Variant report

Variant	nsv542949
Chromosome Location	chr16:72375524-72509686
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:962)
CpG islands
(count:610)
Chromatin interactive
region (count:42)
LncRNA
region (count:24)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:962 , 50 per page) page: 1 2 3 4 5 6 7 ... 20

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr16:72443237-72443615	HepG2	liver:	n/a	n/a
2	ARID3A	chr16:72502532-72502843	HepG2	liver:	n/a	n/a
3	ARID3A	chr16:72489949-72490982	HepG2	liver:	n/a	n/a
4	ARID3A	chr16:72449206-72449825	HepG2	liver:	n/a	n/a
5	ARID3A	chr16:72434190-72434491	HepG2	liver:	n/a	n/a
6	ARID3A	chr16:72476024-72476754	HepG2	liver:	n/a	n/a
7	ARID3A	chr16:72503693-72504255	HepG2	liver:	n/a	n/a
8	ARID3A	chr16:72396487-72396686	HepG2	liver:	n/a	n/a
9	ATF1	chr16:72451679-72451725	K562	blood:	n/a	n/a
10	ATF2	chr16:72405175-72405474	H1-hESC	embryonic stem cell:	n/a	n/a
11	BACH1	chr16:72405244-72405582	H1-hESC	embryonic stem cell:	n/a	n/a
12	BHLHE40	chr16:72476323-72476654	HepG2	liver:	n/a	n/a
13	BHLHE40	chr16:72449435-72449541	HepG2	liver:	n/a	n/a
14	BRCA1	chr16:72501138-72501387	H1-hESC	embryonic stem cell:	n/a	n/a
15	CBX3	chr16:72468054-72468449	HCT-116	colon:	n/a	n/a
16	CBX3	chr16:72508250-72508877	HCT-116	colon:	n/a	n/a
17	CBX3	chr16:72468096-72468386	K562	blood:	n/a	n/a
18	CBX3	chr16:72468148-72468413	HCT-116	colon:	n/a	n/a
19	CBX3	chr16:72468064-72468385	K562	blood:	n/a	n/a
20	CBX3	chr16:72508334-72508886	HCT-116	colon:	n/a	n/a
21	CEBPB	chr16:72434025-72434511	MCF-7	breast:	n/a	chr16:72434279-72434290
22	CEBPB	chr16:72434102-72434475	K562	blood:	n/a	chr16:72434279-72434290
23	CEBPB	chr16:72434219-72434411	HepG2	liver:	n/a	chr16:72434279-72434290
24	CEBPB	chr16:72471816-72472171	IMR90	lung:	n/a	chr16:72471980-72471993 chr16:72471980-72471991 chr16:72471982-72471991 chr16:72471982-72471991 chr16:72471980-72471993 chr16:72471981-72471992 chr16:72471982-72471991 chr16:72472138-72472155 chr16:72471980-72471993 chr16:72471982-72471991
25	CEBPB	chr16:72434115-72434520	H1-hESC	embryonic stem cell:	n/a	chr16:72434279-72434290
26	CEBPB	chr16:72434161-72434463	A549	lung:	n/a	chr16:72434279-72434290
27	CEBPB	chr16:72434114-72434492	A549	lung:	n/a	chr16:72434279-72434290
28	CEBPB	chr16:72448638-72448790	HepG2	liver:	n/a	chr16:72448752-72448763
29	CEBPB	chr16:72471884-72472154	H1-hESC	embryonic stem cell:	n/a	chr16:72471980-72471993 chr16:72471980-72471991 chr16:72471982-72471991 chr16:72471982-72471991 chr16:72471980-72471993 chr16:72471981-72471992 chr16:72471982-72471991 chr16:72471980-72471993 chr16:72471982-72471991
30	CEBPB	chr16:72405791-72406010	HepG2	liver:	n/a	n/a
31	CEBPB	chr16:72471823-72472158	HepG2	liver:	n/a	chr16:72471980-72471993 chr16:72471980-72471991 chr16:72471982-72471991 chr16:72471982-72471991 chr16:72471980-72471993 chr16:72471981-72471992 chr16:72471982-72471991 chr16:72472138-72472155 chr16:72471980-72471993 chr16:72471982-72471991
32	CEBPB	chr16:72445756-72445843	IMR90	lung:	n/a	n/a
33	CEBPB	chr16:72405040-72405462	ECC-1	luminal epithelium:	n/a	chr16:72405117-72405129
34	CEBPB	chr16:72507959-72508207	HepG2	liver:	n/a	n/a
35	CEBPB	chr16:72449118-72449417	HepG2	liver:	n/a	n/a
36	CEBPB	chr16:72434109-72434474	IMR90	lung:	n/a	chr16:72434279-72434290
37	CEBPB	chr16:72431982-72432027	HepG2	liver:	n/a	n/a
38	CEBPB	chr16:72405765-72405988	IMR90	lung:	n/a	n/a
39	CEBPB	chr16:72476405-72476605	HepG2	liver:	n/a	n/a
40	CEBPB	chr16:72434145-72434492	A549	lung:	n/a	chr16:72434279-72434290
41	CEBPB	chr16:72463921-72464435	Hela-S3	cervix:	n/a	n/a
42	CEBPB	chr16:72476361-72476726	HepG2	liver:	n/a	n/a
43	CEBPB	chr16:72471834-72472133	A549	lung:	n/a	chr16:72471980-72471993 chr16:72471980-72471991 chr16:72471982-72471991 chr16:72471982-72471991 chr16:72471980-72471993 chr16:72471981-72471992 chr16:72471982-72471991 chr16:72471980-72471993 chr16:72471982-72471991
44	CEBPB	chr16:72434120-72434393	K562	blood:	n/a	chr16:72434279-72434290
45	CEBPB	chr16:72494444-72494546	A549	lung:	n/a	n/a
46	CEBPB	chr16:72498233-72498396	HepG2	liver:	n/a	n/a
47	CEBPB	chr16:72467620-72467937	IMR90	lung:	n/a	chr16:72467757-72467768
48	CEBPB	chr16:72471846-72472136	Hela-S3	cervix:	n/a	chr16:72471980-72471993 chr16:72471980-72471991 chr16:72471982-72471991 chr16:72471982-72471991 chr16:72471980-72471993 chr16:72471981-72471992 chr16:72471982-72471991 chr16:72471980-72471993 chr16:72471982-72471991
49	CEBPB	chr16:72405856-72405935	H1-hESC	embryonic stem cell:	n/a	n/a
50	CEBPB	chr16:72501120-72501398	H1-hESC	embryonic stem cell:	n/a	n/a

(count:610 , 50 per page) page: 1 2 3 4 5 6 7 ... 13

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr16:72459516-72459566	HEK293	kidney:	embryo
2	chr16:72459978-72460028	ECC-1	luminal epithelium:	n/a
3	chr16:72459796-72459846	HEK293	kidney:	embryo
4	chr16:72405329-72405379	HRPEpiC	eye:	n/a
5	chr16:72459978-72460028	HCPEpiC	choroid plexus:	n/a
6	chr16:72459796-72459846	SK-N-SH	brain:	n/a
7	chr16:72459595-72459645	SK-N-MC	brain:	n/a
8	chr16:72444626-72444676	HAEpiC	amniotic membrane:	n/a
9	chr16:72460114-72460164	AG04450	lung:	fetal
10	chr16:72459516-72459566	NB4	blood:	n/a
11	chr16:72444626-72444676	SKMC	muscle:	n/a
12	chr16:72460114-72460164	CMK	blood:	n/a
13	chr16:72459516-72459566	PFSK-1	brain:	n/a
14	chr16:72459978-72460028	SKMC	muscle:	n/a
15	chr16:72459825-72459875	NT2-D1	testis:	n/a
16	chr16:72459595-72459645	HNPCEpiC	eye:	n/a
17	chr16:72460114-72460164	HEK293	kidney:	embryo
18	chr16:72392048-72392098	HL-60	blood:	n/a
19	chr16:72460083-72460133	MCF10A-Er-Src	breast:	n/a
20	chr16:72460114-72460164	HUVEC	blood vessel:	n/a
21	chr16:72459825-72459875	HPAEpiC	pulmonary alveolar:	n/a
22	chr16:72405329-72405379	SKMC	muscle:	n/a
23	chr16:72459796-72459846	Caco-2	colon:	n/a
24	chr16:72459516-72459566	HIPEpiC	eye:	n/a
25	chr16:72444626-72444676	HRCEpiC	kidney:	n/a
26	chr16:72444626-72444676	HCM	heart:	n/a
27	chr16:72459978-72460028	NHBE	bronchial:	n/a
28	chr16:72459595-72459645	Hela-S3	cervix:	n/a
29	chr16:72459978-72460028	K562	blood:	n/a
30	chr16:72459595-72459645	Jurkat	blood:	n/a
31	chr16:72459516-72459566	HMEC	breast:	n/a
32	chr16:72459978-72460028	GM19239	blood:	n/a
33	chr16:72444626-72444676	BE2_C	brain:	n/a
34	chr16:72459516-72459566	HCPEpiC	choroid plexus:	n/a
35	chr16:72459978-72460028	HCM	heart:	n/a
36	chr16:72460114-72460164	SAEC	small airway:	n/a
37	chr16:72459595-72459645	GM12878	blood:	n/a
38	chr16:72444626-72444676	PrEC	prostate:	n/a
39	chr16:72459825-72459875	GM12891	blood:	n/a
40	chr16:72459796-72459846	AG04449	skin:	fetal
41	chr16:72405329-72405379	AG10803	skin:	n/a
42	chr16:72444626-72444676	HL-60	blood:	n/a
43	chr16:72459825-72459875	HNPCEpiC	eye:	n/a
44	chr16:72459796-72459846	MCF-7	breast:	n/a
45	chr16:72460083-72460133	HPAEpiC	pulmonary alveolar:	n/a
46	chr16:72459978-72460028	PANC-1	pancreas:	n/a
47	chr16:72459516-72459566	HepG2	liver:	n/a
48	chr16:72405329-72405379	AG04450	lung:	fetal
49	chr16:72459595-72459645	GM12891	blood:	n/a
50	chr16:72459825-72459875	HUVEC	blood vessel:	n/a

(count:42 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr16:72391765..72393568-chr16:72393614..72396584,2	K562	blood:
2	chr16:72437157..72440577-chr16:72442947..72444634,3	MCF-7	breast:
3	chr16:72504730..72507157-chr16:72516819..72518970,2	MCF-7	breast:
4	chr16:72412222..72413833-chr16:72418012..72420892,2	K562	blood:
5	chr16:72433906..72434918-chr16:72500757..72501753,4	MCF-7	breast:
6	chr16:72495627..72498619-chr16:72502820..72505765,2	K562	blood:
7	chr16:72472061..72473640-chr16:72477972..72479514,2	MCF-7	breast:
8	chr16:72425503..72427472-chr16:72432559..72435095,2	MCF-7	breast:
9	chr16:72158517..72159442-chr16:72500757..72501710,3	MCF-7	breast:
10	chr16:72495627..72498619-chr16:72502820..72505765,2	K562	blood:
11	chr16:72392062..72394300-chr16:72394460..72396793,2	MCF-7	breast:
12	chr16:72391483..72394140-chr16:72422108..72424011,2	K562	blood:
13	chr16:72275519..72276391-chr16:72500758..72501752,2	K562	blood:
14	chr16:72412333..72415152-chr16:72418012..72419519,2	K562	blood:
15	chr16:72444090..72445651-chr16:72450637..72452922,2	K562	blood:
16	chr16:72425503..72427472-chr16:72432559..72435095,2	MCF-7	breast:
17	chr16:72444079..72445651-chr16:72450697..72452922,2	K562	blood:
18	chr16:72391765..72393568-chr16:72393614..72396584,2	K562	blood:
19	chr16:72503607..72506590-chr16:72509410..72511219,2	K562	blood:
20	chr16:72391483..72394140-chr16:72422108..72424011,2	K562	blood:
21	chr16:72275348..72276522-chr16:72500758..72501765,11	MCF-7	breast:
22	chr16:72508162..72510433-chr16:72510794..72512669,2	MCF-7	breast:
23	chr16:72275512..72276382-chr16:72500748..72501728,5	MCF-7	breast:
24	chr16:72503607..72506590-chr16:72509410..72511219,2	K562	blood:
25	chr16:72453071..72454725-chr16:72457023..72458717,2	MCF-7	breast:
26	chr16:72412222..72413833-chr16:72418012..72420892,2	K562	blood:
27	chr16:72392317..72394790-chr16:72403681..72405452,2	K562	blood:
28	chr16:72412333..72415152-chr16:72418012..72419519,2	K562	blood:
29	chr16:72453071..72454725-chr16:72457023..72458717,2	MCF-7	breast:
30	chr16:72392062..72394300-chr16:72394460..72396793,2	MCF-7	breast:
31	chr16:72472061..72473640-chr16:72477972..72479514,2	MCF-7	breast:
32	chr16:72490089..72492930-chr16:72500761..72502582,2	MCF-7	breast:
33	chr16:72500752..72501495-chr20:52194750..52195674,2	MCF-7	breast:
34	chr16:72392317..72394790-chr16:72403681..72405452,2	K562	blood:
35	chr16:72433824..72434833-chr16:72500385..72501774,13	MCF-7	breast:
36	chr16:72433906..72434918-chr16:72500757..72501753,4	MCF-7	breast:
37	chr16:72444079..72445651-chr16:72450697..72452922,2	K562	blood:
38	chr16:72437157..72440577-chr16:72442947..72444634,3	MCF-7	breast:
39	chr16:72468334..72468996-chr4:153881337..153881856,2	MCF-7	breast:
40	chr16:72433824..72434833-chr16:72500385..72501774,13	MCF-7	breast:
41	chr16:72444090..72445651-chr16:72450637..72452922,2	K562	blood:
42	chr16:72490089..72492930-chr16:72500761..72502582,2	MCF-7	breast:

(count:24 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-PMFBP1-4	chr16:72495528-72496192	NONHSAT143568
2	lnc-DHX38-11	chr16:72501082-72501436	NONHSAT143573
3	lnc-DHX38-3	chr16:72463252-72463962	XLOC_011780
4	lnc-PMFBP1-4	chr16:72459384-72461356	ENSG00000261008.2
5	lnc-PMFBP1-6	chr16:72499010-72499251	NONHSAT143572
6	lnc-PMFBP1-3	chr16:72391523-72392089	NONHSAT143557
7	lnc-DHX38-2	chr16:72459847-72463072	ENSG00000260664.1
8	lnc-DHX38-3	chr16:72463032-72464069	NONHSAT143569
9	lnc-DHX38-13	chr16:72509533-72509983	NONHSAT143575
10	lnc-PMFBP1-4	chr16:72460772-72461356	NONHSAT143568
11	lnc-DHX38-9	chr16:72447198-72449553	NONHSAT143564
12	lnc-PMFBP1-4	chr16:72461289-72463966	XLOC_012004
13	lnc-DHX38-8	chr16:72443091-72443170	NONHSAT143563
14	lnc-PMFBP1-4	chr16:72505078-72505453	NONHSAT143568
15	lnc-DHX38-8	chr16:72431613-72432355	NONHSAT143563
16	lnc-PMFBP1-4	chr16:72461289-72461323	XLOC_012004
17	lnc-DHX38-10	chr16:72498597-72498903	NONHSAT143571
18	lnc-DHX38-8	chr16:72431613-72432355	FPKM1_group_11846_transcript_8
19	lnc-DHX38-12	chr16:72505482-72505995	NONHSAT143574
20	lnc-DHX38-8	chr16:72443091-72443098	FPKM1_group_11846_transcript_8
21	lnc-PMFBP1-4	chr16:72459901-72460166	XLOC_012004
22	lnc-PMFBP1-3	chr16:72380224-72380971	NONHSAT143557
23	lnc-PMFBP1-4	chr16:72425087-72425114	XLOC_012004
24	lnc-PMFBP1-3	chr16:72391412-72391517	NONHSAT143557

No data

Variant related genes	Relation type
ENSG00000260664	TF binding region
RNU6-385P	TF binding region
ENSG00000260664	CpG island
RNU6-385P	CpG island
ENSG00000118557	chromatin interactions
SUV420H1	miRNA target sites
ZCCHC14	miRNA target sites
AKAP12	miRNA target sites
RC3H2	miRNA target sites
NIPBL	miRNA target sites

Extended variants
information (count: 4358 )
Associated
traits (count: 68 )

Variant overlapped rSNPs/rCNVs (count:4358 , 50 per page) page: 1 2 3 4 5 6 7 ... 88

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs575615180	chr16:72375527-72375528	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs199864259	chr16:72375539-72375540	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs376881167	chr16:72375556-72375557	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs146769487	chr16:72375603-72375604	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs190619017	chr16:72375632-72375633	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs181862685	chr16:72375668-72375669	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs185148745	chr16:72375681-72375682	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs577197518	chr16:72375689-72375690	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs188764302	chr16:72375752-72375753	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs369616225	chr16:72375759-72375760	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs148898357	chr16:72375838-72375839	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs531759339	chr16:72375863-72375864	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs550164941	chr16:72375867-72375868	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs568778798	chr16:72375892-72375893	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs529562168	chr16:72375893-72375894	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs547945426	chr16:72375917-72375918	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs547718847	chr16:72375936-72375937	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs566252062	chr16:72375948-72375949	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs200990630	chr16:72375949-72375950	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs557815068	chr16:72375960-72375961	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs569386582	chr16:72375978-72375979	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs536666945	chr16:72375982-72375983	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs554904989	chr16:72375988-72375989	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs573601683	chr16:72376024-72376025	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs113735562	chr16:72376032-72376033	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs541316342	chr16:72376091-72376092	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs552933725	chr16:72376113-72376114	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs577753428	chr16:72376116-72376117	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs544847124	chr16:72376133-72376134	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs564586329	chr16:72376150-72376151	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs531798997	chr16:72376175-72376176	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs543841329	chr16:72376306-72376307	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs62053978	chr16:72376370-72376371	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs539312499	chr16:72376528-72376529	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs181088922	chr16:72376662-72376663	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs201903392	chr16:72376915-72376916	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs200071515	chr16:72376918-72376919	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs373615267	chr16:72376946-72376947	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs200823430	chr16:72376953-72376954	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs201646912	chr16:72376986-72376987	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs200130610	chr16:72377127-72377128	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs201828540	chr16:72377191-72377192	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs199963406	chr16:72377218-72377219	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs562058832	chr16:72377224-72377225	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs200893069	chr16:72377242-72377243	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs529598090	chr16:72377246-72377247	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs200948550	chr16:72377262-72377263	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs548051791	chr16:72377286-72377287	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs111954953	chr16:72377312-72377313	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs112043385	chr16:72377341-72377342	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:68)

Disease	PMID	Source
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	21080181	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Autism	19415332	CNVD
Medulloblastoma	21979893	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Schizophrenia	22958593	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Autism	22495311	CNVD
Wilms tumour	21544195	CNVD
Prostate cancer	18632612	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Breast cancer	17850661	CNVD
Breast cancer	16702952	CNVD
Medulloblastoma	16968546	CNVD
Prostate cancer	19242612	CNVD
Cancer	22429812	CNVD
Ewing''s sarcoma	21437220	CNVD
Ewing''s sarcoma	22429812	CNVD
Melanoma	18172304	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	20837533	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Multiple myeloma	21628407	CNVD
Ovarian cancer	22174824	CNVD
Breast cancer	21858162	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Ewing''s sarcoma	17952124	CNVD
Breast cancer	17001317	CNVD
Breast cancer	17133270	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Breast cancer	17603634	CNVD
Prostate cancer	16573809	CNVD
Chordoma	18071362	CNVD
Prostate cancer	17245344	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Acute myeloid leukemia	16864856	CNVD
Infiltrating lobular breast cancer	19191266	CNVD
T-cell lymphomas	19863542	CNVD
Hepatocellular carcinoma	16750200	CNVD
Medulloblastoma	16783165	CNVD
Neuroblastoma	21899760	CNVD
Lung cancer	18438408	CNVD
Breast cancer	21364760	CNVD
Myelofibrosis	22110671	CNVD
Glioblastoma multiforme	18628472	CNVD
Breast cancer	21806811	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Breast cancer	21509527	CNVD
Melanoma	22183965	CNVD
small cell lung cancer	20016488	CNVD
Ependymoma	18628472	CNVD
Ewing''s sarcoma	18628472	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD

Chromatin state (count:550 , 50 per page) page: 1 2 3 4 5 6 7 ... 11

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:72367200-72389200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr16:72367200-72405000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr16:72367200-72423600	Weak transcription	Thymus	Thymus
4	chr16:72370200-72399600	Weak transcription	Primary B cells from cord blood	blood
5	chr16:72370800-72385000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
6	chr16:72380200-72383000	Weak transcription	Rectal Mucosa Donor 31	rectum
7	chr16:72380800-72381200	Enhancers	Fetal Brain Male	brain
8	chr16:72381000-72381200	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
9	chr16:72381200-72384200	Weak transcription	Dnd41	blood
10	chr16:72381400-72381600	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
11	chr16:72381600-72384000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
12	chr16:72381800-72383200	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
13	chr16:72382400-72383000	ZNF genes & repeats	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
14	chr16:72388400-72389800	Enhancers	Primary neutrophils fromperipheralblood	blood
15	chr16:72388600-72389600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
16	chr16:72389000-72389200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
17	chr16:72389000-72389600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
18	chr16:72389200-72389600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
19	chr16:72389200-72389600	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
20	chr16:72389200-72389600	Enhancers	Muscle Satellite Cultured Cells	--
21	chr16:72389200-72389600	Enhancers	Aorta	Aorta
22	chr16:72389200-72390000	Enhancers	Osteobl	bone
23	chr16:72389600-72390200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
24	chr16:72396400-72397200	Enhancers	HepG2	liver
25	chr16:72396400-72397800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
26	chr16:72396400-72397800	Enhancers	HUVEC	blood vessel
27	chr16:72396600-72397600	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
28	chr16:72396800-72397000	Enhancers	Fetal Kidney	kidney
29	chr16:72396800-72397200	Enhancers	Brain Substantia Nigra	brain
30	chr16:72396800-72397400	Enhancers	Cortex derived primary cultured neurospheres	brain
31	chr16:72396800-72397400	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
32	chr16:72396800-72397400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
33	chr16:72397000-72397200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
34	chr16:72397000-72404600	Weak transcription	Fetal Kidney	kidney
35	chr16:72397200-72400200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
36	chr16:72397200-72413800	Weak transcription	HepG2	liver
37	chr16:72397600-72403400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
38	chr16:72399600-72399800	ZNF genes & repeats	Primary B cells from cord blood	blood
39	chr16:72399600-72402800	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
40	chr16:72400200-72400600	ZNF genes & repeats	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
41	chr16:72400600-72422200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
42	chr16:72400800-72420000	Weak transcription	Monocytes-CD14+_RO01746	blood
43	chr16:72401200-72402000	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
44	chr16:72401400-72408200	Enhancers	HUES64 Cell Line	embryonic stem cell
45	chr16:72401600-72401800	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
46	chr16:72401800-72402200	Enhancers	iPS-15b Cell Line	embryonic stem cell
47	chr16:72401800-72403000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
48	chr16:72402200-72403200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
49	chr16:72402600-72407200	Enhancers	HUES48 Cell Line	embryonic stem cell
50	chr16:72402800-72403200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links