Variant report

Variant nsv544090
Chromosome Location chr19:56384193-56538729
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:56412400-56413200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
2 chr19:56419000-56419400 ZNF genes & repeats H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr19:56421400-56421600 ZNF genes & repeats Pancreatic Islets Pancreatic Islet
4 chr19:56423600-56424600 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
5 chr19:56442400-56443000 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
6 chr19:56463600-56464400 ZNF genes & repeats iPS-18 Cell Line embryonic stem cell
7 chr19:56468000-56468200 Bivalent Enhancer HepG2 liver
8 chr19:56482000-56482400 Bivalent/Poised TSS ES-UCSF4 Cell Line embryonic stem cell
9 chr19:56485200-56486600 Enhancers Brain Hippocampus Middle brain
10 chr19:56486200-56487000 Enhancers Brain Dorsolateral Prefrontal Cortex brain
11 chr19:56486400-56486800 Flanking Active TSS Brain Anterior Caudate brain
12 chr19:56495800-56496400 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
13 chr19:56496000-56496200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr19:56496200-56497600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr19:56496400-56497600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
16 chr19:56497600-56498000 Bivalent/Poised TSS Breast Myoepithelial Primary Cells Breast
17 chr19:56497600-56498200 ZNF genes & repeats H1 Derived Mesenchymal Stem Cells ES cell derived
18 chr19:56497600-56498200 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
19 chr19:56497800-56498200 ZNF genes & repeats Pancreas Pancrea
20 chr19:56502400-56502800 Enhancers Hela-S3 cervix
21 chr19:56504600-56504800 Active TSS HSMM muscle
22 chr19:56504600-56504800 Weak transcription HSMMtube muscle
23 chr19:56504600-56505000 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
24 chr19:56504600-56505000 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
25 chr19:56504600-56505000 ZNF genes & repeats NHEK skin
26 chr19:56504800-56505000 Enhancers HSMMtube muscle
27 chr19:56504800-56505200 Flanking Active TSS HSMM muscle
28 chr19:56504800-56505600 ZNF genes & repeats iPS-18 Cell Line embryonic stem cell
29 chr19:56504800-56505600 Active TSS GM12878-XiMat blood
30 chr19:56505000-56505800 Weak transcription HSMMtube muscle
31 chr19:56519000-56519400 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
32 chr19:56521200-56521600 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
33 chr19:56521400-56521600 Bivalent/Poised TSS Hela-S3 cervix
34 chr19:56538000-56540200 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
35 chr19:56538200-56538800 ZNF genes & repeats H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr19:56538400-56538600 Bivalent/Poised TSS Hela-S3 cervix
37 chr19:56538600-56539200 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell

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