Variant report

Variant nsv544054
Chromosome Location chr19:52147399-52271247
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:2976 , 50 per page) page: 1 2 3 4 5 6 7 ... 60
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:52143600-52147800 Genic enhancers Primary monocytes fromperipheralblood blood
2 chr19:52143600-52147800 Genic enhancers Primary B cells from peripheral blood blood
3 chr19:52145400-52148000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
4 chr19:52145600-52147800 Enhancers Primary B cells from cord blood blood
5 chr19:52145600-52147800 Transcr. at gene 5' and 3' Monocytes-CD14+_RO01746 blood
6 chr19:52146400-52147800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
7 chr19:52146400-52148400 Enhancers Primary Natural Killer cells fromperipheralblood blood
8 chr19:52146800-52147800 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
9 chr19:52146800-52148000 Genic enhancers Spleen Spleen
10 chr19:52146800-52150200 Active TSS Primary neutrophils fromperipheralblood blood
11 chr19:52147200-52147400 Enhancers Lung lung
12 chr19:52147200-52148200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
13 chr19:52147200-52153400 Weak transcription Right Atrium heart
14 chr19:52147400-52147600 Bivalent Enhancer Skeletal Muscle Female skeletal muscle
15 chr19:52147400-52149200 Enhancers GM12878-XiMat blood
16 chr19:52147600-52147800 Bivalent Enhancer Rectal Mucosa Donor 29 rectum
17 chr19:52147600-52147800 Enhancers Rectal Mucosa Donor 31 rectum
18 chr19:52147600-52148000 Enhancers Primary hematopoietic stem cells short term culture blood
19 chr19:52147800-52148000 Genic enhancers Primary mononuclear cells fromperipheralblood Blood
20 chr19:52147800-52148000 Flanking Bivalent TSS/Enh Rectal Mucosa Donor 29 rectum
21 chr19:52147800-52148200 Transcr. at gene 5' and 3' Primary monocytes fromperipheralblood blood
22 chr19:52147800-52148200 Bivalent/Poised TSS Brain Anterior Caudate brain
23 chr19:52147800-52148400 Enhancers H9 Cell Line embryonic stem cell
24 chr19:52147800-52148400 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
25 chr19:52147800-52148400 Flanking Active TSS Monocytes-CD14+_RO01746 blood
26 chr19:52147800-52149000 Flanking Active TSS Primary B cells from cord blood blood
27 chr19:52147800-52149000 Transcr. at gene 5' and 3' Primary B cells from peripheral blood blood
28 chr19:52147800-52149000 Enhancers Primary hematopoietic stem cells blood
29 chr19:52147800-52149200 Active TSS Brain Substantia Nigra brain
30 chr19:52147800-52149600 Active TSS Thymus Thymus
31 chr19:52148000-52148200 Bivalent Enhancer ES-WA7 Cell Line embryonic stem cell
32 chr19:52148000-52148200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr19:52148000-52148200 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
34 chr19:52148000-52148200 Flanking Active TSS Rectal Mucosa Donor 29 rectum
35 chr19:52148000-52148200 Bivalent Enhancer HepG2 liver
36 chr19:52148000-52148400 Weak transcription Primary hematopoietic stem cells short term culture blood
37 chr19:52148000-52148600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
38 chr19:52148000-52148600 Weak transcription Spleen Spleen
39 chr19:52148200-52148400 Flanking Active TSS Primary monocytes fromperipheralblood blood
40 chr19:52148200-52148400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr19:52148200-52148600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
42 chr19:52148200-52148800 Active TSS Brain Anterior Caudate brain
43 chr19:52148200-52149000 Active TSS Primary mononuclear cells fromperipheralblood Blood
44 chr19:52148200-52149000 Active TSS Rectal Mucosa Donor 29 rectum
45 chr19:52148400-52148600 Active TSS Primary monocytes fromperipheralblood blood
46 chr19:52148400-52148600 Enhancers Primary hematopoietic stem cells short term culture blood
47 chr19:52148400-52148600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
48 chr19:52148400-52148600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
49 chr19:52148400-52149000 Bivalent/Poised TSS Brain Inferior Temporal Lobe brain
50 chr19:52148400-52149200 Bivalent/Poised TSS Brain Hippocampus Middle brain

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