Variant report

Variant	nsv543379
Chromosome Location	chr17:45444530-45491469
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CBX3	chr17:45450400-45450697	K562	blood:	n/a	n/a
2	CBX3	chr17:45450397-45450796	HCT-116	colon:	n/a	n/a
3	CBX3	chr17:45450369-45450751	K562	blood:	n/a	n/a
4	CEBPB	chr17:45482271-45482609	K562	blood:	n/a	chr17:45482429-45482440 chr17:45482429-45482442 chr17:45482429-45482442 chr17:45482431-45482440 chr17:45482431-45482442
5	CEBPB	chr17:45453915-45454146	K562	blood:	n/a	chr17:45454038-45454049
6	CEBPB	chr17:45482316-45482557	A549	lung:	n/a	chr17:45482429-45482440 chr17:45482429-45482442 chr17:45482429-45482442 chr17:45482431-45482440 chr17:45482431-45482442
7	CEBPB	chr17:45482269-45482596	HepG2	liver:	n/a	chr17:45482429-45482440 chr17:45482429-45482442 chr17:45482429-45482442 chr17:45482431-45482440 chr17:45482431-45482442
8	CEBPB	chr17:45482340-45482579	IMR90	lung:	n/a	chr17:45482429-45482440 chr17:45482429-45482442 chr17:45482429-45482442 chr17:45482431-45482440 chr17:45482431-45482442
9	CEBPB	chr17:45453922-45454159	HepG2	liver:	n/a	chr17:45454038-45454049
10	CTCF	chr17:45480860-45481010	HCT-116	colon:	n/a	n/a
11	CTCF	chr17:45480680-45480830	HPAF	blood vessel:	n/a	n/a
12	CTCF	chr17:45480700-45480850	AG09309	skin:	n/a	n/a
13	CTCF	chr17:45480760-45480910	HCT-116	colon:	n/a	n/a
14	CTCF	chr17:45480700-45480850	HCT-116	colon:	n/a	n/a
15	CTCF	chr17:45452673-45452731	GM13976	blood:	n/a	n/a
16	CTCF	chr17:45480760-45480910	A549	lung:	n/a	n/a
17	CTCF	chr17:45482723-45482749	GM10248	blood:	n/a	n/a
18	CTCF	chr17:45480800-45480950	NHDF-neo	bronchial:	n/a	n/a
19	CTCF	chr17:45454572-45454639	MCF-7	breast:	n/a	n/a
20	CTCF	chr17:45454666-45454686	GM10248	blood:	n/a	n/a
21	CTCF	chr17:45450107-45450140	Lung_OC	lung:	n/a	n/a
22	CTCF	chr17:45480800-45480950	AG09319	gingival:	n/a	n/a
23	CUX1	chr17:45477260-45477262	GM12878	blood:	n/a	n/a
24	CUX1	chr17:45490875-45491044	GM12878	blood:	n/a	n/a
25	E2F4	chr17:45453392-45453442	MCF10A-Er-Src	breast:	n/a	n/a
26	E2F4	chr17:45456700-45456892	MCF10A-Er-Src	breast:	n/a	chr17:45456834-45456851
27	E2F4	chr17:45482292-45482492	MCF10A-Er-Src	breast:	n/a	n/a
28	EP300	chr17:45445484-45446186	ECC-1	luminal epithelium:	n/a	n/a
29	FOXA1	chr17:45445608-45445917	T-47D	breast:	n/a	n/a
30	FOXA1	chr17:45445552-45445903	ECC-1	luminal epithelium:	n/a	n/a
31	GATA2	chr17:45475909-45476156	K562	blood:	n/a	n/a
32	GATA3	chr17:45450266-45450287	SH-SY5Y	brain:	n/a	n/a
33	GATA3	chr17:45484716-45485115	SH-SY5Y	brain:	n/a	n/a
34	GATA3	chr17:45472581-45472767	SH-SY5Y	brain:	n/a	n/a
35	GATA3	chr17:45488625-45488791	SH-SY5Y	brain:	n/a	n/a
36	GATA3	chr17:45465228-45465370	SH-SY5Y	brain:	n/a	n/a
37	GATA3	chr17:45477589-45477864	SH-SY5Y	brain:	n/a	n/a
38	GATA3	chr17:45445650-45445968	T-47D	breast:	n/a	n/a
39	IRF1	chr17:45476995-45476998	K562	blood:	n/a	n/a
40	JUN	chr17:45453645-45454040	HepG2	liver:	n/a	chr17:45453798-45453807 chr17:45453794-45453807
41	JUN	chr17:45450495-45450638	K562	blood:	n/a	n/a
42	JUND	chr17:45453615-45453970	HepG2	liver:	n/a	chr17:45453798-45453807
43	KAP1	chr17:45451403-45452067	K562	blood:	n/a	n/a
44	KAP1	chr17:45449871-45450896	K562	blood:	n/a	n/a
45	KAP1	chr17:45472097-45472297	K562	blood:	n/a	n/a
46	MAFF	chr17:45466577-45466741	HepG2	liver:	n/a	chr17:45466659-45466677
47	MAFF	chr17:45487462-45487639	K562	blood:	n/a	n/a
48	MAFK	chr17:45466540-45466820	HepG2	liver:	n/a	chr17:45466661-45466676
49	MAFK	chr17:45476728-45476760	HepG2	liver:	n/a	n/a
50	MAFK	chr17:45466565-45466817	HepG2	liver:	n/a	chr17:45466661-45466676

No.	Distal block	Cell Line	Cell type
1	chr17:45469114..45472029-chr17:45476038..45478353,2	K562	blood:
2	chr17:45443966..45446911-chr17:45490507..45492639,3	K562	blood:
3	chr17:45463722..45466707-chr17:45470914..45473396,3	K562	blood:
4	chr17:45474211..45476724-chr17:45477326..45478919,2	MCF-7	breast:
5	chr17:45468184..45470293-chr17:45471127..45473354,2	MCF-7	breast:
6	chr17:45443966..45446911-chr17:45490507..45492639,3	K562	blood:
7	chr17:45422002..45424871-chr17:45443232..45445313,2	MCF-7	breast:
8	chr17:45443966..45446911-chr17:45490626..45492639,2	K562	blood:
9	chr17:45474211..45476724-chr17:45477326..45478919,2	MCF-7	breast:
10	chr17:45463722..45466707-chr17:45470914..45473396,3	K562	blood:
11	chr17:45443966..45446911-chr17:45490626..45492639,2	K562	blood:
12	chr17:45485568..45487998-chr17:45490186..45492096,2	K562	blood:
13	chr17:45485568..45487998-chr17:45490186..45492096,2	K562	blood:
14	chr17:45450399..45452853-chr17:45453985..45455878,3	K562	blood:
15	chr17:45445857..45448249-chr17:45449955..45451934,2	MCF-7	breast:
16	chr17:45469114..45472029-chr17:45476038..45478353,2	K562	blood:
17	chr17:45468184..45470293-chr17:45471127..45473354,2	MCF-7	breast:
18	chr17:45450230..45451965-chr17:45515633..45517209,2	K562	blood:
19	chr17:45489885..45492541-chr17:45494163..45496455,2	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ITGB3-1	chr17:45447803-45447874	NONHSAT054302
2	lnc-ITGB3-1	chr17:45451838-45452004	NONHSAT054302
3	lnc-AC040934.1-1	chr17:45486688-45487035	ENSG00000253347.1
4	lnc-ITGB3-1	chr17:45446982-45447290	NONHSAT054302

Variant related genes	Relation type
EFCAB13	TF binding region
ENSG00000178852	chromatin interactions

Extended variants
information (count: 1592 )
Associated
traits (count: 118 )

Variant overlapped rSNPs/rCNVs (count:1592 , 50 per page) page: 1 2 3 4 5 6 7 ... 32

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs78750895	chr17:45444611-45444612	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs553562557	chr17:45444618-45444619	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs573733523	chr17:45444634-45444635	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs58890677	chr17:45444651-45444652	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
5	rs563039692	chr17:45444657-45444658	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs531697855	chr17:45444671-45444672	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs187400393	chr17:45444742-45444743	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs546115922	chr17:45444746-45444747	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs189915606	chr17:45444750-45444751	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs528005646	chr17:45444751-45444752	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs548068854	chr17:45444766-45444767	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs73985160	chr17:45444815-45444816	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
13	rs530363805	chr17:45444816-45444817	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs113109264	chr17:45444853-45444854	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs568964272	chr17:45444863-45444864	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs377418129	chr17:45444864-45444865	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs10514925	chr17:45444868-45444869	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
18	rs570871805	chr17:45444878-45444879	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs533839323	chr17:45444882-45444883	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs553698246	chr17:45444883-45444884	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs115547871	chr17:45444897-45444898	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs140100934	chr17:45444922-45444923	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs149838814	chr17:45444959-45444960	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs576503324	chr17:45444971-45444972	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs79813522	chr17:45445022-45445023	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs565287722	chr17:45445031-45445032	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs572421473	chr17:45445044-45445045	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs375661152	chr17:45445065-45445066	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs541432428	chr17:45445083-45445084	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs561663580	chr17:45445120-45445121	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs530310587	chr17:45445129-45445130	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs550374065	chr17:45445160-45445161	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs16941923	chr17:45445177-45445178	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
34	rs531447051	chr17:45445183-45445184	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs114310019	chr17:45445201-45445202	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs9889709	chr17:45445229-45445230	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
37	rs145876043	chr17:45445306-45445307	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs573997277	chr17:45445337-45445338	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs546974186	chr17:45445397-45445398	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs537824094	chr17:45445427-45445428	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs556271049	chr17:45445428-45445429	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs76186063	chr17:45445440-45445441	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs182595930	chr17:45445487-45445488	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
44	rs556339444	chr17:45445571-45445572	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
45	rs576114316	chr17:45445605-45445606	Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
46	rs539137661	chr17:45445615-45445616	Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
47	rs559138692	chr17:45445616-45445617	Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
48	rs371806120	chr17:45445676-45445677	Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
49	rs541469234	chr17:45445699-45445700	Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
50	rs561101981	chr17:45445724-45445725	Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:118)

Disease	PMID	Source
Ewing''s sarcoma	21437220	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	21080181	CNVD
Ovarian cancer	22174824	CNVD
Melanoma	18172304	CNVD
Moyamoya disease	22323933	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Ovarian cancer	21781307	CNVD
Colorectal cancer	21645411	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Medulloblastoma	21979893	CNVD
Cancer	20164919	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Hodgkin''s lymphoma	17606441	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute myeloid leukemia	20729466	CNVD
T-cell lymphomas	19863542	CNVD
Cancer	16751803	CNVD
Chordoma	21602918	CNVD
Neurofibromatosis	20686819	CNVD
Peripheral nerve sheath tumors	20686819	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Cancer	21499728	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Medulloblastoma	21292688	CNVD
Neuroblastoma	18923524	CNVD
Neuroblastoma	17897457	CNVD
Neuroblastoma	17327916	CNVD
Breast cancer	21264507	CNVD
Endometrial cancer	22040021	CNVD
Neuroblastoma	21484798	CNVD
Breast cancer	22028636	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Acute myeloid leukemia	20724749	CNVD
Breast cancer	21858162	CNVD
lymphocytic leukemia	21291569	CNVD
Gastric cancer	17167181	CNVD
Breast cancer	19287154	CNVD
Leukemia	20874852	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Neuroblastoma	18664255	CNVD
Neuroblastoma	17533364	CNVD
Human rectal carcinomas	16397240	CNVD
Metanephric adenoma	20802469	CNVD
Breast cancer	16608533	CNVD
Breast cancer	17457667	CNVD
Breast cancer	16951389	CNVD
Basal cell lymphoma	17053054	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	22048815	CNVD
Breast cancer	17603634	CNVD
Follicular lymphoma	20505157	CNVD
Non-small cell lung cancer	20864512	CNVD
Cancer	21183584	CNVD
Cervical cancer	21062161	CNVD
Breast cancer	20953835	CNVD
Thyroid cancer	19087340	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
Hirschsprung''s Disease	21712996	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
TAR Syndrome	17847015	CNVD
Neuroblastoma	18923191	CNVD
Breast cancer	17850661	CNVD
Breast cancer	19261255	CNVD
Lung cancer	16773561	CNVD
Neurocytoma	17123091	CNVD
Central neurocytomas	17123091	CNVD
Basal-like breast cancer	18066063	CNVD
Breast cancer	20031965	CNVD
Colorectal cancer	19287155	CNVD
Hereditary breast	19566914	CNVD
Ovarian cancer	19047089	CNVD
Ovarian cancer	19566914	CNVD
Triple-negative breast cancer	18950515	CNVD
Breast cancer	16846527	CNVD
Bladder cancer	21909424	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Ewing''s sarcoma	18628472	CNVD
Glioblastoma multiforme	18628472	CNVD
Leukemia	18628472	CNVD
Acute myeloid leukemia	21251322	CNVD
Ewing''s sarcoma	22429812	CNVD
Prostate cancer	18632612	CNVD
Lung cancer	18438408	CNVD
Breast cancer	21364760	CNVD
Urothelial carcinoma	21177765	CNVD
Breast cancer	17142309	CNVD
Breast cancer	16397240	CNVD
Ovarian clear cell carcinoma	19293255	CNVD
Myelofibrosis	22110671	CNVD
Prostate cancer	17217626	CNVD
Non-syndromic sensorineural hearing loss	21084979	CNVD
Autism	22817714	CNVD
Breast cancer	20409316	CNVD
Cancer	17160897	CNVD
Frontotemporal lobar degeneration	19640594	CNVD
Malignant mesothelioma	18160781	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Breast cancer	21509527	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD

Chromatin state (count:166 , 50 per page) page: 1 2 3 4

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr17:45402200-45446400	Weak transcription	Colon Smooth Muscle	Colon
2	chr17:45402200-45500800	Weak transcription	Aorta	Aorta
3	chr17:45411600-45468200	Weak transcription	Left Ventricle	heart
4	chr17:45412400-45463400	Weak transcription	Gastric	stomach
5	chr17:45413400-45463800	Weak transcription	Ovary	ovary
6	chr17:45421800-45449800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
7	chr17:45423000-45450000	Weak transcription	Duodenum Smooth Muscle	Duodenum
8	chr17:45423000-45465400	Weak transcription	Adipose Nuclei	Adipose
9	chr17:45423200-45450000	Weak transcription	Primary B cells from cord blood	blood
10	chr17:45435000-45463200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
11	chr17:45435200-45447600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
12	chr17:45435400-45449600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
13	chr17:45440600-45457200	Weak transcription	Fetal Intestine Small	intestine
14	chr17:45440800-45449400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
15	chr17:45440800-45449800	Weak transcription	Primary T helper cells fromperipheralblood	blood
16	chr17:45442600-45449400	Weak transcription	Primary B cells from peripheral blood	blood
17	chr17:45442800-45449800	Weak transcription	Primary hematopoietic stem cells	blood
18	chr17:45444600-45445400	Enhancers	Esophagus	oesophagus
19	chr17:45445600-45446000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
20	chr17:45445600-45447800	Enhancers	Pancreatic Islets	Pancreatic Islet
21	chr17:45449400-45451000	ZNF genes & repeats	Primary B cells from peripheral blood	blood
22	chr17:45449400-45451600	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
23	chr17:45449600-45451000	ZNF genes & repeats	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
24	chr17:45449800-45450800	ZNF genes & repeats	Primary T helper cells fromperipheralblood	blood
25	chr17:45449800-45451000	ZNF genes & repeats	Primary hematopoietic stem cells	blood
26	chr17:45450000-45450400	ZNF genes & repeats	Duodenum Smooth Muscle	Duodenum
27	chr17:45450000-45451000	ZNF genes & repeats	Primary B cells from cord blood	blood
28	chr17:45450400-45461000	Weak transcription	Duodenum Smooth Muscle	Duodenum
29	chr17:45450800-45470400	Weak transcription	Liver	Liver
30	chr17:45451000-45455400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
31	chr17:45451000-45460000	Weak transcription	Primary hematopoietic stem cells	blood
32	chr17:45451000-45463000	Weak transcription	Primary B cells from peripheral blood	blood
33	chr17:45451000-45463400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
34	chr17:45451000-45464600	Weak transcription	Primary B cells from cord blood	blood
35	chr17:45451600-45453200	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
36	chr17:45453200-45454000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
37	chr17:45454000-45454400	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
38	chr17:45454400-45458800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
39	chr17:45455400-45456200	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
40	chr17:45456200-45459200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
41	chr17:45458800-45459200	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
42	chr17:45459200-45460200	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
43	chr17:45460000-45460400	ZNF genes & repeats	Primary hematopoietic stem cells	blood
44	chr17:45460200-45460400	ZNF genes & repeats	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
45	chr17:45460400-45462800	Weak transcription	Primary hematopoietic stem cells	blood
46	chr17:45460600-45467400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
47	chr17:45460800-45463200	Weak transcription	Lung	lung
48	chr17:45460800-45466600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
49	chr17:45461000-45461400	ZNF genes & repeats	Duodenum Smooth Muscle	Duodenum
50	chr17:45461000-45461600	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links