brain:	n/a
47	chr15:31619396-31619446	Hela-S3	cervix:	n/a
48	chr15:31611603-31611653	HepG2	liver:	n/a
49	chr15:31621629-31621679	AG09319	gingival:	n/a
50	chr15:31621796-31621846	HCM	heart:	n/a

No.	Distal block	Cell Line	Cell type
1	chr15:31618838..31621702-chr15:31631313..31632972,2	MCF-7	breast:
2	chr15:31608249..31610861-chr15:31620873..31623099,2	K562	blood:
3	chr15:31624025..31626042-chr15:31627100..31628878,2	MCF-7	breast:
4	chr15:31507333..31508207-chr15:31618137..31618644,2	MCF-7	breast:
5	chr15:31618754..31620549-chr15:31631588..31633647,2	K562	blood:
6	chr15:31623211..31625862-chr15:31627016..31631402,5	K562	blood:
7	chr15:31619684..31620471-chr16:30709793..30710319,2	Hela-S3	cervix:
8	chr15:31595555..31597480-chr15:31602302..31603930,2	MCF-7	breast:
9	chr15:31604052..31606303-chr15:31617719..31620636,2	MCF-7	breast:
10	chr15:31616992..31619470-chr15:31682984..31685911,2	K562	blood:
11	chr15:31627136..31629946-chr15:31655058..31657615,2	K562	blood:
12	chr15:31618168..31621382-chr15:31631982..31634646,4	MCF-7	breast:
13	chr15:31623034..31624818-chr15:31626404..31628537,2	MCF-7	breast:
14	chr15:31613330..31614958-chr15:31617530..31619588,2	MCF-7	breast:
15	chr15:31623211..31625862-chr15:31627016..31631402,5	K562	blood:
16	chr15:31618837..31619492-chr17:8286314..8286908,2	Hela-S3	cervix:
17	chr15:31623034..31624818-chr15:31626404..31628537,2	MCF-7	breast:
18	chr15:31608249..31610861-chr15:31620873..31623099,2	K562	blood:
19	chr15:31627397..31629658-chr15:31630745..31632806,2	K562	blood:
20	chr15:31612703..31615766-chr15:31616298..31621086,4	K562	blood:
21	chr15:31618267..31621353-chr15:31621763..31625829,5	MCF-7	breast:
22	chr15:31618253..31621608-chr15:31655043..31658553,3	K562	blood:
23	chr15:31619962..31620883-chr7:26239738..26240418,2	Hela-S3	cervix:
24	chr15:31618668..31619569-chr2:9770552..9771168,2	HCT-116	colon:
25	chr15:31600316..31602672-chr15:31614441..31616388,2	K562	blood:
26	chr15:31620067..31620789-chr15:31727225..31727966,3	MCF-7	breast:
27	chr15:31600316..31602672-chr15:31614441..31616388,2	K562	blood:
28	chr15:31618609..31619470-chr7:143077778..143078496,2	Hela-S3	cervix:
29	chr15:31597476..31599071-chr15:31602253..31605073,2	K562	blood:
30	chr15:31592714..31596945-chr15:31609581..31612731,3	MCF-7	breast:
31	chr15:31616920..31619586-chr8:103667733..103670691,2	MCF-7	breast:
32	chr15:31608249..31610861-chr15:31620080..31623099,3	K562	blood:
33	chr15:31617830..31618662-chr8:43094478..43095043,2	MCF-7	breast:
34	chr15:31615051..31617348-chr15:31618558..31620295,2	MCF-7	breast:
35	chr15:31619043..31619728-chr17:62340009..62340776,2	Hela-S3	cervix:
36	chr15:31507074..31509248-chr15:31619187..31621529,2	MCF-7	breast:
37	chr15:31624025..31626042-chr15:31627100..31628878,2	MCF-7	breast:
38	chr15:31618149..31620497-chr15:31657004..31658970,2	MCF-7	breast:
39	chr15:31615054..31617899-chr15:31634755..31636481,2	MCF-7	breast:
40	chr15:31608249..31610861-chr15:31620080..31623099,3	K562	blood:
41	chr15:31618617..31619175-chr17:76920900..76921481,2	Hela-S3	cervix:
42	chr15:31617749..31621012-chr15:31623649..31627723,5	MCF-7	breast:
43	chr15:31618649..31619470-chr7:86781497..86782119,2	Hela-S3	cervix:
44	chr15:31507690..31508326-chr15:31619594..31620115,2	MCF-7	breast:
45	chr15:31619156..31619701-chr5:40678819..40679598,2	Hela-S3	cervix:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-FAN1-2	chr15:31619770-31619992	NONHSAT041444

Variant related genes	Relation type
KLF13	TF binding region
KLF13	CpG island
ENSG00000161970	chromatin interactions
ENSG00000135164	chromatin interactions
ENSG00000122566	chromatin interactions
ENSG00000261840	chromatin interactions
ENSG00000224046	chromatin interactions
ENSG00000134308	chromatin interactions
ENSG00000155090	chromatin interactions
ENSG00000136478	chromatin interactions
ENSG00000263809	chromatin interactions
ENSG00000035862	chromatin interactions
ENSG00000159840	chromatin interactions
ENSG00000259448	chromatin interactions
ENSG00000169926	chromatin interactions

Extended variants
information (count: 1163 )
Associated
traits (count: 92 )

Variant overlapped rSNPs/rCNVs (count:1163 , 50 per page) page: 1 2 3 4 5 6 7 ... 24

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs536817299	chr15:31601028-31601029	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
2	rs117200252	chr15:31601073-31601074	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
3	rs143083042	chr15:31601102-31601103	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
4	rs72718931	chr15:31601114-31601115	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
5	rs79921437	chr15:31601130-31601131	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
6	rs537882382	chr15:31601147-31601148	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
7	rs146376323	chr15:31601148-31601149	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
8	rs7163688	chr15:31601174-31601175	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
9	rs573421690	chr15:31601291-31601292	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
10	rs188817778	chr15:31601323-31601324	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
11	rs370635211	chr15:31601324-31601325	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
12	rs139576853	chr15:31601334-31601335	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
13	rs575522644	chr15:31601335-31601336	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
14	rs12324520	chr15:31601370-31601371	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
15	rs142854414	chr15:31601407-31601408	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
16	rs556194114	chr15:31601420-31601421	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
17	rs533034522	chr15:31601513-31601514	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
18	rs12324600	chr15:31601523-31601524	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
19	rs559700082	chr15:31601555-31601556	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
20	rs12324628	chr15:31601563-31601564	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
21	rs35820402	chr15:31601603-31601604	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
22	rs548685891	chr15:31601611-31601612	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
23	rs568585381	chr15:31601636-31601637	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
24	rs144217927	chr15:31601647-31601648	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
25	rs550854897	chr15:31601703-31601704	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
26	rs571164876	chr15:31601709-31601710	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
27	rs148720928	chr15:31601733-31601734	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
28	rs73381256	chr15:31601769-31601770	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
29	rs372357487	chr15:31601827-31601828	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
30	rs566854948	chr15:31601835-31601836	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
31	rs538365857	chr15:31601852-31601853	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
32	rs190161923	chr15:31601884-31601885	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
33	rs553796607	chr15:31601944-31601945	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
34	rs182753345	chr15:31601957-31601958	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
35	rs575600370	chr15:31601975-31601976	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
36	rs544403282	chr15:31601980-31601981	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
37	rs186664146	chr15:31601994-31601995	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
38	rs557667919	chr15:31602029-31602030	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs191469186	chr15:31602030-31602031	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs368427278	chr15:31602046-31602047	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs142289920	chr15:31602053-31602054	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs559983671	chr15:31602078-31602079	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs2338701	chr15:31602087-31602088	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
44	rs185509195	chr15:31602099-31602100	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs140654448	chr15:31602154-31602155	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs113239791	chr15:31602173-31602174	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs547977328	chr15:31602197-31602198	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs531297534	chr15:31602202-31602203	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs115013857	chr15:31602212-31602213	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs188768556	chr15:31602256-31602257	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:92)

Disease	PMID	Source
HDAC8	0	CNVD
NIPBL	0	CNVD
RAD21	0	CNVD
SMC1A	0	CNVD
SMC3	0	CNVD
Ewing''s sarcoma	21437220	CNVD
Schizophrenia	19415332	CNVD
Breast cancer	22522925	CNVD
Autism	22495311	CNVD
Wilms tumour	21544195	CNVD
Angelman syndrome	16183798	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Testicular germ cell tumor	18059402	CNVD
cataract	16735990	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Medulloblastoma	21979893	CNVD
spastic paraplegia with thinning of corpus callosum	19105190	CNVD
Schizophrenia	21324950	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Disease	21824424	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Melanoma	18172304	CNVD
Autism	17322880	CNVD
Prader-willi syndrome	19329560	CNVD
Autism	17999366	CNVD
Autism	17901113	CNVD
Neurodevelopmental disorder	17015230	CNVD
Autism	18414403	CNVD
Neurocytoma	17123091	CNVD
Mental retardation	18923513	CNVD
Colorectal cancer	16774939	CNVD
Gastric cancer	17167181	CNVD
Neuroblastoma	19435921	CNVD
Colorectal cancer	19359472	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Colorectal cancer	16272173	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Multiple myeloma	17550852	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Intellectual disability	22102821	CNVD
Hodgkin''s lymphoma	17606441	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Breast cancer	21509527	CNVD
Acute myeloid leukemia	20729466	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Breast cancer	17133270	CNVD
Prostate cancer	16573809	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Multiple myeloma	20724749	CNVD
Lung cancer	18438408	CNVD
Breast cancer	21858162	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	21785460	CNVD
Prostate cancer	18632612	CNVD
Abnormal corpus callosum	21572526	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Autism	19204725	CNVD
Schizophrenia	19204725	CNVD
Schizophrenia	19149910	CNVD
Ovarian cancer	22174824	CNVD
Epilepsy	20502679	CNVD
small cell lung cancer	20016488	CNVD
Autism	19521722	CNVD
Bipolar disorder	19114987	CNVD
Epilepsy	19521722	CNVD
Mental retardation	19521722	CNVD
Schizophrenia	19521646	CNVD
Autism	19050728	CNVD
Schizophrenia	19348701	CNVD
Schizophrenia	18668039	CNVD
Schizophrenia	18990708	CNVD
Schizophrenia	19571808	CNVD
Velocardiofacial syndrome	19329560	CNVD
Schizophrenia	19443537	CNVD
Epilepsy	20923578	CNVD
Autism	19955444	CNVD
Autism	20964600	CNVD
Schizophrenia	19955444	CNVD
Olfactory neuroblastoma	18408657	CNVD
Pancreatic cancer	17952125	CNVD
Legius syndrome	19443465	CNVD
Holoprosencephaly	21359414	CNVD
Myelofibrosis	22110671	CNVD
Glioblastoma multiforme	22286061	CNVD
Renal cell carcinoma	21215367	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:1319 , 50 per page) page: 1 2 3 4 5 6 7 ... 27

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:31589400-31601800	Enhancers	Fetal Muscle Leg	muscle
2	chr15:31591800-31601400	Enhancers	Fetal Brain Male	brain
3	chr15:31592400-31601600	Enhancers	Spleen	Spleen
4	chr15:31592400-31602800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
5	chr15:31592800-31601800	Enhancers	Cortex derived primary cultured neurospheres	brain
6	chr15:31593000-31601200	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
7	chr15:31593200-31602800	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
8	chr15:31594200-31602800	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
9	chr15:31594600-31603000	Enhancers	H1 Cell Line	embryonic stem cell
10	chr15:31595000-31601400	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
11	chr15:31597000-31601800	Enhancers	HUES48 Cell Line	embryonic stem cell
12	chr15:31597200-31601400	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
13	chr15:31598400-31601600	Bivalent Enhancer	Fetal Muscle Trunk	muscle
14	chr15:31598800-31601400	Enhancers	GM12878-XiMat	blood
15	chr15:31598800-31601600	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
16	chr15:31598800-31601600	Enhancers	Primary B cells from peripheral blood	blood
17	chr15:31598800-31601600	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
18	chr15:31599000-31601200	Enhancers	Primary T helper cells PMA-I stimulated	--
19	chr15:31599000-31601600	Flanking Active TSS	Fetal Thymus	thymus
20	chr15:31599000-31603000	Enhancers	Primary T cells from cord blood	blood
21	chr15:31599200-31601800	Enhancers	Primary B cells from cord blood	blood
22	chr15:31599200-31602000	Bivalent Enhancer	Primary T cells fromperipheralblood	blood
23	chr15:31599400-31601600	Enhancers	iPS-20b Cell Line	embryonic stem cell
24	chr15:31599400-31602800	Enhancers	Primary T helper naive cells fromperipheralblood	blood
25	chr15:31599600-31601400	Enhancers	Duodenum Mucosa	Duodenum
26	chr15:31599600-31601600	Enhancers	iPS-18 Cell Line	embryonic stem cell
27	chr15:31599600-31602000	Enhancers	Primary T killer naive cells fromperipheralblood	blood
28	chr15:31599800-31601600	Enhancers	Primary hematopoietic stem cells short term culture	blood
29	chr15:31599800-31601800	Enhancers	Dnd41	blood
30	chr15:31599800-31604400	Weak transcription	Brain Angular Gyrus	brain
31	chr15:31600000-31601200	Enhancers	HUES64 Cell Line	embryonic stem cell
32	chr15:31600000-31601600	Enhancers	Primary T helper naive cells from peripheral blood	blood
33	chr15:31600000-31601800	Enhancers	Brain Germinal Matrix	brain
34	chr15:31600200-31601200	Enhancers	Primary T killer memory cells from peripheral blood	blood
35	chr15:31600200-31601400	Enhancers	ES-I3 Cell Line	embryonic stem cell
36	chr15:31600200-31602000	Enhancers	Primary T helper cells fromperipheralblood	blood
37	chr15:31600400-31602000	Enhancers	HUES6 Cell Line	embryonic stem cell
38	chr15:31600600-31602600	Enhancers	iPS-15b Cell Line	embryonic stem cell
39	chr15:31600800-31601800	Flanking Active TSS	Thymus	Thymus
40	chr15:31600800-31608400	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
41	chr15:31601200-31602400	Weak transcription	HUES64 Cell Line	embryonic stem cell
42	chr15:31601200-31605600	Weak transcription	Primary T helper cells PMA-I stimulated	--
43	chr15:31601200-31605600	Weak transcription	Primary T killer memory cells from peripheral blood	blood
44	chr15:31601400-31602600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
45	chr15:31601400-31606400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
46	chr15:31601600-31601800	Bivalent Enhancer	Foreskin Melanocyte Primary Cells skin01	Skin
47	chr15:31601600-31602200	Weak transcription	Primary T helper naive cells from peripheral blood	blood
48	chr15:31601600-31602600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
49	chr15:31601600-31604000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
50	chr15:31601600-31605200	Enhancers	Fetal Thymus	thymus

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